RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 ZNF224Q9NZL3 707 aa15.38■□□□□ 0.05
UPF3A-206ENST00000480362 SIRT4Q9Y6E7 314 aaPredicted RBP15.38■□□□□ 0.05
UPF3A-206ENST00000480362 CACNA1BQ00975 2339 aa15.38■□□□□ 0.05
UPF3A-206ENST00000480362 ATRXP46100 2492 aa15.37■□□□□ 0.05
UPF3A-206ENST00000480362 PNMA8CA0A1B0GUJ8 204 aa15.37■□□□□ 0.05
UPF3A-206ENST00000480362 A6NHS1 94 aa15.37■□□□□ 0.05
UPF3A-206ENST00000480362 ZNF878C9JN71 531 aa15.37■□□□□ 0.05
UPF3A-206ENST00000480362 H3BSA7 217 aa15.37■□□□□ 0.05
UPF3A-206ENST00000480362 DVL2O14641 736 aa15.37■□□□□ 0.05
UPF3A-206ENST00000480362 SGCEO43556 437 aa15.37■□□□□ 0.05
UPF3A-206ENST00000480362 HLA-HP01893 362 aa15.37■□□□□ 0.05
UPF3A-206ENST00000480362 MMP7P09237 267 aaPredicted RBP15.37■□□□□ 0.05
UPF3A-206ENST00000480362 CPEP16870 476 aa15.37■□□□□ 0.05
UPF3A-206ENST00000480362 RGS6P49758 472 aa15.37■□□□□ 0.05
UPF3A-206ENST00000480362 TAS2R43P59537 309 aa15.37■□□□□ 0.05
UPF3A-206ENST00000480362 PSG4Q00888 419 aa15.37■□□□□ 0.05
UPF3A-206ENST00000480362 TLE1Q04724 770 aa15.37■□□□□ 0.05
UPF3A-206ENST00000480362 SSX1Q16384 188 aa15.37■□□□□ 0.05
UPF3A-206ENST00000480362 TBRG1Q3YBR2 411 aa15.37■□□□□ 0.05
UPF3A-206ENST00000480362 ELFN2Q5R3F8 820 aa15.37■□□□□ 0.05
UPF3A-206ENST00000480362 LIPKQ5VXJ0 399 aa15.37■□□□□ 0.05
UPF3A-206ENST00000480362 RHOUQ7L0Q8 258 aa15.37■□□□□ 0.05
UPF3A-206ENST00000480362 UFD1Q92890 307 aa15.37■□□□□ 0.05
UPF3A-206ENST00000480362 RNF166Q96A37 237 aaPredicted RBP15.37■□□□□ 0.05
UPF3A-206ENST00000480362 OR2H1Q9GZK4 316 aa15.37■□□□□ 0.05
UPF3A-206ENST00000480362 GALNT8Q9NY28 637 aa15.37■□□□□ 0.05
UPF3A-206ENST00000480362 PLEK2Q9NYT0 353 aa15.37■□□□□ 0.05
UPF3A-206ENST00000480362 ST6GALNAC2Q9UJ37 374 aa15.37■□□□□ 0.05
UPF3A-206ENST00000480362 FBXL3Q9UKT7 428 aa15.37■□□□□ 0.05
UPF3A-206ENST00000480362 SLC5A6Q9Y289 635 aa15.37■□□□□ 0.05
UPF3A-206ENST00000480362 USP24Q9UPU5 2620 aa15.36■□□□□ 0.05
UPF3A-206ENST00000480362 A8MXE2 369 aa15.36■□□□□ 0.05
UPF3A-206ENST00000480362 EEF1E1-BLOC1S5C9J1V9 151 aa15.36■□□□□ 0.05
UPF3A-206ENST00000480362 CCRL2O00421 344 aa15.36■□□□□ 0.05
UPF3A-206ENST00000480362 OGG1O15527 345 aa15.36■□□□□ 0.05
UPF3A-206ENST00000480362 EEF1E1O43324 174 aaKnown RBP15.36■□□□□ 0.05
UPF3A-206ENST00000480362 CD79AP11912 226 aa15.36■□□□□ 0.05
UPF3A-206ENST00000480362 CD36P16671 472 aa15.36■□□□□ 0.05
UPF3A-206ENST00000480362 CELP19835 753 aa15.36■□□□□ 0.05
UPF3A-206ENST00000480362 TGFBR2P37173 567 aa15.36■□□□□ 0.05
UPF3A-206ENST00000480362 TUBA1BP68363 451 aa15.36■□□□□ 0.05
UPF3A-206ENST00000480362 MRPL28Q13084 256 aaKnown RBP15.36■□□□□ 0.05
UPF3A-206ENST00000480362 RAB35Q15286 201 aa15.36■□□□□ 0.05
UPF3A-206ENST00000480362 IGFBP7Q16270 282 aa15.36■□□□□ 0.05
UPF3A-206ENST00000480362 SFRP5Q5T4F7 317 aa15.36■□□□□ 0.05
UPF3A-206ENST00000480362 GPR107Q5VW38 600 aa15.36■□□□□ 0.05
UPF3A-206ENST00000480362 ZNF774Q6NX45 483 aa15.36■□□□□ 0.05
UPF3A-206ENST00000480362 TUBA1AQ71U36 451 aa15.36■□□□□ 0.05
UPF3A-206ENST00000480362 DPPA2Q7Z7J5 298 aa15.36■□□□□ 0.05
UPF3A-206ENST00000480362 MRGPRGQ86SM5 289 aa15.36■□□□□ 0.05
UPF3A-206ENST00000480362 PHC2Q8IXK0 858 aa15.36■□□□□ 0.05
UPF3A-206ENST00000480362 GALNT11Q8NCW6 608 aa15.36■□□□□ 0.05
UPF3A-206ENST00000480362 C1orf162Q8NEQ5 155 aaPredicted RBP15.36■□□□□ 0.05
UPF3A-206ENST00000480362 AKR7LQ8NHP1 331 aa15.36■□□□□ 0.05
UPF3A-206ENST00000480362 BOD1Q96IK1 185 aa15.36■□□□□ 0.05
UPF3A-206ENST00000480362 ATF6BQ99941 703 aa15.36■□□□□ 0.05
UPF3A-206ENST00000480362 WNT5BQ9H1J7 359 aa15.36■□□□□ 0.05
UPF3A-206ENST00000480362 ITPR1Q14643 2758 aa15.36■□□□□ 0.05
UPF3A-206ENST00000480362 INTS1Q8N201 2190 aaKnown RBP15.35■□□□□ 0.05
UPF3A-206ENST00000480362 ZNF503-AS2A6NEH8 195 aa15.35■□□□□ 0.05
UPF3A-206ENST00000480362 SYNGR3O43761 229 aa15.35■□□□□ 0.05
UPF3A-206ENST00000480362 DOK2O60496 412 aa15.35■□□□□ 0.05
UPF3A-206ENST00000480362 PRB1P04280 392 aa15.35■□□□□ 0.05
UPF3A-206ENST00000480362 HSD11B1P28845 292 aa15.35■□□□□ 0.05
UPF3A-206ENST00000480362 ARR3P36575 388 aa15.35■□□□□ 0.05
UPF3A-206ENST00000480362 TGM4P49221 684 aa15.35■□□□□ 0.05
UPF3A-206ENST00000480362 RAB1AP62820 205 aa15.35■□□□□ 0.05
UPF3A-206ENST00000480362 GRB2P62993 217 aaKnown RBP15.35■□□□□ 0.05
UPF3A-206ENST00000480362 GPR50Q13585 617 aa15.35■□□□□ 0.05
UPF3A-206ENST00000480362 CCDC58Q4VC31 144 aa15.35■□□□□ 0.05
UPF3A-206ENST00000480362 PABPC1L2AQ5JQF8 200 aa15.35■□□□□ 0.05
UPF3A-206ENST00000480362 TMEM53Q6P2H8 277 aa15.35■□□□□ 0.05
UPF3A-206ENST00000480362 RPL22L1Q6P5R6 122 aaKnown RBP15.35■□□□□ 0.05
UPF3A-206ENST00000480362 ARL9Q6T311 187 aa15.35■□□□□ 0.05
UPF3A-206ENST00000480362 BHLHA15Q7RTS1 189 aaPredicted RBP15.35■□□□□ 0.05
UPF3A-206ENST00000480362 FJX1Q86VR8 437 aa15.35■□□□□ 0.05
UPF3A-206ENST00000480362 CLVS1Q8IUQ0 354 aaPredicted RBP15.35■□□□□ 0.05
UPF3A-206ENST00000480362 RELL2Q8NC24 303 aaPredicted RBP15.35■□□□□ 0.05
UPF3A-206ENST00000480362 OR1F12Q8NHA8 337 aa15.35■□□□□ 0.05
UPF3A-206ENST00000480362 HAVCR2Q8TDQ0 301 aa15.35■□□□□ 0.05
UPF3A-206ENST00000480362 NANOS1Q8WY41 292 aaKnown RBP15.35■□□□□ 0.05
UPF3A-206ENST00000480362 HSD17B8Q92506 261 aa15.35■□□□□ 0.05
UPF3A-206ENST00000480362 FUNDC2Q9BWH2 189 aa15.35■□□□□ 0.05
UPF3A-206ENST00000480362 HDHD2Q9H0R4 259 aa15.35■□□□□ 0.05
UPF3A-206ENST00000480362 NIPAL2Q9H841 368 aa15.35■□□□□ 0.05
UPF3A-206ENST00000480362 DDX28Q9NUL7 540 aaKnown RBP15.35■□□□□ 0.05
UPF3A-206ENST00000480362 B3GNT2Q9NY97 397 aa15.35■□□□□ 0.05
UPF3A-206ENST00000480362 NDUFA13Q9P0J0 144 aa15.35■□□□□ 0.05
UPF3A-206ENST00000480362 NCOA6Q14686 2063 aaPredicted RBP15.35■□□□□ 0.05
UPF3A-206ENST00000480362 TRBV2A0A0J9YWF9 115 aa15.34■□□□□ 0.05
UPF3A-206ENST00000480362 SMIM31A0A1B0GVY4 71 aa15.34■□□□□ 0.05
UPF3A-206ENST00000480362 B8ZZF3 427 aa15.34■□□□□ 0.05
UPF3A-206ENST00000480362 LRRTM2O43300 516 aa15.34■□□□□ 0.05
UPF3A-206ENST00000480362 PLPP2O43688 288 aa15.34■□□□□ 0.05
UPF3A-206ENST00000480362 UBL3O95164 117 aa15.34■□□□□ 0.05
UPF3A-206ENST00000480362 PNPP00491 289 aa15.34■□□□□ 0.05
UPF3A-206ENST00000480362 HOXB1P14653 301 aaPredicted RBP15.34■□□□□ 0.05
UPF3A-206ENST00000480362 GNLYP22749 145 aa15.34■□□□□ 0.05
UPF3A-206ENST00000480362 DCTDP32321 178 aa15.34■□□□□ 0.05
UPF3A-206ENST00000480362 PRKXP51817 358 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms