RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 TNK1Q13470 666 aa13.67□□□□□ -0.22
LIMS2-213ENST00000469300 SHBQ15464 509 aa13.67□□□□□ -0.22
LIMS2-213ENST00000469300 AVPI1Q5T686 147 aa13.67□□□□□ -0.22
LIMS2-213ENST00000469300 STEAP3Q658P3 488 aa13.67□□□□□ -0.22
LIMS2-213ENST00000469300 OR2Y1Q8NGV0 311 aa13.67□□□□□ -0.22
LIMS2-213ENST00000469300 RBPMSQ93062 196 aaKnown RBP13.67□□□□□ -0.22
LIMS2-213ENST00000469300 C21orf140B9A014 251 aa13.67□□□□□ -0.22
LIMS2-213ENST00000469300 GIFP27352 417 aa13.67□□□□□ -0.22
LIMS2-213ENST00000469300 SSTR2P30874 369 aa13.67□□□□□ -0.22
LIMS2-213ENST00000469300 S100A7P31151 101 aa13.67□□□□□ -0.22
LIMS2-213ENST00000469300 WNT3P56703 355 aa13.67□□□□□ -0.22
LIMS2-213ENST00000469300 UBE2IP63279 158 aaKnown RBP13.67□□□□□ -0.22
LIMS2-213ENST00000469300 BCDIN3DQ7Z5W3 292 aaKnown RBP13.67□□□□□ -0.22
LIMS2-213ENST00000469300 CD163Q86VB7 1156 aa13.67□□□□□ -0.22
LIMS2-213ENST00000469300 ATF6BQ99941 703 aa13.67□□□□□ -0.22
LIMS2-213ENST00000469300 OPA3Q9H6K4 179 aa13.67□□□□□ -0.22
LIMS2-213ENST00000469300 EMC7Q9NPA0 242 aa13.67□□□□□ -0.22
LIMS2-213ENST00000469300 GPATCH2Q9NW75 528 aa13.67□□□□□ -0.22
LIMS2-213ENST00000469300 LRP5LA4QPB2 252 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 ZNF705GA8MUZ8 300 aaPredicted RBP13.66□□□□□ -0.22
LIMS2-213ENST00000469300 IGHV3-9P01782 118 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 CALCBP10092 127 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 M6PRP20645 277 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 IDO2Q6ZQW0 420 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 TMPRSS11FQ6ZWK6 438 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 FAM71CQ8NEG0 241 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 OR11G2Q8NGC1 345 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 SLC25A31Q9H0C2 315 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 ZFP64Q9NPA5 681 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 NIT2Q9NQR4 276 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 LSM5Q9Y4Y9 91 aaKnown RBP13.66□□□□□ -0.22
LIMS2-213ENST00000469300 LOC107986453A0A1B0GWG9 222 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 OTOL1A6NHN0 477 aaPredicted RBP13.66□□□□□ -0.22
LIMS2-213ENST00000469300 TOR1AO14656 332 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 CYC1P08574 325 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 OXA1LQ15070 435 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 TMEM81Q6P7N7 255 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 LHX9Q9NQ69 397 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 LANCL2Q9NS86 450 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 FBXO7Q9Y3I1 522 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 CABIN1Q9Y6J0 2220 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 KIR2DS1A0A191URI9 304 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 MEIS3P1A6NDR6 274 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 NPIPB8E9PQR5 432 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 SPINT2O43291 252 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 TRAPPC2P0DI81 140 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 TRAPPC2BP0DI82 140 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 PSMB1P20618 241 aaKnown RBP13.66□□□□□ -0.22
LIMS2-213ENST00000469300 KIR2DS4P43632 304 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 RAP2BP61225 183 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 KIR2DS1Q14954 304 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 ZNF766Q5HY98 468 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 MBOAT4Q96T53 435 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 ZNF768Q9H5H4 540 aaKnown RBP13.66□□□□□ -0.22
LIMS2-213ENST00000469300 CRLF2Q9HC73 371 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 A6NIN4 97 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 CELA2BP08218 269 aaPredicted RBP13.66□□□□□ -0.22
LIMS2-213ENST00000469300 CLDN6P56747 220 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 PMS2CLQ68D20 193 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 OR5D18Q8NGL1 313 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 MSI2Q96DH6 328 aaKnown RBP13.66□□□□□ -0.22
LIMS2-213ENST00000469300 CLEC2DQ9UHP7 191 aa13.66□□□□□ -0.22
LIMS2-213ENST00000469300 EPHA1P21709 976 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 F2RL1P55085 397 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 RNPS1Q15287 305 aaKnown RBP13.65□□□□□ -0.22
LIMS2-213ENST00000469300 GLIPR1L1Q6UWM5 242 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 APOOLQ6UXV4 268 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 ANGPTL5Q86XS5 388 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 TRIP11Q15643 1979 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 A0A0B4J2E0 115 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 A0A1B0GX12 115 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 APEHP13798 732 aaKnown RBP13.65□□□□□ -0.22
LIMS2-213ENST00000469300 NFYAP23511 347 aaPredicted RBP13.65□□□□□ -0.22
LIMS2-213ENST00000469300 DDOSTP39656 456 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 RAD52P43351 418 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 PEA15Q15121 130 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 OR56B2PQ8NGI1 322 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 OR52N5Q8NH56 324 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 MFRPQ9BY79 579 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 FAM117AQ9C073 453 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 OCEL1Q9H607 264 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 TRGV8A0A0C4DH27 118 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 GDNFP39905 211 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 CLDN12P56749 244 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 OR8G1Q15617 311 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 OR8B8Q15620 311 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 PWWP2BQ6NUJ5 590 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 C1orf87Q8N0U7 546 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 OR51D1Q8NGF3 324 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 PIGTQ969N2 578 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 FAM60AQ9NP50 221 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 EXOSC3Q9NQT5 275 aaKnown RBP13.65□□□□□ -0.22
LIMS2-213ENST00000469300 MED29Q9NX70 200 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 CTXN2P0C2S0 81 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 ZNF74Q16587 644 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 TMEM99Q8N816 258 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 M1APQ8TC57 530 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 DCUN1D4Q92564 292 aa13.65□□□□□ -0.22
LIMS2-213ENST00000469300 DCLRE1CQ96SD1 692 aaKnown RBP13.65□□□□□ -0.22
LIMS2-213ENST00000469300 ABHD6Q9BV23 337 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms