RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 OAZ3Q9UMX2 235 aa15.18■□□□□ 0.02
VPS52-214ENST00000463486 TRIM64A6NGJ6 449 aa15.17■□□□□ 0.02
VPS52-214ENST00000463486 TVP23AA6NH52 213 aa15.17■□□□□ 0.02
VPS52-214ENST00000463486 TRIM64BA6NI03 449 aa15.17■□□□□ 0.02
VPS52-214ENST00000463486 RIIAD1A6NNX1 92 aa15.17■□□□□ 0.02
VPS52-214ENST00000463486 VSTM5A8MXK1 200 aa15.17■□□□□ 0.02
VPS52-214ENST00000463486 F12P00748 615 aaPredicted RBP15.17■□□□□ 0.02
VPS52-214ENST00000463486 IFNGP01579 166 aa15.17■□□□□ 0.02
VPS52-214ENST00000463486 DBHP09172 617 aa15.17■□□□□ 0.02
VPS52-214ENST00000463486 BMP4P12644 408 aa15.17■□□□□ 0.02
VPS52-214ENST00000463486 RPS23P62266 143 aaKnown RBP15.17■□□□□ 0.02
VPS52-214ENST00000463486 EFNB1P98172 346 aa15.17■□□□□ 0.02
VPS52-214ENST00000463486 PPP2R2BQ00005 443 aa15.17■□□□□ 0.02
VPS52-214ENST00000463486 PTGES3Q15185 160 aaKnown RBP15.17■□□□□ 0.02
VPS52-214ENST00000463486 RAB35Q15286 201 aa15.17■□□□□ 0.02
VPS52-214ENST00000463486 LINC00346Q8IVM7 164 aa15.17■□□□□ 0.02
VPS52-214ENST00000463486 ZNF511Q8NB15 262 aa15.17■□□□□ 0.02
VPS52-214ENST00000463486 GJC3Q8NFK1 279 aa15.17■□□□□ 0.02
VPS52-214ENST00000463486 OR10S1Q8NGN2 331 aa15.17■□□□□ 0.02
VPS52-214ENST00000463486 MAP6Q96JE9 813 aa15.17■□□□□ 0.02
VPS52-214ENST00000463486 C4orf45Q96LM5 186 aa15.17■□□□□ 0.02
VPS52-214ENST00000463486 SYT3Q9BQG1 590 aa15.17■□□□□ 0.02
VPS52-214ENST00000463486 BCL2L14Q9BZR8 327 aa15.17■□□□□ 0.02
VPS52-214ENST00000463486 WDR76Q9H967 626 aa15.17■□□□□ 0.02
VPS52-214ENST00000463486 PLEK2Q9NYT0 353 aa15.17■□□□□ 0.02
VPS52-214ENST00000463486 ATPIF1Q9UII2 106 aa15.17■□□□□ 0.02
VPS52-214ENST00000463486 CSPG4Q6UVK1 2322 aa15.17■□□□□ 0.02
VPS52-214ENST00000463486 ANK3Q12955 4377 aaKnown RBP15.17■□□□□ 0.02
VPS52-214ENST00000463486 NF1P21359 2839 aa15.16■□□□□ 0.02
VPS52-214ENST00000463486 LY6HO94772 140 aa15.16■□□□□ 0.02
VPS52-214ENST00000463486 HMGN1P05114 100 aa15.16■□□□□ 0.02
VPS52-214ENST00000463486 CD99P14209 185 aa15.16■□□□□ 0.02
VPS52-214ENST00000463486 ZNF23P17027 643 aa15.16■□□□□ 0.02
VPS52-214ENST00000463486 ZNF3P17036 446 aa15.16■□□□□ 0.02
VPS52-214ENST00000463486 RPS27P42677 84 aaKnown RBP15.16■□□□□ 0.02
VPS52-214ENST00000463486 HTR5AP47898 357 aa15.16■□□□□ 0.02
VPS52-214ENST00000463486 EFNA4P52798 201 aa15.16■□□□□ 0.02
VPS52-214ENST00000463486 ESRRGP62508 458 aa15.16■□□□□ 0.02
VPS52-214ENST00000463486 CLEC12BQ2HXU8 276 aa15.16■□□□□ 0.02
VPS52-214ENST00000463486 TEX30Q5JUR7 227 aa15.16■□□□□ 0.02
VPS52-214ENST00000463486 ELFN2Q5R3F8 820 aa15.16■□□□□ 0.02
VPS52-214ENST00000463486 RGS7BPQ6MZT1 257 aaPredicted RBP15.16■□□□□ 0.02
VPS52-214ENST00000463486 ZFP1Q6P2D0 407 aa15.16■□□□□ 0.02
VPS52-214ENST00000463486 OR1J1Q8NGS3 322 aa15.16■□□□□ 0.02
VPS52-214ENST00000463486 POFUT1Q9H488 388 aa15.16■□□□□ 0.02
VPS52-214ENST00000463486 MARCH7Q9H992 704 aa15.16■□□□□ 0.02
VPS52-214ENST00000463486 BARX1Q9HBU1 254 aaPredicted RBP15.16■□□□□ 0.02
VPS52-214ENST00000463486 HINT3Q9NQE9 182 aaKnown RBP15.16■□□□□ 0.02
VPS52-214ENST00000463486 TBCCD1Q9NVR7 557 aa15.16■□□□□ 0.02
VPS52-214ENST00000463486 KCNG2Q9UJ96 466 aa15.16■□□□□ 0.02
VPS52-214ENST00000463486 COMMD3-BMI1R4GMX3 469 aa15.16■□□□□ 0.02
VPS52-214ENST00000463486 NIPBLQ6KC79 2804 aaeCLIP15.15■□□□□ 0.02
VPS52-214ENST00000463486 SSX4O60224 188 aa15.15■□□□□ 0.02
VPS52-214ENST00000463486 IGHV3-13P01766 116 aa15.15■□□□□ 0.02
VPS52-214ENST00000463486 HLA-DQA2P01906 255 aa15.15■□□□□ 0.02
VPS52-214ENST00000463486 LCKP06239 509 aa15.15■□□□□ 0.02
VPS52-214ENST00000463486 POLR2IP36954 125 aaKnown RBP15.15■□□□□ 0.02
VPS52-214ENST00000463486 MPV17P39210 176 aa15.15■□□□□ 0.02
VPS52-214ENST00000463486 TNK1Q13470 666 aa15.15■□□□□ 0.02
VPS52-214ENST00000463486 MAD2L1BPQ15013 274 aaPredicted RBP15.15■□□□□ 0.02
VPS52-214ENST00000463486 OR10H5Q8NGA6 315 aa15.15■□□□□ 0.02
VPS52-214ENST00000463486 SYNPRQ8TBG9 265 aa15.15■□□□□ 0.02
VPS52-214ENST00000463486 COQ7Q99807 217 aa15.15■□□□□ 0.02
VPS52-214ENST00000463486 CIB1Q99828 191 aa15.15■□□□□ 0.02
VPS52-214ENST00000463486 OSBPL10Q9BXB5 764 aa15.15■□□□□ 0.02
VPS52-214ENST00000463486 KRT84Q9NSB2 600 aa15.15■□□□□ 0.02
VPS52-214ENST00000463486 KIF17Q9P2E2 1029 aa15.15■□□□□ 0.02
VPS52-214ENST00000463486 DUSP13Q9UII6 198 aa15.15■□□□□ 0.02
VPS52-214ENST00000463486 ZFHX3Q15911 3703 aa15.15■□□□□ 0.02
VPS52-214ENST00000463486 NSD1Q96L73 2696 aaPredicted RBP15.14■□□□□ 0.01
VPS52-214ENST00000463486 SAC3D1A6NKF1 404 aa15.14■□□□□ 0.01
VPS52-214ENST00000463486 ZAR1LA6NP61 321 aa15.14■□□□□ 0.01
VPS52-214ENST00000463486 ADRA2AP08913 450 aa15.14■□□□□ 0.01
VPS52-214ENST00000463486 FOSL1P15407 271 aa15.14■□□□□ 0.01
VPS52-214ENST00000463486 SLC2A5P22732 501 aa15.14■□□□□ 0.01
VPS52-214ENST00000463486 FMO3P31513 532 aa15.14■□□□□ 0.01
VPS52-214ENST00000463486 ALDH3B1P43353 468 aa15.14■□□□□ 0.01
VPS52-214ENST00000463486 SPATA46Q5T0L3 261 aa15.14■□□□□ 0.01
VPS52-214ENST00000463486 SLX4IPQ5VYV7 408 aa15.14■□□□□ 0.01
VPS52-214ENST00000463486 MBNL2Q5VZF2 373 aaKnown RBP15.14■□□□□ 0.01
VPS52-214ENST00000463486 PLBD1Q6P4A8 553 aa15.14■□□□□ 0.01
VPS52-214ENST00000463486 COLCA1Q6ZS62 124 aa15.14■□□□□ 0.01
VPS52-214ENST00000463486 CPOQ8IVL8 374 aa15.14■□□□□ 0.01
VPS52-214ENST00000463486 BBS1Q8NFJ9 593 aa15.14■□□□□ 0.01
VPS52-214ENST00000463486 ABHD4Q8TB40 342 aa15.14■□□□□ 0.01
VPS52-214ENST00000463486 SLC25A40Q8TBP6 338 aa15.14■□□□□ 0.01
VPS52-214ENST00000463486 KLF14Q8TD94 323 aaPredicted RBP15.14■□□□□ 0.01
VPS52-214ENST00000463486 COX4I2Q96KJ9 171 aa15.14■□□□□ 0.01
VPS52-214ENST00000463486 RAB3IPQ96QF0 476 aaPredicted RBP15.14■□□□□ 0.01
VPS52-214ENST00000463486 VRK1Q99986 396 aaPredicted RBP15.14■□□□□ 0.01
VPS52-214ENST00000463486 OR2J1Q9GZK6 312 aa15.14■□□□□ 0.01
VPS52-214ENST00000463486 HDHD2Q9H0R4 259 aa15.14■□□□□ 0.01
VPS52-214ENST00000463486 S100A14Q9HCY8 104 aa15.14■□□□□ 0.01
VPS52-214ENST00000463486 EIF3KQ9UBQ5 218 aaKnown RBP15.14■□□□□ 0.01
VPS52-214ENST00000463486 FBXO9Q9UK97 447 aaPredicted RBP15.14■□□□□ 0.01
VPS52-214ENST00000463486 POLR1DQ9Y2S0 133 aa15.14■□□□□ 0.01
VPS52-214ENST00000463486 STARD10Q9Y365 291 aa15.14■□□□□ 0.01
VPS52-214ENST00000463486 A0A096LNT2 108 aa15.13■□□□□ 0.01
VPS52-214ENST00000463486 E9PQ18 207 aa15.13■□□□□ 0.01
VPS52-214ENST00000463486 ZNF593O00488 134 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms