RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 OR5L1Q8NGL2 311 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 SNX33Q8WV41 574 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 ITFG2Q969R8 447 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 FBXO17Q96EF6 278 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 ZC3HAV1LQ96H79 300 aaKnown RBP9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 ATF6BQ99941 703 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 COPS4Q9BT78 406 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 HCAR1Q9BXC0 346 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 BCL2L14Q9BZR8 327 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 EMC7Q9NPA0 242 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 B3GNT2Q9NY97 397 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 GDF2Q9UK05 429 aaPredicted RBP9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 SPENQ96T58 3664 aaKnown RBP9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 M0R1B8 84 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 MRPS14O60783 128 aaKnown RBP9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 SULT1C4O75897 302 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 MPZL1O95297 269 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 CLIC3O95833 236 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 IGLV1-44P01699 117 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 MMP7P09237 267 aaPredicted RBP9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 GNAO1P09471 354 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 FREM3P0C091 2139 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 BMP4P12644 408 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 IGFBP2P18065 325 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 PCSK6P29122 969 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 CCKARP32238 428 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 NAA10P41227 235 aaPredicted RBP9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 ZNF83P51522 516 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 IDH3GP51553 393 aaPredicted RBP9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 FOXG1P55316 489 aaPredicted RBP9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 PSG4Q00888 419 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 GTF3C1Q12789 2109 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 MOGQ16653 247 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 LSRQ86X29 649 aaPredicted RBP9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 BPIFB6Q8NFQ5 453 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 OR1F12Q8NHA8 337 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 LINC01560Q8TB33 94 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 FBLIM1Q8WUP2 373 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 UBE2FQ969M7 185 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 SLAMF6Q96DU3 332 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 TMEM80Q96HE8 168 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 ABHD6Q9BV23 337 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 ADGRL4Q9HBW9 690 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 CENPMQ9NSP4 180 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 FAIMQ9NVQ4 179 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 MRPL22Q9NWU5 206 aaKnown RBP9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 POU2F3Q9UKI9 436 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 EXOGQ9Y2C4 368 aaKnown RBP9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 LRCH1Q9Y2L9 728 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 EXOSC1Q9Y3B2 195 aaKnown RBP9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 LRRC42Q9Y546 428 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 MED12Q93074 2177 aa9.6□□□□□ -0.87
SMNDC1-203ENST00000460483 C5orf49A4QMS7 147 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 CCDC182A6NF36 153 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 ACOD1A6NK06 481 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 M0R129 80 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 RER1O15258 196 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 SELENOFO60613 162 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 MRPL3P09001 348 aaKnown RBP9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 ALOX5APP20292 161 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 CCNOP22674 350 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 CFL1P23528 166 aaKnown RBP9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 EEF1B2P24534 225 aaKnown RBP9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 CD40P25942 277 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 RIDAP52758 137 aaKnown RBP9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 HIST1H3AP68431 136 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 ROM1Q03395 351 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 SRSF1Q07955 248 aaKnown RBP eCLIP9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 MALLQ13021 153 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 CDSNQ15517 529 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 MEP1BQ16820 701 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 ZNF829Q3KNS6 432 aaPredicted RBP9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 HIST2H3PS2Q5TEC6 136 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 SLC22A25Q6T423 547 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 ZNF322Q6U7Q0 402 aaPredicted RBP9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 UGT2A3Q6UWM9 527 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 DRAM2Q6UX65 266 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 HIST2H3AQ71DI3 136 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 VASH1Q7L8A9 365 aaPredicted RBP9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 CDC20BQ86Y33 519 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 ZNF679Q8IYX0 411 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 ZNF786Q8N393 782 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 CNIH3Q8TBE1 160 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 RNF133Q8WVZ7 376 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 FOXN4Q96NZ1 517 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 KCNJ15Q99712 375 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 OPA3Q9H6K4 179 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 FGF20Q9NP95 211 aaPredicted RBP9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 DDX28Q9NUL7 540 aaKnown RBP9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 CRIM1Q9NZV1 1036 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 GPR160Q9UJ42 338 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 ZNF391Q9UJN7 358 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 IKZF2Q9UKS7 526 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 ERGIC3Q9Y282 383 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 MYRFQ9Y2G1 1151 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 RNF115Q9Y4L5 304 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 PCDHGB5Q9Y5G0 923 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 LHFPL6Q9Y693 200 aa9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 PHF3Q92576 2039 aaKnown RBP9.59□□□□□ -0.87
SMNDC1-203ENST00000460483 A0A1W2PR80 420 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms