RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 PDCD1Q15116 288 aa10.09□□□□□ -0.79
DDR1-240ENST00000454612 C1orf140Q5VVS0 124 aa10.09□□□□□ -0.79
DDR1-240ENST00000454612 FAM57BQ71RH2 274 aa10.09□□□□□ -0.79
DDR1-240ENST00000454612 WDR89Q96FK6 387 aaPredicted RBP10.09□□□□□ -0.79
DDR1-240ENST00000454612 SMIM3Q9BZL3 60 aa10.09□□□□□ -0.79
DDR1-240ENST00000454612 S1PR5Q9H228 398 aa10.09□□□□□ -0.79
DDR1-240ENST00000454612 SMOC1Q9H4F8 434 aa10.09□□□□□ -0.79
DDR1-240ENST00000454612 CFAP54Q96N23 3096 aa10.09□□□□□ -0.79
DDR1-240ENST00000454612 SPTBN1Q01082 2364 aaKnown RBP10.09□□□□□ -0.79
DDR1-240ENST00000454612 GDF9O60383 454 aa10.09□□□□□ -0.79
DDR1-240ENST00000454612 ZNF43P17038 809 aa10.09□□□□□ -0.79
DDR1-240ENST00000454612 CAPZBP47756 277 aa10.09□□□□□ -0.79
DDR1-240ENST00000454612 SNRPEP62304 92 aaKnown RBP10.09□□□□□ -0.79
DDR1-240ENST00000454612 RBM39Q14498 530 aaKnown RBP10.09□□□□□ -0.79
DDR1-240ENST00000454612 METTL11BQ5VVY1 283 aa10.09□□□□□ -0.79
DDR1-240ENST00000454612 PTCRAQ6ISU1 281 aaPredicted RBP10.09□□□□□ -0.79
DDR1-240ENST00000454612 HAVCR2Q8TDQ0 301 aa10.09□□□□□ -0.79
DDR1-240ENST00000454612 VSTM2LQ96N03 204 aa10.09□□□□□ -0.79
DDR1-240ENST00000454612 CMSS1Q9BQ75 279 aaKnown RBP10.09□□□□□ -0.79
DDR1-240ENST00000454612 LMF2Q9BU23 707 aaKnown RBP10.09□□□□□ -0.79
DDR1-240ENST00000454612 MMP25Q9NPA2 562 aa10.09□□□□□ -0.79
DDR1-240ENST00000454612 EXOGQ9Y2C4 368 aaKnown RBP10.09□□□□□ -0.79
DDR1-240ENST00000454612 A0A087WV62 115 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 EFCAB7A8K855 629 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 HLA-AP01891 365 aaKnown RBP10.08□□□□□ -0.8
DDR1-240ENST00000454612 PMP2P02689 132 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 TPOP07202 933 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 HOXB5P09067 269 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 S100PP25815 95 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 HSD11B2P80365 405 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 COL19A1Q14993 1142 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 ZNF74Q16587 644 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 C3orf33Q6P1S2 294 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 GSG1LQ6UXU4 331 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 PGAM5Q96HS1 289 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 OR2M2Q96R28 347 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 PRRG4Q9BZD6 226 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 SERINC1Q9NRX5 453 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 FAM221AA4D161 298 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 SDHAP31040 664 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 P2RX1P51575 399 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 FXYD4P59646 89 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 FOXK1P85037 733 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 WDR38Q5JTN6 314 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 OR1M1Q8NGA1 313 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 OR11H4Q8NGC9 324 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 OR1L3Q8NH93 324 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 MED18Q9BUE0 208 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 CHST6Q9GZX3 395 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 FRRS1LQ9P0K9 344 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 MRM2Q9UI43 246 aaKnown RBP10.08□□□□□ -0.8
DDR1-240ENST00000454612 MRPS17Q9Y2R5 130 aaKnown RBP10.08□□□□□ -0.8
DDR1-240ENST00000454612 LRRK1Q38SD2 2015 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 BCAT2O15382 392 aaPredicted RBP10.08□□□□□ -0.8
DDR1-240ENST00000454612 SCRG1O75711 98 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 NSA2O95478 260 aaKnown RBP10.08□□□□□ -0.8
DDR1-240ENST00000454612 SERPINA2P20848 420 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 GABRR1P24046 479 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 AIMP2Q13155 320 aaKnown RBP10.08□□□□□ -0.8
DDR1-240ENST00000454612 SMAD4Q13485 552 aaKnown RBP10.08□□□□□ -0.8
DDR1-240ENST00000454612 PEA15Q15121 130 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 Q3ZCU0 254 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 C19orf48Q6RUI8 117 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 GTPBP8Q8N3Z3 284 aaPredicted RBP10.08□□□□□ -0.8
DDR1-240ENST00000454612 OR4C16Q8NGL9 310 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 PAQR8Q8TEZ7 354 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 TMEM234Q8WY98 164 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 TSPAN32Q96QS1 320 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 INPP5EQ9NRR6 644 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 MIOXQ9UGB7 285 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 HHLA2Q9UM44 414 aa10.08□□□□□ -0.8
DDR1-240ENST00000454612 TLCD2A6NGC4 264 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 IGHA1P01876 353 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 RRASP10301 218 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 DYRK1AQ13627 763 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 HNF4GQ14541 408 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 CYB5R2Q6BCY4 276 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 ADAM5Q6NVV9 412 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 ADGRG3Q86Y34 549 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 GVQW1Q8N7I0 195 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 MARVELD1Q9BSK0 173 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 RARRES3Q9UL19 164 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 TEX13DA0A0J9YY54 714 aaPredicted RBP10.07□□□□□ -0.8
DDR1-240ENST00000454612 SULT2B1O00204 365 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 HSPB6O14558 160 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 NUDT21O43809 227 aaKnown RBP10.07□□□□□ -0.8
DDR1-240ENST00000454612 ZP3P21754 424 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 HTR2CP28335 458 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 CD34P28906 385 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 HSD17B7P56937 341 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 ZNF273Q14593 569 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 DMKNQ6E0U4 476 aaPredicted RBP10.07□□□□□ -0.8
DDR1-240ENST00000454612 H3F3CQ6NXT2 135 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 STEAP1BQ6NZ63 245 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 SLC16A9Q7RTY1 509 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 ZNF546Q86UE3 836 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 ARIH2OSQ8N7S6 290 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 OR51E1Q8TCB6 317 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 PIGTQ969N2 578 aa10.07□□□□□ -0.8
DDR1-240ENST00000454612 SLC41A2Q96JW4 573 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms