RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 SNX13Q9Y5W8 968 aa5□□□□□ -1.61
HLA-DPA3-207ENST00000454398 PPIAL4EA0A075B759 164 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 PPIAL4CA0A0B4J2A2 164 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 TEX13CA0A0J9YWL9 993 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 A0A1B0GW55 424 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 C5orf63A6NC05 138 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 ERICH4A6NGS2 130 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 SRRM5B3KS81 715 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 PPIAL4DF5H284 164 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 CLDN34H7C241 214 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 FBP2O00757 339 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 CDC42EP2O14613 210 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 ANGPT2O15123 496 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 RER1O15258 196 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 SGCEO43556 437 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 MELTFP08582 738 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 CST2P09228 141 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 DUX4L2P0CJ85 424 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 DUX4L3P0CJ86 424 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 DUX4L4P0CJ87 422 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 DUX4L5P0CJ88 424 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 DUX4L6P0CJ89 424 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 DUX4L7P0CJ90 424 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 PPIAL4FP0DN26 164 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 TNFSF4P23510 183 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 PMELP40967 661 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 MTNR1AP48039 350 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 MRPL19P49406 292 aaKnown RBP4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 ARHGDIAP52565 204 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 ZNF133P52736 654 aaPredicted RBP4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 CTXN1P60606 82 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 RPL27P61353 136 aaKnown RBP4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 PAX8Q06710 450 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 FHL1Q13642 323 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 FAM27BQ5VT28 67 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 SLC27A4Q6P1M0 643 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 C16orf87Q6PH81 154 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 CORO6Q6QEF8 472 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 DUX4L9Q6RFH8 374 aaPredicted RBP4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 ARL9Q6T311 187 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 BTNL3Q6UXE8 466 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 VTCN1Q7Z7D3 282 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 PATL1Q86TB9 770 aaKnown RBP4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 LRRC28Q86X40 367 aaPredicted RBP4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 NRMQ8IXM6 262 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 C1orf174Q8IYL3 243 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 FITM2Q8N6M3 262 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 LRRC75AQ8NAA5 344 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 FAM110DQ8TAY7 271 aaPredicted RBP4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 BPIFA2Q96DR5 249 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 TPD52L3Q96J77 140 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 MPP4Q96JB8 637 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 Q96M85 177 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 C7orf26Q96N11 449 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 TBX15Q96SF7 602 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 GPA33Q99795 319 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 CITED1Q99966 193 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 RBM4BQ9BQ04 359 aaKnown RBP4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 NUDT16L1Q9BRJ7 211 aaKnown RBP4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 TMEM246Q9BRR3 403 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 SLC19A3Q9BZV2 496 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 TXNIPQ9H3M7 391 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 SMURF2Q9HAU4 748 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 CYSLTR2Q9NS75 346 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 MAN2C1Q9NTJ4 1040 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 DUX4Q9UBX2 424 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 RIMS3Q9UJD0 308 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 KLHL21Q9UJP4 597 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 ZDHHC8Q9ULC8 765 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 LRCH1Q9Y2L9 728 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 POLR1DQ9Y2S0 133 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 ZNF281Q9Y2X9 895 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 MED31Q9Y3C7 131 aa4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 DYNC2H1Q8NCM8 4307 aaKnown RBP4.99□□□□□ -1.61
HLA-DPA3-207ENST00000454398 TET2Q6N021 2002 aaPredicted RBP4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 A0A0U1RQK1 487 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 A0A1W2PRD5 423 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 A0A1W2PRF3 423 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 A0A1W2PRM7 423 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 OR6C6A6NF89 314 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 C12orf71A8MTZ7 269 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 VGLL3A8MV65 326 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 G3V4G9 280 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 H3BSA7 217 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 SOCS2O14508 198 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 GPR137BO60478 399 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 ICMTO60725 284 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 FAM20BO75063 409 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 ERLIN1O75477 346 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 OR5F1O95221 314 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 TFF1P04155 84 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 WNT2P09544 360 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 TNFRSF1AP19438 455 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 KITLGP21583 273 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 RPL4P36578 427 aaKnown RBP4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 CFHR2P36980 270 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 GZMMP51124 257 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 GUCY1A3Q02108 690 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 POU4F2Q12837 409 aa4.98□□□□□ -1.61
HLA-DPA3-207ENST00000454398 KRR1Q13601 381 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms