RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 CLN8Q9UBY8 286 aa10.41□□□□□ -0.74
AC004540.1-204ENST00000449537 ANGPT4Q9Y264 503 aa10.41□□□□□ -0.74
AC004540.1-204ENST00000449537 ZNF879B4DU55 563 aa10.4□□□□□ -0.74
AC004540.1-204ENST00000449537 MS4A18H0YCH9 400 aa10.4□□□□□ -0.74
AC004540.1-204ENST00000449537 HMGN4O00479 90 aa10.4□□□□□ -0.74
AC004540.1-204ENST00000449537 OR2T1O43869 369 aa10.4□□□□□ -0.74
AC004540.1-204ENST00000449537 F13BP05160 661 aa10.4□□□□□ -0.74
AC004540.1-204ENST00000449537 LIPFP07098 398 aa10.4□□□□□ -0.74
AC004540.1-204ENST00000449537 HLA-DOBP13765 273 aa10.4□□□□□ -0.74
AC004540.1-204ENST00000449537 APLNRP35414 380 aa10.4□□□□□ -0.74
AC004540.1-204ENST00000449537 KIR2DS4P43632 304 aa10.4□□□□□ -0.74
AC004540.1-204ENST00000449537 SLC7A2P52569 658 aa10.4□□□□□ -0.74
AC004540.1-204ENST00000449537 MTPNP58546 118 aa10.4□□□□□ -0.74
AC004540.1-204ENST00000449537 MS4A18Q3C1V0 323 aa10.4□□□□□ -0.74
AC004540.1-204ENST00000449537 SLC36A2Q495M3 483 aa10.4□□□□□ -0.74
AC004540.1-204ENST00000449537 DEFB107AQ8IZN7 70 aa10.4□□□□□ -0.74
AC004540.1-204ENST00000449537 OR2T12Q8NG77 320 aa10.4□□□□□ -0.74
AC004540.1-204ENST00000449537 BBS10Q8TAM1 723 aa10.4□□□□□ -0.74
AC004540.1-204ENST00000449537 LHX4Q969G2 390 aa10.4□□□□□ -0.74
AC004540.1-204ENST00000449537 OR2J1Q9GZK6 312 aa10.4□□□□□ -0.74
AC004540.1-204ENST00000449537 MTHFD2LQ9H903 347 aaPredicted RBP10.4□□□□□ -0.74
AC004540.1-204ENST00000449537 RLIMQ9NVW2 624 aa10.4□□□□□ -0.74
AC004540.1-204ENST00000449537 TAS2R1Q9NYW7 299 aa10.4□□□□□ -0.74
AC004540.1-204ENST00000449537 NKX1-2Q9UD57 310 aaPredicted RBP10.4□□□□□ -0.74
AC004540.1-204ENST00000449537 DYNC2H1Q8NCM8 4307 aaKnown RBP10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 C5orf58C9J3I9 102 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 ZNF205O95201 554 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 MMP9P14780 707 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 ETS2P15036 469 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 HOXB6P17509 224 aaKnown RBP10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 GRPRP30550 384 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 EGR4Q05215 589 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 DCTN2Q13561 401 aaKnown RBP10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 VMACQ2NL98 169 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 MTX3Q5HYI7 312 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 ZBTB37Q5TC79 503 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 WDR25Q64LD2 544 aaPredicted RBP10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 LRRC74BQ6ZQY2 392 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 ZER1Q7Z7L7 766 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 CALHM3Q86XJ0 350 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 VRK2Q86Y07 508 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 NDUFA11Q86Y39 141 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 KRT73Q86Y46 540 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 SLC15A3Q8IY34 581 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 ZNF101Q8IZC7 436 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 HIPK4Q8NE63 616 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 OR2Z1Q8NG97 314 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 ITLN1Q8WWA0 313 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 RASSF5Q8WWW0 418 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 STMN2Q93045 179 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 WDFY2Q96P53 400 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 TMEM246Q9BRR3 403 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 SPATA5L1Q9BVQ7 753 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 EVA1AQ9H8M9 152 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 CNTD2Q9H8S5 307 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 BCL2L10Q9HD36 194 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 TMEM38BQ9NVV0 291 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 MAGEL2Q9UJ55 1249 aa10.39□□□□□ -0.75
AC004540.1-204ENST00000449537 IFNL4K9M1U5 179 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 NME4O00746 187 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 SURF4O15260 269 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 GSC2O15499 205 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 TIMM8AO60220 97 aaPredicted RBP10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 GMNNO75496 209 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 HPRP00739 348 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 IFNA14P01570 189 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 DBIP07108 87 aaKnown RBP10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 VSIG10L2P0DP72 767 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 NR2F1P10589 423 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 ETFAP13804 333 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 AHCYP23526 432 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 CSNK1A1P48729 337 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 CDK6Q00534 326 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 COX10Q12887 443 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 RABL3Q5HYI8 236 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 REEP3Q6NUK4 255 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 MEPCEQ7L2J0 689 aaKnown RBP10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 SLC16A14Q7RTX9 510 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 RNF144BQ7Z419 303 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 PATL1Q86TB9 770 aaKnown RBP10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 PIP4P2Q8N4L2 257 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 ANKFN1Q8N957 763 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 OR10A6Q8NH74 314 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 OR2T6Q8NHC8 308 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 VANGL1Q8TAA9 524 aaPredicted RBP10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 TAAR8Q969N4 342 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 ZNF607Q96SK3 696 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 KCTD14Q9BQ13 255 aaPredicted RBP10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 THTPAQ9BU02 230 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 CADM1Q9BY67 442 aaKnown RBP10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 SLC38A1Q9H2H9 487 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 IKZF5Q9H5V7 419 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 ARMC7Q9H6L4 198 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 ADA2Q9NZK5 511 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 IL19Q9UHD0 177 aa10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 CAB39Q9Y376 341 aaPredicted RBP10.38□□□□□ -0.75
AC004540.1-204ENST00000449537 A0A0G2JPF8 293 aa10.37□□□□□ -0.75
AC004540.1-204ENST00000449537 ELOVL7A1L3X0 281 aa10.37□□□□□ -0.75
AC004540.1-204ENST00000449537 CDHR4A6H8M9 788 aa10.37□□□□□ -0.75
AC004540.1-204ENST00000449537 PRORSD1PA6NEY8 169 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms