RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 OR2H1Q9GZK4 316 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 OR10A4Q9H209 315 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 MARCH7Q9H992 704 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 B3GNT2Q9NY97 397 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 UBAP1Q9NZ09 502 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 CYB5R1Q9UHQ9 305 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 GDF2Q9UK05 429 aaPredicted RBP14.98□□□□□ -0.01
LIME1-202ENST00000444951 TIMM10BQ9Y5J6 103 aa14.98□□□□□ -0.01
LIME1-202ENST00000444951 CELA3BP08861 270 aa14.97□□□□□ -0.01
LIME1-202ENST00000444951 MMP7P09237 267 aaPredicted RBP14.97□□□□□ -0.01
LIME1-202ENST00000444951 PSG4Q00888 419 aa14.97□□□□□ -0.01
LIME1-202ENST00000444951 SCRN3Q0VDG4 424 aa14.97□□□□□ -0.01
LIME1-202ENST00000444951 POU4F2Q12837 409 aa14.97□□□□□ -0.01
LIME1-202ENST00000444951 TMED1Q13445 227 aa14.97□□□□□ -0.01
LIME1-202ENST00000444951 MED21Q13503 144 aa14.97□□□□□ -0.01
LIME1-202ENST00000444951 CFAP77Q6ZQR2 320 aa14.97□□□□□ -0.01
LIME1-202ENST00000444951 DPPA2Q7Z7J5 298 aa14.97□□□□□ -0.01
LIME1-202ENST00000444951 GJC3Q8NFK1 279 aa14.97□□□□□ -0.01
LIME1-202ENST00000444951 NINJ1Q92982 152 aa14.97□□□□□ -0.01
LIME1-202ENST00000444951 MS4A3Q96HJ5 214 aa14.97□□□□□ -0.01
LIME1-202ENST00000444951 BOD1Q96IK1 185 aa14.97□□□□□ -0.01
LIME1-202ENST00000444951 USB1Q9BQ65 265 aaKnown RBP14.97□□□□□ -0.01
LIME1-202ENST00000444951 WNT5BQ9H1J7 359 aa14.97□□□□□ -0.01
LIME1-202ENST00000444951 OBP2BQ9NPH6 170 aa14.97□□□□□ -0.01
LIME1-202ENST00000444951 CENPMQ9NSP4 180 aa14.97□□□□□ -0.01
LIME1-202ENST00000444951 HAO2Q9NYQ3 351 aa14.97□□□□□ -0.01
LIME1-202ENST00000444951 PLEK2Q9NYT0 353 aa14.97□□□□□ -0.01
LIME1-202ENST00000444951 NPAP1Q9NZP6 1156 aa14.97□□□□□ -0.01
LIME1-202ENST00000444951 LAMP5Q9UJQ1 280 aa14.97□□□□□ -0.01
LIME1-202ENST00000444951 KLHDC2Q9Y2U9 406 aa14.97□□□□□ -0.01
LIME1-202ENST00000444951 FLNAP21333 2647 aaKnown RBP14.96□□□□□ -0.01
LIME1-202ENST00000444951 NIPBLQ6KC79 2804 aaeCLIP14.96□□□□□ -0.01
LIME1-202ENST00000444951 CASKO14936 926 aa14.96□□□□□ -0.01
LIME1-202ENST00000444951 SGCEO43556 437 aa14.96□□□□□ -0.01
LIME1-202ENST00000444951 DOK2O60496 412 aa14.96□□□□□ -0.01
LIME1-202ENST00000444951 PLP2Q04941 152 aa14.96□□□□□ -0.01
LIME1-202ENST00000444951 TEX30Q5JUR7 227 aa14.96□□□□□ -0.01
LIME1-202ENST00000444951 RFLNBQ8N5W9 214 aa14.96□□□□□ -0.01
LIME1-202ENST00000444951 FAM222BQ8WU58 562 aa14.96□□□□□ -0.01
LIME1-202ENST00000444951 MAP6Q96JE9 813 aa14.96□□□□□ -0.01
LIME1-202ENST00000444951 AMELYQ99218 206 aa14.96□□□□□ -0.01
LIME1-202ENST00000444951 ABHD6Q9BV23 337 aa14.96□□□□□ -0.01
LIME1-202ENST00000444951 YIPF3Q9GZM5 350 aa14.96□□□□□ -0.01
LIME1-202ENST00000444951 COPS3Q9UNS2 423 aa14.96□□□□□ -0.01
LIME1-202ENST00000444951 NAV3Q8IVL0 2385 aa14.96□□□□□ -0.02
LIME1-202ENST00000444951 DNHD1Q96M86 4753 aa14.95□□□□□ -0.02
LIME1-202ENST00000444951 IQCMA0A1B0GVH7 501 aa14.95□□□□□ -0.02
LIME1-202ENST00000444951 PTGES3LE9PB15 166 aa14.95□□□□□ -0.02
LIME1-202ENST00000444951 ZNF670-ZNF695F2Z2N8 137 aa14.95□□□□□ -0.02
LIME1-202ENST00000444951 PSMD9O00233 223 aa14.95□□□□□ -0.02
LIME1-202ENST00000444951 SLC1A7O00341 560 aa14.95□□□□□ -0.02
LIME1-202ENST00000444951 LYNP07948 512 aa14.95□□□□□ -0.02
LIME1-202ENST00000444951 CCL2P13500 99 aa14.95□□□□□ -0.02
LIME1-202ENST00000444951 CD99P14209 185 aa14.95□□□□□ -0.02
LIME1-202ENST00000444951 CBR1P16152 277 aa14.95□□□□□ -0.02
LIME1-202ENST00000444951 APEX1P27695 318 aaKnown RBP14.95□□□□□ -0.02
LIME1-202ENST00000444951 HTR5AP47898 357 aa14.95□□□□□ -0.02
LIME1-202ENST00000444951 TAF13Q15543 124 aa14.95□□□□□ -0.02
LIME1-202ENST00000444951 KLHL22Q53GT1 634 aa14.95□□□□□ -0.02
LIME1-202ENST00000444951 CCDC92Q53HC0 331 aaPredicted RBP14.95□□□□□ -0.02
LIME1-202ENST00000444951 AHSA2Q719I0 299 aa14.95□□□□□ -0.02
LIME1-202ENST00000444951 SYT9Q86SS6 491 aa14.95□□□□□ -0.02
LIME1-202ENST00000444951 MYPOPQ86VE0 399 aaPredicted RBP14.95□□□□□ -0.02
LIME1-202ENST00000444951 TGIF2LYQ8IUE0 185 aa14.95□□□□□ -0.02
LIME1-202ENST00000444951 ALDH16A1Q8IZ83 802 aa14.95□□□□□ -0.02
LIME1-202ENST00000444951 CPEB3Q8NE35 698 aaKnown RBP14.95□□□□□ -0.02
LIME1-202ENST00000444951 OR52I1Q8NGK6 324 aa14.95□□□□□ -0.02
LIME1-202ENST00000444951 OTOSQ8NHW6 89 aa14.95□□□□□ -0.02
LIME1-202ENST00000444951 GGHQ92820 318 aa14.95□□□□□ -0.02
LIME1-202ENST00000444951 SLAMF6Q96DU3 332 aa14.95□□□□□ -0.02
LIME1-202ENST00000444951 POM121Q96HA1 1249 aa14.95□□□□□ -0.02
LIME1-202ENST00000444951 C1orf198Q9H425 327 aa14.95□□□□□ -0.02
LIME1-202ENST00000444951 SCN3BQ9NY72 215 aa14.95□□□□□ -0.02
LIME1-202ENST00000444951 MYRFQ9Y2G1 1151 aa14.95□□□□□ -0.02
LIME1-202ENST00000444951 LRRC42Q9Y546 428 aa14.95□□□□□ -0.02
LIME1-202ENST00000444951 DAPL1A0PJW8 107 aa14.94□□□□□ -0.02
LIME1-202ENST00000444951 MAGEB4O15481 346 aaPredicted RBP14.94□□□□□ -0.02
LIME1-202ENST00000444951 FADS2O95864 444 aaKnown RBP14.94□□□□□ -0.02
LIME1-202ENST00000444951 CCNOP22674 350 aa14.94□□□□□ -0.02
LIME1-202ENST00000444951 CXCR4P61073 352 aa14.94□□□□□ -0.02
LIME1-202ENST00000444951 RAB40BQ12829 278 aa14.94□□□□□ -0.02
LIME1-202ENST00000444951 RAB35Q15286 201 aa14.94□□□□□ -0.02
LIME1-202ENST00000444951 PCK2Q16822 640 aa14.94□□□□□ -0.02
LIME1-202ENST00000444951 ELFN2Q5R3F8 820 aa14.94□□□□□ -0.02
LIME1-202ENST00000444951 VASH1Q7L8A9 365 aaPredicted RBP14.94□□□□□ -0.02
LIME1-202ENST00000444951 ZNF454Q8N9F8 522 aa14.94□□□□□ -0.02
LIME1-202ENST00000444951 ZNF540Q8NDQ6 660 aa14.94□□□□□ -0.02
LIME1-202ENST00000444951 SLC7A6Q92536 515 aa14.94□□□□□ -0.02
LIME1-202ENST00000444951 DACH2Q96NX9 599 aa14.94□□□□□ -0.02
LIME1-202ENST00000444951 EXOGQ9Y2C4 368 aaKnown RBP14.94□□□□□ -0.02
LIME1-202ENST00000444951 IGHV1-18A0A0C4DH31 117 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 A0A1W2PQL4 384 aaPredicted RBP14.93□□□□□ -0.02
LIME1-202ENST00000444951 EFCAB10A6NFE3 127 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 OR2T7P0C7T2 308 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 CECR9P0C854 216 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 APLNRP35414 380 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 PEX19P40855 299 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 HIST1H3AP68431 136 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 GALK2Q01415 458 aa14.93□□□□□ -0.02
LIME1-202ENST00000444951 DAZAP2Q15038 168 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms