RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 SLCO1C1Q9NYB5 712 aa20.24■□□□□ 0.83
VARS-217ENST00000440048 PDP1Q9P0J1 537 aaPredicted RBP20.24■□□□□ 0.83
VARS-217ENST00000440048 BAIAP2Q9UQB8 552 aa20.24■□□□□ 0.83
VARS-217ENST00000440048 OR6C6A6NF89 314 aa20.23■□□□□ 0.83
VARS-217ENST00000440048 E2F6O75461 281 aa20.23■□□□□ 0.83
VARS-217ENST00000440048 PPP1CBP62140 327 aa20.23■□□□□ 0.83
VARS-217ENST00000440048 HIST1H3AP68431 136 aa20.23■□□□□ 0.83
VARS-217ENST00000440048 LOXL1Q08397 574 aaPredicted RBP20.23■□□□□ 0.83
VARS-217ENST00000440048 HIST2H3PS2Q5TEC6 136 aa20.23■□□□□ 0.83
VARS-217ENST00000440048 ARL9Q6T311 187 aa20.23■□□□□ 0.83
VARS-217ENST00000440048 HIST2H3AQ71DI3 136 aa20.23■□□□□ 0.83
VARS-217ENST00000440048 C1orf174Q8IYL3 243 aa20.23■□□□□ 0.83
VARS-217ENST00000440048 SLC37A3Q8NCC5 494 aa20.23■□□□□ 0.83
VARS-217ENST00000440048 OR2T33Q8NG76 320 aa20.23■□□□□ 0.83
VARS-217ENST00000440048 OR1F12Q8NHA8 337 aa20.23■□□□□ 0.83
VARS-217ENST00000440048 UBASH3BQ8TF42 649 aa20.23■□□□□ 0.83
VARS-217ENST00000440048 SLC7A6Q92536 515 aa20.23■□□□□ 0.83
VARS-217ENST00000440048 PIMREGQ9BSJ6 248 aa20.23■□□□□ 0.83
VARS-217ENST00000440048 OR2J1Q9GZK6 312 aa20.23■□□□□ 0.83
VARS-217ENST00000440048 DNAJB9Q9UBS3 223 aa20.23■□□□□ 0.83
VARS-217ENST00000440048 GPR160Q9UJ42 338 aa20.23■□□□□ 0.83
VARS-217ENST00000440048 ABHD16AO95870 558 aa20.22■□□□□ 0.83
VARS-217ENST00000440048 IGHV3-13P01766 116 aa20.22■□□□□ 0.83
VARS-217ENST00000440048 PYCR1P32322 319 aa20.22■□□□□ 0.83
VARS-217ENST00000440048 MPV17P39210 176 aa20.22■□□□□ 0.83
VARS-217ENST00000440048 NR4A2P43354 598 aa20.22■□□□□ 0.83
VARS-217ENST00000440048 ARHGDIAP52565 204 aa20.22■□□□□ 0.83
VARS-217ENST00000440048 SLC36A3Q495N2 470 aa20.22■□□□□ 0.83
VARS-217ENST00000440048 CORO6Q6QEF8 472 aa20.22■□□□□ 0.83
VARS-217ENST00000440048 HS3ST5Q8IZT8 346 aa20.22■□□□□ 0.83
VARS-217ENST00000440048 ZNF786Q8N393 782 aa20.22■□□□□ 0.83
VARS-217ENST00000440048 GJC3Q8NFK1 279 aa20.22■□□□□ 0.83
VARS-217ENST00000440048 KLF14Q8TD94 323 aaPredicted RBP20.22■□□□□ 0.83
VARS-217ENST00000440048 HINT3Q9NQE9 182 aaKnown RBP20.22■□□□□ 0.83
VARS-217ENST00000440048 HLA-DQA2P01906 255 aa20.21■□□□□ 0.83
VARS-217ENST00000440048 USF1P22415 310 aaPredicted RBP20.21■□□□□ 0.83
VARS-217ENST00000440048 GCH1P30793 250 aa20.21■□□□□ 0.83
VARS-217ENST00000440048 MOGQ16653 247 aa20.21■□□□□ 0.83
VARS-217ENST00000440048 TMEM255AQ5JRV8 349 aa20.21■□□□□ 0.83
VARS-217ENST00000440048 MBNL2Q5VZF2 373 aaKnown RBP20.21■□□□□ 0.83
VARS-217ENST00000440048 OR2T4Q8NH00 348 aa20.21■□□□□ 0.83
VARS-217ENST00000440048 SNX33Q8WV41 574 aa20.21■□□□□ 0.83
VARS-217ENST00000440048 ZNRF4Q8WWF5 429 aa20.21■□□□□ 0.83
VARS-217ENST00000440048 IPCEF1Q8WWN9 437 aaPredicted RBP20.21■□□□□ 0.83
VARS-217ENST00000440048 MMADHCQ9H3L0 296 aaPredicted RBP20.21■□□□□ 0.83
VARS-217ENST00000440048 TBCCD1Q9NVR7 557 aa20.21■□□□□ 0.83
VARS-217ENST00000440048 MRPL22Q9NWU5 206 aaKnown RBP20.21■□□□□ 0.83
VARS-217ENST00000440048 ATPIF1Q9UII2 106 aa20.21■□□□□ 0.83
VARS-217ENST00000440048 KLHL21Q9UJP4 597 aa20.21■□□□□ 0.83
VARS-217ENST00000440048 GRIP1Q9Y3R0 1128 aa20.21■□□□□ 0.83
VARS-217ENST00000440048 C17orf100A8MU93 164 aa20.2■□□□□ 0.82
VARS-217ENST00000440048 LYNX1G3V0Z9 82 aa20.2■□□□□ 0.82
VARS-217ENST00000440048 HPXP02790 462 aa20.2■□□□□ 0.82
VARS-217ENST00000440048 LYNX1P0DP58 116 aa20.2■□□□□ 0.82
VARS-217ENST00000440048 GGT2P36268 569 aa20.2■□□□□ 0.82
VARS-217ENST00000440048 PPP2R2BQ00005 443 aa20.2■□□□□ 0.82
VARS-217ENST00000440048 CRMP1Q14194 572 aa20.2■□□□□ 0.82
VARS-217ENST00000440048 ELFN2Q5R3F8 820 aa20.2■□□□□ 0.82
VARS-217ENST00000440048 SLC18B1Q6NT16 456 aa20.2■□□□□ 0.82
VARS-217ENST00000440048 LINC00346Q8IVM7 164 aa20.2■□□□□ 0.82
VARS-217ENST00000440048 PROKR2Q8NFJ6 384 aa20.2■□□□□ 0.82
VARS-217ENST00000440048 OR9Q1Q8NGQ5 310 aa20.2■□□□□ 0.82
VARS-217ENST00000440048 TEX47Q8TBZ9 253 aa20.2■□□□□ 0.82
VARS-217ENST00000440048 GTF3AQ92664 365 aaKnown RBP20.2■□□□□ 0.82
VARS-217ENST00000440048 RBM4Q9BWF3 364 aaKnown RBP20.2■□□□□ 0.82
VARS-217ENST00000440048 NTN4Q9HB63 628 aa20.2■□□□□ 0.82
VARS-217ENST00000440048 H3BN98 237 aa20.19■□□□□ 0.82
VARS-217ENST00000440048 H3BSA7 217 aa20.19■□□□□ 0.82
VARS-217ENST00000440048 TIPRLO75663 272 aa20.19■□□□□ 0.82
VARS-217ENST00000440048 DBHP09172 617 aa20.19■□□□□ 0.82
VARS-217ENST00000440048 PRKACGP22612 351 aa20.19■□□□□ 0.82
VARS-217ENST00000440048 GIFP27352 417 aa20.19■□□□□ 0.82
VARS-217ENST00000440048 GGTLC2Q14390 218 aa20.19■□□□□ 0.82
VARS-217ENST00000440048 TMEM249Q2WGJ8 235 aa20.19■□□□□ 0.82
VARS-217ENST00000440048 TMEM154Q6P9G4 183 aa20.19■□□□□ 0.82
VARS-217ENST00000440048 CFAP77Q6ZQR2 320 aa20.19■□□□□ 0.82
VARS-217ENST00000440048 IQCF1Q8N6M8 205 aa20.19■□□□□ 0.82
VARS-217ENST00000440048 ZNF540Q8NDQ6 660 aa20.19■□□□□ 0.82
VARS-217ENST00000440048 OR51L1Q8NGJ5 315 aa20.19■□□□□ 0.82
VARS-217ENST00000440048 COQ7Q99807 217 aa20.19■□□□□ 0.82
VARS-217ENST00000440048 CDADC1Q9BWV3 514 aa20.19■□□□□ 0.82
VARS-217ENST00000440048 BPESC1Q9GZL8 116 aa20.19■□□□□ 0.82
VARS-217ENST00000440048 HDHD2Q9H0R4 259 aa20.19■□□□□ 0.82
VARS-217ENST00000440048 POFUT1Q9H488 388 aa20.19■□□□□ 0.82
VARS-217ENST00000440048 CYB5R1Q9UHQ9 305 aa20.19■□□□□ 0.82
VARS-217ENST00000440048 CD5LO43866 347 aa20.18■□□□□ 0.82
VARS-217ENST00000440048 NCR1O76036 304 aa20.18■□□□□ 0.82
VARS-217ENST00000440048 IFNGP01579 166 aa20.18■□□□□ 0.82
VARS-217ENST00000440048 MAGEB1P43366 347 aa20.18■□□□□ 0.82
VARS-217ENST00000440048 SLC25A1P53007 311 aa20.18■□□□□ 0.82
VARS-217ENST00000440048 C1orf146Q5VVC0 180 aa20.18■□□□□ 0.82
VARS-217ENST00000440048 OR2AJ1Q8NGZ0 328 aa20.18■□□□□ 0.82
VARS-217ENST00000440048 UTP4Q969X6 686 aaKnown RBP20.18■□□□□ 0.82
VARS-217ENST00000440048 DCLRE1CQ96SD1 692 aaKnown RBP20.18■□□□□ 0.82
VARS-217ENST00000440048 NMNAT2Q9BZQ4 307 aa20.18■□□□□ 0.82
VARS-217ENST00000440048 ZNF556Q9HAH1 456 aa20.18■□□□□ 0.82
VARS-217ENST00000440048 CMC2Q9NRP2 79 aa20.18■□□□□ 0.82
VARS-217ENST00000440048 STARD10Q9Y365 291 aa20.18■□□□□ 0.82
VARS-217ENST00000440048 IGHV4-61A0A0C4DH41 118 aa20.17■□□□□ 0.82
VARS-217ENST00000440048 TVP23AA6NH52 213 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms