RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 TTLL8A6PVC2 850 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 M0R036 132 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 SLC34A2O95436 690 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 GPANK1O95872 356 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 POU4F3Q15319 338 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 TOMM34Q15785 309 aaPredicted RBP11.11□□□□□ -0.63
TCOF1-205ENST00000439160 ZNF767PQ75MW2 155 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 D2HGDHQ8N465 521 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 OR5H6Q8NGV6 325 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 OR10K1Q8NGX5 313 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 OR52I2Q8NH67 350 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 FNDC9Q8TBE3 224 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 ZPBPQ9BS86 351 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 LANCL2Q9NS86 450 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 NUP50Q9UKX7 468 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 TMEM265A0A087WTH1 108 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 SMLR1H3BR10 107 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 CRYZL1O95825 349 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 B4GALT1P15291 398 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 SIGLEC14Q08ET2 396 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 ZNF141Q15928 474 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.11□□□□□ -0.63
TCOF1-205ENST00000439160 DEFB109BQ30KR1 87 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 C1QL3Q5VWW1 255 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 ELP2Q6IA86 826 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 SEC22AQ96IW7 307 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 DUSP15Q9H1R2 295 aaPredicted RBP11.11□□□□□ -0.63
TCOF1-205ENST00000439160 GPR173Q9NS66 373 aa11.11□□□□□ -0.63
TCOF1-205ENST00000439160 IFITM5A6NNB3 132 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 TK1P04183 234 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 EGR3Q06889 387 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 STOML3Q8TAV4 291 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 TXNDC15Q96J42 360 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 C10orf90Q96M02 699 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 CES1P1Q9UKY3 287 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 RAB22AQ9UL26 194 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 TEX51A0A1B0GUA7 166 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 DHHO43323 396 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 TIMM8AO60220 97 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-205ENST00000439160 CDK2P24941 298 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 FCN2Q15485 313 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 BEX5Q5H9J7 111 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 DOK3Q7L591 496 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 SEMA6DQ8NFY4 1073 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 FLRT3Q9NZU0 649 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 SCN2AQ99250 2005 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 CENPVL1A0A0U1RR11 272 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 ARPC3O15145 178 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 CALCBP10092 127 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 ADH6P28332 368 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 GABRA2P47869 451 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 ATF6BQ99941 703 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 MFRPQ9BY79 579 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 ZNF286AQ9HBT8 521 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 DTX4Q9Y2E6 619 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 SMCO3A2RU48 225 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 MCRIP1C9JLW8 97 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 D6RAR5 112 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 EVX1P49640 407 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 CCR9P51686 369 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 SLC25A35Q3KQZ1 300 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 DEFB124Q8NES8 71 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 GDF2Q9UK05 429 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-205ENST00000439160 LHX6Q9UPM6 363 aa11.1□□□□□ -0.63
TCOF1-205ENST00000439160 AIPO00170 330 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 IFNA5P01569 189 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 WNT1P04628 370 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 ERGP11308 486 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 CD53P19397 219 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 IL2RGP31785 369 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 CDKN2AP42771 156 aaKnown RBP11.09□□□□□ -0.63
TCOF1-205ENST00000439160 MECP2P51608 486 aaKnown RBP11.09□□□□□ -0.63
TCOF1-205ENST00000439160 RRAS2P62070 204 aaPredicted RBP11.09□□□□□ -0.63
TCOF1-205ENST00000439160 LTC4SQ16873 150 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 WDR74Q6RFH5 385 aaPredicted RBP11.09□□□□□ -0.63
TCOF1-205ENST00000439160 CD300LDQ6UXZ3 194 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 STAC2Q6ZMT1 411 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 OR1M1Q8NGA1 313 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 C11orf40Q8WZ69 217 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 ERVMER34-1Q9H9K5 563 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 CRLF2Q9HC73 371 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 AKIP1Q9NQ31 210 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 CCDC163A0A0D9SF12 145 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 TMEM235A6NFC5 223 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 IDH3GP51553 393 aaPredicted RBP11.09□□□□□ -0.63
TCOF1-205ENST00000439160 MVDP53602 400 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 TAS2R46P59540 309 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 ACER2Q5QJU3 275 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 PDZD9Q8IXQ8 264 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 PELI1Q96FA3 418 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 CACNA1HO95180 2353 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 M0R296 226 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 EIF4EP06730 217 aaKnown RBP11.09□□□□□ -0.63
TCOF1-205ENST00000439160 DSCR4P56555 118 aaPredicted RBP11.09□□□□□ -0.63
TCOF1-205ENST00000439160 SLC37A1P57057 533 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 RBPJQ06330 500 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 CLN3Q13286 438 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 SSX1Q16384 188 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 DTWD2Q8NBA8 298 aa11.09□□□□□ -0.63
TCOF1-205ENST00000439160 OR51S1Q8NGJ8 323 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms