RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 MAGEB1P43366 347 aa11.25□□□□□ -0.61
SSB-203ENST00000413002 EVX1P49640 407 aa11.25□□□□□ -0.61
SSB-203ENST00000413002 PDLIM4P50479 330 aa11.25□□□□□ -0.61
SSB-203ENST00000413002 KLF3P57682 345 aaPredicted RBP11.25□□□□□ -0.61
SSB-203ENST00000413002 PPP1CBP62140 327 aa11.25□□□□□ -0.61
SSB-203ENST00000413002 KRTAP1-1Q07627 177 aa11.25□□□□□ -0.61
SSB-203ENST00000413002 CCNIQ14094 377 aa11.25□□□□□ -0.61
SSB-203ENST00000413002 OR2T33Q8NG76 320 aa11.25□□□□□ -0.61
SSB-203ENST00000413002 OR1F12Q8NHA8 337 aa11.25□□□□□ -0.61
SSB-203ENST00000413002 TEX47Q8TBZ9 253 aa11.25□□□□□ -0.61
SSB-203ENST00000413002 IPCEF1Q8WWN9 437 aaPredicted RBP11.25□□□□□ -0.61
SSB-203ENST00000413002 OTULINQ96BN8 352 aa11.25□□□□□ -0.61
SSB-203ENST00000413002 MARS2Q96GW9 593 aaKnown RBP11.25□□□□□ -0.61
SSB-203ENST00000413002 SNX18Q96RF0 628 aa11.25□□□□□ -0.61
SSB-203ENST00000413002 HCAR1Q9BXC0 346 aa11.25□□□□□ -0.61
SSB-203ENST00000413002 RACGAP1Q9H0H5 632 aa11.25□□□□□ -0.61
SSB-203ENST00000413002 YY1AP1Q9H869 796 aa11.25□□□□□ -0.61
SSB-203ENST00000413002 NDRG4Q9ULP0 352 aaKnown RBP11.25□□□□□ -0.61
SSB-203ENST00000413002 IGLV3-9A0A075B6K5 115 aa11.24□□□□□ -0.61
SSB-203ENST00000413002 OR6C6A6NF89 314 aa11.24□□□□□ -0.61
SSB-203ENST00000413002 FAM183AA6NL82 134 aa11.24□□□□□ -0.61
SSB-203ENST00000413002 NCR1O76036 304 aa11.24□□□□□ -0.61
SSB-203ENST00000413002 ABHD16AO95870 558 aa11.24□□□□□ -0.61
SSB-203ENST00000413002 HEXAP06865 529 aa11.24□□□□□ -0.61
SSB-203ENST00000413002 PSKH1P11801 424 aa11.24□□□□□ -0.61
SSB-203ENST00000413002 GCH1P30793 250 aa11.24□□□□□ -0.61
SSB-203ENST00000413002 DSCR9P59020 149 aa11.24□□□□□ -0.61
SSB-203ENST00000413002 SELENOVP59797 346 aa11.24□□□□□ -0.61
SSB-203ENST00000413002 GGTLC2Q14390 218 aa11.24□□□□□ -0.61
SSB-203ENST00000413002 GINS1Q14691 196 aa11.24□□□□□ -0.61
SSB-203ENST00000413002 ACSM5Q6NUN0 579 aa11.24□□□□□ -0.61
SSB-203ENST00000413002 CD300LDQ6UXZ3 194 aa11.24□□□□□ -0.61
SSB-203ENST00000413002 CFAP77Q6ZQR2 320 aa11.24□□□□□ -0.61
SSB-203ENST00000413002 AMIGO2Q86SJ2 522 aa11.24□□□□□ -0.61
SSB-203ENST00000413002 ATG16L2Q8NAA4 619 aa11.24□□□□□ -0.61
SSB-203ENST00000413002 ZNF511Q8NB15 262 aa11.24□□□□□ -0.61
SSB-203ENST00000413002 KLF14Q8TD94 323 aaPredicted RBP11.24□□□□□ -0.61
SSB-203ENST00000413002 UTP4Q969X6 686 aaKnown RBP11.24□□□□□ -0.61
SSB-203ENST00000413002 RBM4Q9BWF3 364 aaKnown RBP11.24□□□□□ -0.61
SSB-203ENST00000413002 CDADC1Q9BWV3 514 aa11.24□□□□□ -0.61
SSB-203ENST00000413002 MS4A5Q9H3V2 200 aa11.24□□□□□ -0.61
SSB-203ENST00000413002 WDR76Q9H967 626 aa11.24□□□□□ -0.61
SSB-203ENST00000413002 STARD10Q9Y365 291 aa11.24□□□□□ -0.61
SSB-203ENST00000413002 ZFHX3Q15911 3703 aa11.23□□□□□ -0.61
SSB-203ENST00000413002 ARRDC5A6NEK1 342 aa11.23□□□□□ -0.61
SSB-203ENST00000413002 ERCC1P07992 297 aaPredicted RBP11.23□□□□□ -0.61
SSB-203ENST00000413002 COX5BP10606 129 aa11.23□□□□□ -0.61
SSB-203ENST00000413002 COL8A2P25067 703 aa11.23□□□□□ -0.61
SSB-203ENST00000413002 GGT2P36268 569 aa11.23□□□□□ -0.61
SSB-203ENST00000413002 HIST1H3AP68431 136 aa11.23□□□□□ -0.61
SSB-203ENST00000413002 CCL8P80075 99 aa11.23□□□□□ -0.61
SSB-203ENST00000413002 COX10Q12887 443 aa11.23□□□□□ -0.61
SSB-203ENST00000413002 HNRNPA0Q13151 305 aaKnown RBP11.23□□□□□ -0.61
SSB-203ENST00000413002 TSTQ16762 297 aaKnown RBP11.23□□□□□ -0.61
SSB-203ENST00000413002 RSPO1Q2MKA7 263 aaPredicted RBP11.23□□□□□ -0.61
SSB-203ENST00000413002 ZNF718Q3SXZ3 478 aa11.23□□□□□ -0.61
SSB-203ENST00000413002 ELFN2Q5R3F8 820 aa11.23□□□□□ -0.61
SSB-203ENST00000413002 HIST2H3PS2Q5TEC6 136 aa11.23□□□□□ -0.61
SSB-203ENST00000413002 TMEM236Q5W0B7 351 aa11.23□□□□□ -0.61
SSB-203ENST00000413002 SLC18B1Q6NT16 456 aa11.23□□□□□ -0.61
SSB-203ENST00000413002 CCDC121Q6ZUS5 278 aa11.23□□□□□ -0.61
SSB-203ENST00000413002 HIST2H3AQ71DI3 136 aa11.23□□□□□ -0.61
SSB-203ENST00000413002 ASRGL1Q7L266 308 aa11.23□□□□□ -0.61
SSB-203ENST00000413002 GJC3Q8NFK1 279 aa11.23□□□□□ -0.61
SSB-203ENST00000413002 OR2AJ1Q8NGZ0 328 aa11.23□□□□□ -0.61
SSB-203ENST00000413002 OR2T4Q8NH00 348 aa11.23□□□□□ -0.61
SSB-203ENST00000413002 UBASH3BQ8TF42 649 aa11.23□□□□□ -0.61
SSB-203ENST00000413002 NEU4Q8WWR8 484 aaPredicted RBP11.23□□□□□ -0.61
SSB-203ENST00000413002 PITX2Q99697 317 aa11.23□□□□□ -0.61
SSB-203ENST00000413002 WACQ9BTA9 647 aa11.23□□□□□ -0.61
SSB-203ENST00000413002 BPESC1Q9GZL8 116 aa11.23□□□□□ -0.61
SSB-203ENST00000413002 ZNF556Q9HAH1 456 aa11.23□□□□□ -0.61
SSB-203ENST00000413002 HINT3Q9NQE9 182 aaKnown RBP11.23□□□□□ -0.61
SSB-203ENST00000413002 KLHL21Q9UJP4 597 aa11.23□□□□□ -0.61
SSB-203ENST00000413002 BAIAP2Q9UQB8 552 aa11.23□□□□□ -0.61
SSB-203ENST00000413002 IGHV4-61A0A0C4DH41 118 aa11.22□□□□□ -0.61
SSB-203ENST00000413002 LOC390937A0A1W2PQ73 354 aa11.22□□□□□ -0.61
SSB-203ENST00000413002 RIIAD1A6NNX1 92 aa11.22□□□□□ -0.61
SSB-203ENST00000413002 C17orf100A8MU93 164 aa11.22□□□□□ -0.61
SSB-203ENST00000413002 VWC2LB2RUY7 222 aa11.22□□□□□ -0.61
SSB-203ENST00000413002 SPRY3O43610 288 aa11.22□□□□□ -0.61
SSB-203ENST00000413002 CDC14BO60729 498 aa11.22□□□□□ -0.61
SSB-203ENST00000413002 MITFO75030 526 aaPredicted RBP11.22□□□□□ -0.61
SSB-203ENST00000413002 DEAF1O75398 565 aaPredicted RBP11.22□□□□□ -0.61
SSB-203ENST00000413002 CIB2O75838 187 aa11.22□□□□□ -0.61
SSB-203ENST00000413002 IGHV3-13P01766 116 aa11.22□□□□□ -0.61
SSB-203ENST00000413002 CSF3P09919 207 aa11.22□□□□□ -0.61
SSB-203ENST00000413002 OSMP13725 252 aa11.22□□□□□ -0.61
SSB-203ENST00000413002 SLC25A16P16260 332 aa11.22□□□□□ -0.61
SSB-203ENST00000413002 ZNF823P16415 610 aa11.22□□□□□ -0.61
SSB-203ENST00000413002 SPI1P17947 270 aa11.22□□□□□ -0.61
SSB-203ENST00000413002 GRK5P34947 590 aa11.22□□□□□ -0.61
SSB-203ENST00000413002 RBMXP38159 391 aaKnown RBP11.22□□□□□ -0.61
SSB-203ENST00000413002 NR4A2P43354 598 aa11.22□□□□□ -0.61
SSB-203ENST00000413002 DAPP51397 102 aa11.22□□□□□ -0.61
SSB-203ENST00000413002 ARHGDIAP52565 204 aa11.22□□□□□ -0.61
SSB-203ENST00000413002 PRSS12P56730 875 aa11.22□□□□□ -0.61
SSB-203ENST00000413002 GK3PQ14409 553 aa11.22□□□□□ -0.61
SSB-203ENST00000413002 HLXQ14774 488 aaPredicted RBP11.22□□□□□ -0.61
SSB-203ENST00000413002 C2CD3Q4AC94 2353 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms