RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 LOXL2Q9Y4K0 774 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 PCDHGA1Q9Y5H4 931 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 N6AMT1Q9Y5N5 214 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 TRAV8-7A0A075B6U6 113 aa12.09□□□□□ -0.47
LIMS1-205ENST00000410093 A0A0B4J293 547 aa12.09□□□□□ -0.47
LIMS1-205ENST00000410093 ZNF878C9JN71 531 aa12.09□□□□□ -0.47
LIMS1-205ENST00000410093 LINC01387J3KSC0 135 aa12.09□□□□□ -0.47
LIMS1-205ENST00000410093 SCGNO76038 276 aa12.09□□□□□ -0.47
LIMS1-205ENST00000410093 GLSO94925 669 aaPredicted RBP12.09□□□□□ -0.47
LIMS1-205ENST00000410093 PNPP00491 289 aa12.09□□□□□ -0.47
LIMS1-205ENST00000410093 MAS1P04201 325 aa12.09□□□□□ -0.47
LIMS1-205ENST00000410093 GDNFP39905 211 aa12.09□□□□□ -0.47
LIMS1-205ENST00000410093 RPS27P42677 84 aaKnown RBP12.09□□□□□ -0.47
LIMS1-205ENST00000410093 DNASE1L1P49184 302 aa12.09□□□□□ -0.47
LIMS1-205ENST00000410093 LSM6P62312 80 aaKnown RBP12.09□□□□□ -0.47
LIMS1-205ENST00000410093 RPS15P62841 145 aaKnown RBP12.09□□□□□ -0.47
LIMS1-205ENST00000410093 RAC1P63000 192 aa12.09□□□□□ -0.47
LIMS1-205ENST00000410093 MAB21L1Q13394 359 aa12.09□□□□□ -0.47
LIMS1-205ENST00000410093 TMEM176BQ3YBM2 270 aaPredicted RBP12.09□□□□□ -0.47
LIMS1-205ENST00000410093 TMEM164Q5U3C3 297 aa12.09□□□□□ -0.47
LIMS1-205ENST00000410093 OLFML2AQ68BL7 652 aa12.09□□□□□ -0.47
LIMS1-205ENST00000410093 FAM166AQ6J272 317 aa12.09□□□□□ -0.47
LIMS1-205ENST00000410093 CCDC54Q8NEL0 328 aa12.09□□□□□ -0.47
LIMS1-205ENST00000410093 ZCCHC14Q8WYQ9 949 aaKnown RBP12.09□□□□□ -0.47
LIMS1-205ENST00000410093 C11orf40Q8WZ69 217 aa12.09□□□□□ -0.47
LIMS1-205ENST00000410093 RNF31Q96EP0 1072 aa12.09□□□□□ -0.47
LIMS1-205ENST00000410093 DNAJA3Q96EY1 480 aa12.09□□□□□ -0.47
LIMS1-205ENST00000410093 SCMH1Q96GD3 660 aa12.09□□□□□ -0.47
LIMS1-205ENST00000410093 SF3B5Q9BWJ5 86 aaKnown RBP12.09□□□□□ -0.47
LIMS1-205ENST00000410093 GPR87Q9BY21 358 aa12.09□□□□□ -0.47
LIMS1-205ENST00000410093 B3GNT4Q9C0J1 378 aa12.09□□□□□ -0.47
LIMS1-205ENST00000410093 ZNF160Q9HCG1 818 aa12.09□□□□□ -0.47
LIMS1-205ENST00000410093 G6PC2Q9NQR9 355 aa12.09□□□□□ -0.47
LIMS1-205ENST00000410093 NUFIP1Q9UHK0 495 aaKnown RBP12.09□□□□□ -0.47
LIMS1-205ENST00000410093 DKKL1Q9UK85 242 aa12.09□□□□□ -0.47
LIMS1-205ENST00000410093 A0A0B4J203 849 aa12.08□□□□□ -0.48
LIMS1-205ENST00000410093 LOC390937A0A1W2PQ73 354 aa12.08□□□□□ -0.48
LIMS1-205ENST00000410093 RGS13O14921 159 aa12.08□□□□□ -0.48
LIMS1-205ENST00000410093 SNAPC5O75971 98 aa12.08□□□□□ -0.48
LIMS1-205ENST00000410093 P04436 131 aa12.08□□□□□ -0.48
LIMS1-205ENST00000410093 SERPINA7P05543 415 aa12.08□□□□□ -0.48
LIMS1-205ENST00000410093 ERCC1P07992 297 aaPredicted RBP12.08□□□□□ -0.48
LIMS1-205ENST00000410093 CD3GP09693 182 aa12.08□□□□□ -0.48
LIMS1-205ENST00000410093 SRD5A2P31213 254 aa12.08□□□□□ -0.48
LIMS1-205ENST00000410093 BTCP35070 178 aa12.08□□□□□ -0.48
LIMS1-205ENST00000410093 PTH2RP49190 550 aa12.08□□□□□ -0.48
LIMS1-205ENST00000410093 MADCAM1Q13477 382 aa12.08□□□□□ -0.48
LIMS1-205ENST00000410093 CD276Q5ZPR3 534 aa12.08□□□□□ -0.48
LIMS1-205ENST00000410093 DHRS13Q6UX07 377 aa12.08□□□□□ -0.48
LIMS1-205ENST00000410093 RAB11FIP2Q7L804 512 aa12.08□□□□□ -0.48
LIMS1-205ENST00000410093 TMPRSS7Q7RTY8 843 aa12.08□□□□□ -0.48
LIMS1-205ENST00000410093 NOXA1Q86UR1 476 aa12.08□□□□□ -0.48
LIMS1-205ENST00000410093 ELMOD2Q8IZ81 293 aa12.08□□□□□ -0.48
LIMS1-205ENST00000410093 OR13C3Q8NGS6 347 aa12.08□□□□□ -0.48
LIMS1-205ENST00000410093 SLAMF6Q96DU3 332 aa12.08□□□□□ -0.48
LIMS1-205ENST00000410093 SLCO5A1Q9H2Y9 848 aa12.08□□□□□ -0.48
LIMS1-205ENST00000410093 ZNF107Q9UII5 783 aaPredicted RBP12.08□□□□□ -0.48
LIMS1-205ENST00000410093 ING1Q9UK53 422 aaPredicted RBP12.08□□□□□ -0.48
LIMS1-205ENST00000410093 CLEC4AQ9UMR7 237 aa12.08□□□□□ -0.48
LIMS1-205ENST00000410093 GTF2A1LQ9UNN4 478 aa12.08□□□□□ -0.48
LIMS1-205ENST00000410093 FARSAQ9Y285 508 aaKnown RBP12.08□□□□□ -0.48
LIMS1-205ENST00000410093 EMC9Q9Y3B6 208 aa12.08□□□□□ -0.48
LIMS1-205ENST00000410093 KIF26BQ2KJY2 2108 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 A0A1B0GTH9 108 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 ANKRD20A5PA0PJZ0 165 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 C21orf140B9A014 251 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 AGRPO00253 132 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 APOC1P02654 83 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 C1QBP02746 253 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 CSF1P09603 554 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 H2AFB2P0C5Z0 115 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 RAB6AP20340 208 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 CDK2P24941 298 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 AGFG1P52594 562 aaKnown RBP12.07□□□□□ -0.48
LIMS1-205ENST00000410093 TAS2R20P59543 309 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 PSMA6P60900 246 aaKnown RBP12.07□□□□□ -0.48
LIMS1-205ENST00000410093 GRB2P62993 217 aaKnown RBP12.07□□□□□ -0.48
LIMS1-205ENST00000410093 MRPS15P82914 257 aaKnown RBP12.07□□□□□ -0.48
LIMS1-205ENST00000410093 FMODQ06828 376 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 FAM189A2Q15884 450 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 C10orf128Q5T292 105 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 PRAMEF20Q5VT98 475 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 LRFN4Q6PJG9 635 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 NCCRP1Q6ZVX7 275 aaPredicted RBP12.07□□□□□ -0.48
LIMS1-205ENST00000410093 PPP1R32Q7Z5V6 425 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 FGD2Q7Z6J4 655 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 SERPINA12Q8IW75 414 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 ESX1Q8N693 406 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 KDF1Q8NAX2 398 aaPredicted RBP12.07□□□□□ -0.48
LIMS1-205ENST00000410093 OR51A4Q8NGJ6 313 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 FAM3DQ96BQ1 224 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 MED30Q96HR3 178 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 MED28Q9H204 178 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 SCPEP1Q9HB40 452 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 FAM206AQ9NX38 181 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 SLC22A13Q9Y226 551 aa12.07□□□□□ -0.48
LIMS1-205ENST00000410093 A0A1B0GVC2 190 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 LOC107986453A0A1B0GWG9 222 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 GGT3PA6NGU5 568 aa12.06□□□□□ -0.48
LIMS1-205ENST00000410093 A6NIN4 97 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms