RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 SGCEO43556 437 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 TLX2O43763 284 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 DOK2O60496 412 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 TXNDC12O95881 172 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 ZNF250P15622 560 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 HIST1H1CP16403 213 aaKnown RBP4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 ZNF23P17027 643 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 CALB2P22676 271 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 IGFBP5P24593 272 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 FPR3P25089 353 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 GIFP27352 417 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 SLC6A6P31641 620 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 RAD52P43351 418 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 HTR5AP47898 357 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 RPS6KA3P51812 740 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 MNAT1P51948 309 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 SMIM11AP58511 58 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 SELENOVP59797 346 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 PCBD1P61457 104 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 PPP1CBP62140 327 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 CCL8P80075 99 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 RIN1Q13671 783 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 TSTQ16762 297 aaKnown RBP4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 RFX4Q33E94 735 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 SPRNQ5BIV9 151 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 CLEC12AQ5QGZ9 265 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 SLC35F1Q5T1Q4 408 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 GPR139Q6DWJ6 353 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 LCN8Q6JVE9 175 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 C1orf94Q6P1W5 598 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 PGBD2Q6P3X8 592 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 LEG1Q6P5S2 330 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 TMEM154Q6P9G4 183 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 CORO6Q6QEF8 472 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 DPY19L2P2Q6ZN68 376 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 IL17RELQ6ZVW7 336 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 JAZF1Q86VZ6 243 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 DHFR2Q86XF0 187 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 KRTAP19-1Q8IUB9 90 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 GLB1L2Q8IW92 636 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 SDR9C7Q8NEX9 313 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 OR4C15Q8NGM1 316 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 KLF14Q8TD94 323 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 SNX33Q8WV41 574 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 MSI2Q96DH6 328 aaKnown RBP4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 MARS2Q96GW9 593 aaKnown RBP4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 C4orf45Q96LM5 186 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 NMNAT3Q96T66 252 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 BTBD10Q9BSF8 475 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 PLA2G12AQ9BZM1 189 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 BCL2L14Q9BZR8 327 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 MYOZ1Q9NP98 299 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 KRCC1Q9NPI7 259 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 HINT3Q9NQE9 182 aaKnown RBP4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 RPRD1BQ9NQG5 326 aaKnown RBP4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 ZNF275Q9NSD4 429 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 FAM53CQ9NYF3 392 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 TAS2R1Q9NYW7 299 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 VSX1Q9NZR4 365 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 ASH2LQ9UBL3 628 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 EIF3KQ9UBQ5 218 aaKnown RBP4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 FBXO9Q9UK97 447 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 CACNG2Q9Y698 323 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 U3KQV3 271 aa4.92□□□□□ -1.62
HMGB1P20-201ENST00000402555 SVEP1Q4LDE5 3571 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 IGLV1-36A0A0B4J1U3 117 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 OR6C68A6NDL8 312 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 ZSCAN5BA6NJL1 495 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 C17orf100A8MU93 164 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 RER1O15258 196 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 TPD52L2O43399 206 aaKnown RBP4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 PPIHO43447 177 aaKnown RBP4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 SPRY3O43610 288 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 AHCYL1O43865 530 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 LMX1BO60663 402 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 UBOX5O94941 541 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 SOX14O95416 240 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 ABHD16AO95870 558 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 RENP00797 406 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 TGFAP01135 160 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 GASTP01350 101 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 IGHV3-13P01766 116 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 DBHP09172 617 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 TACSTD2P09758 323 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 GAAP10253 952 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 GCH1P30793 250 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 PYCR1P32322 319 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 IFNGR2P38484 337 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 MAGEA2P43356 314 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 GPR6P46095 362 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 GZMKP49863 264 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 ERFP50548 548 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 ZNF81P51508 661 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 CHN2P52757 468 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 MVKQ03426 396 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 SCRN3Q0VDG4 424 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 TSPAN31Q12999 210 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 TRIM25Q14258 630 aaKnown RBP4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 ZNF718Q3SXZ3 478 aa4.91□□□□□ -1.62
HMGB1P20-201ENST00000402555 CHRFAM7AQ494W8 412 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms