RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 C10orf55Q5SWW7 151 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 CCNJQ5T5M9 372 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 TMEM42Q69YG0 159 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 GPR139Q6DWJ6 353 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 RTL6Q6ICC9 239 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 CDC42EP5Q6NZY7 148 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 PNCKQ6P2M8 343 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 NEK5Q6P3R8 708 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 C1orf228Q6PIY5 440 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 CCDC137Q6PK04 289 aaKnown RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 PLET1Q6UQ28 207 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 SBSNQ6UWP8 590 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 CWC27Q6UX04 472 aaKnown RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 BTNL8Q6UX41 500 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 TEX43Q6ZNM6 134 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 TMEM179Q6ZVK1 233 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 ERN2Q76MJ5 926 aaKnown RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 ZNF550Q7Z398 422 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 PEX26Q7Z412 305 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 DCXRQ7Z4W1 244 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 TMEM144Q7Z5S9 345 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 NRARPQ7Z6K4 114 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 SLC26A11Q86WA9 606 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 LRRC28Q86X40 367 aaPredicted RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 LRRC8AQ8IWT6 810 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 TCEAL8Q8IYN2 117 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 SVOPLQ8N434 492 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 GUF1Q8N442 669 aaKnown RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 KIF2BQ8N4N8 673 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 ZADH2Q8N4Q0 377 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 TMEM156Q8N614 296 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 LRRC17Q8N6Y2 441 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 C3orf56Q8N813 242 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 ZNF565Q8N9K5 539 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 C9orf163Q8N9P6 203 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 HSD17B11Q8NBQ5 300 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 TRPV1Q8NER1 839 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 TSPAN14Q8NG11 270 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 NEK11Q8NG66 645 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 OR10AD1Q8NGE0 317 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 OR10P1Q8NGE3 313 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 OR6M1Q8NGM8 313 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 OR1J4Q8NGS1 313 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 OR56B4Q8NH76 319 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 METTL6Q8TCB7 284 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 WFDC5Q8TCV5 224 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 PTPMT1Q8WUK0 201 aaPredicted RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 HEXDCQ8WVB3 486 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 TEKT4Q8WW24 435 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 TCTEX1D2Q8WW35 142 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 MBD3L1Q8WWY6 194 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 ASB17Q8WXJ9 295 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 RAPGEF5Q92565 580 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 TCEAL3Q969E4 200 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 TOP1MTQ969P6 601 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 SNX21Q969T3 373 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 MRGPRFQ96AM1 343 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 TAMM41Q96BW9 452 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 SEH1LQ96EE3 360 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 FAM120BQ96EK7 910 aaKnown RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 PGAP3Q96FM1 320 aaPredicted RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 SLC41A3Q96GZ6 507 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 C8orf48Q96LL4 319 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 SAMD8Q96LT4 415 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 NSMCE2Q96MF7 247 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 SPATA13Q96N96 652 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 ZNF558Q96NG5 402 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 PEBP4Q96S96 227 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 PAFAH2Q99487 392 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 CITED1Q99966 193 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 PYM1Q9BRP8 204 aaKnown RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 TUBGCP2Q9BSJ2 902 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 OSBPL10Q9BXB5 764 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 SLC26A6Q9BXS9 759 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 CRNKL1Q9BZJ0 848 aaKnown RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 TM6SF2Q9BZW4 377 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 MFSD1Q9H3U5 465 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 FN3KQ9H479 309 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 SUDS3Q9H7L9 328 aaPredicted RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 UCK1Q9HA47 277 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 FOLH1BQ9HBA9 442 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 FAM60AQ9NP50 221 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 SLC35C2Q9NQQ7 365 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 FAM114A2Q9NRY5 505 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 GPR173Q9NS66 373 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 GEMIN8Q9NWZ8 242 aaKnown RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 GOLGA6AQ9NYA3 693 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 TAS2R9Q9NYW1 312 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 TAS2R5Q9NYW4 299 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 CALYQ9NYX4 217 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 KCNIP1Q9NZI2 227 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 TMOD2Q9NZR1 351 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 SPATA7Q9P0W8 599 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 GRHPRQ9UBQ7 328 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 CLN8Q9UBY8 286 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 WARS2Q9UGM6 360 aaKnown RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 SHPKQ9UHJ6 478 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 XPO7Q9UIA9 1087 aaKnown RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 NOB1Q9ULX3 412 aaKnown RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 NDRG2Q9UN36 371 aaKnown RBP-0.63□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms