RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 PRAMEF27A3QJZ7 478 aa13.66□□□□□ -0.22
NPHP4-201ENST00000378156 IGHA2P01877 340 aa13.66□□□□□ -0.22
NPHP4-201ENST00000378156 SPI1P17947 270 aa13.66□□□□□ -0.22
NPHP4-201ENST00000378156 OR4Q3Q8NH05 313 aa13.66□□□□□ -0.22
NPHP4-201ENST00000378156 SELENOIQ9C0D9 397 aa13.66□□□□□ -0.22
NPHP4-201ENST00000378156 LHX6Q9UPM6 363 aa13.66□□□□□ -0.22
NPHP4-201ENST00000378156 ATG2BQ96BY7 2078 aa13.66□□□□□ -0.22
NPHP4-201ENST00000378156 EIF4EP06730 217 aaKnown RBP13.66□□□□□ -0.22
NPHP4-201ENST00000378156 PCBP3P57721 371 aaKnown RBP13.66□□□□□ -0.22
NPHP4-201ENST00000378156 ZNF266Q14584 549 aa13.66□□□□□ -0.22
NPHP4-201ENST00000378156 RDH10Q8IZV5 341 aa13.66□□□□□ -0.22
NPHP4-201ENST00000378156 LFNGQ8NES3 379 aa13.66□□□□□ -0.22
NPHP4-201ENST00000378156 OR1J2Q8NGS2 313 aa13.66□□□□□ -0.22
NPHP4-201ENST00000378156 HSD17B8Q92506 261 aa13.66□□□□□ -0.22
NPHP4-201ENST00000378156 COX14Q96I36 57 aa13.66□□□□□ -0.22
NPHP4-201ENST00000378156 CTSVO60911 334 aa13.66□□□□□ -0.22
NPHP4-201ENST00000378156 ZNF93P35789 620 aaPredicted RBP13.66□□□□□ -0.22
NPHP4-201ENST00000378156 DIO1P49895 249 aa13.66□□□□□ -0.22
NPHP4-201ENST00000378156 PRTGQ2VWP7 1150 aa13.66□□□□□ -0.22
NPHP4-201ENST00000378156 EMC4Q5J8M3 183 aa13.66□□□□□ -0.22
NPHP4-201ENST00000378156 GLYATL3Q5SZD4 288 aa13.66□□□□□ -0.22
NPHP4-201ENST00000378156 TAAR8Q969N4 342 aa13.66□□□□□ -0.22
NPHP4-201ENST00000378156 TMEM221A6NGB7 291 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 PCBP4P57723 403 aaKnown RBP13.65□□□□□ -0.22
NPHP4-201ENST00000378156 HIST2H3AQ71DI3 136 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 TMUB2Q71RG4 321 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 OR52I2Q8NH67 350 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 FAM213BQ8TBF2 198 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 YIPF5Q969M3 257 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 MSI2Q96DH6 328 aaKnown RBP13.65□□□□□ -0.22
NPHP4-201ENST00000378156 LRFN5Q96NI6 719 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 NIT2Q9NQR4 276 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 UFSP2Q9NUQ7 469 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 ZNF346Q9UL40 294 aaKnown RBP13.65□□□□□ -0.22
NPHP4-201ENST00000378156 BRWD3Q6RI45 1802 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 A0A1W2PNR3 127 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 OR2J2O76002 312 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 NME2P22392 152 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 BLVRBP30043 206 aaPredicted RBP13.65□□□□□ -0.22
NPHP4-201ENST00000378156 RPL18Q07020 188 aaKnown RBP13.65□□□□□ -0.22
NPHP4-201ENST00000378156 ZNF74Q16587 644 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 OR6M1Q8NGM8 313 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 FAM3DQ96BQ1 224 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 ORAI1Q96D31 301 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 A0A087WZY1 265 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 SHISA7A6NL88 538 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 HOXC4P09017 264 aaPredicted RBP13.65□□□□□ -0.22
NPHP4-201ENST00000378156 SLC2A1P11166 492 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 IL2RGP31785 369 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 CSRP3P50461 194 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 H3F3CQ6NXT2 135 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 LANCL3Q6ZV70 420 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 SFTPA1Q8IWL2 248 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 ZADH2Q8N4Q0 377 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 OR14J1Q9UGF5 321 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 FRG2CA6NGY1 282 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 PRICKLE3O43900 615 aaPredicted RBP13.65□□□□□ -0.22
NPHP4-201ENST00000378156 SIX6O95475 246 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 TPOP07202 933 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 CRYBB2P43320 205 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 EMDP50402 254 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 GRB2P62993 217 aaKnown RBP13.65□□□□□ -0.22
NPHP4-201ENST00000378156 CCL7P80098 99 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 MDGA2Q7Z553 956 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 GPBAR1Q8TDU6 330 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 NKX6-2Q9C056 277 aaPredicted RBP13.65□□□□□ -0.22
NPHP4-201ENST00000378156 NGBQ9NPG2 151 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 SLC52A3Q9NQ40 469 aa13.65□□□□□ -0.22
NPHP4-201ENST00000378156 ECI1P42126 302 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 ZFP36L2P47974 494 aaKnown RBP13.64□□□□□ -0.23
NPHP4-201ENST00000378156 THBS3P49746 956 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 RPS18P62269 152 aaKnown RBP13.64□□□□□ -0.23
NPHP4-201ENST00000378156 EBPQ15125 230 aaKnown RBP13.64□□□□□ -0.23
NPHP4-201ENST00000378156 APH1AQ96BI3 265 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 DYNLRB1Q9NP97 96 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 STEAP1Q9UHE8 339 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 M0QYG6 137 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 IMPA2O14732 288 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 TBX19O60806 448 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 SOD1P00441 154 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 KIR2DL3P43628 341 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 MAP2K6P52564 334 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 HBG1P69891 147 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 HBG2P69892 147 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 OVCH1Q7RTY7 1134 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 NKAIN3Q8N8D7 197 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 ST8SIA4Q92187 359 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 SDSLQ96GA7 329 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 UHRF2Q96PU4 802 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 MED18Q9BUE0 208 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 MENTQ9BUN1 341 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 TMEM9BQ9NQ34 198 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 IL20Q9NYY1 176 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 ARGFXA6NJG6 315 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 RNF212BA8MTL3 300 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 MCRIP1C9JLW8 97 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 ADRB1P08588 477 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 RNF4P78317 190 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 CDK5Q00535 292 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 INSL4Q14641 139 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms