RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 ANKRD10Q9NXR5 420 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 AQP7P3A6NL99 342 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 EMP3P54852 163 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 P2RX3P56373 397 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 C1orf140Q5VVS0 124 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 SLC25A43Q8WUT9 341 aaPredicted RBP11.45□□□□□ -0.58
VPS13A-204ENST00000376634 CTRCQ99895 268 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 CPPED1Q9BRF8 314 aaPredicted RBP11.45□□□□□ -0.58
VPS13A-204ENST00000376634 RNF24Q9Y225 148 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 CD14P08571 375 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 FOXK2Q01167 660 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 GRINAQ7Z429 371 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 PIGTQ969N2 578 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 TAS2R5Q9NYW4 299 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 CACFD1Q9UGQ2 172 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 KPTNQ9Y664 436 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 CSNK1DP48730 415 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.44□□□□□ -0.58
VPS13A-204ENST00000376634 GDF7Q7Z4P5 450 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 COL16A1Q07092 1604 aaPredicted RBP11.44□□□□□ -0.58
VPS13A-204ENST00000376634 SELENOFO60613 162 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 FURINP09958 794 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 REEP5Q00765 189 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 FAM71CQ8NEG0 241 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 OR51F2Q8NH61 342 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 C2CD4CQ8TF44 421 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 NOL4LQ96MY1 436 aaPredicted RBP11.44□□□□□ -0.58
VPS13A-204ENST00000376634 NME2P1O60361 137 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 TPOP07202 933 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 CYC1P08574 325 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 CSNK1EP49674 416 aaKnown RBP11.44□□□□□ -0.58
VPS13A-204ENST00000376634 KDM4DQ6B0I6 523 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 OR5AS1Q8N127 324 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 C11orf42Q8N5U0 333 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 ARRDC3Q96B67 414 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 ACTR3CQ9C0K3 210 aaPredicted RBP11.44□□□□□ -0.58
VPS13A-204ENST00000376634 ZNF236Q9UL36 1845 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 SMIM21Q3B7S5 101 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 ATP13A2Q9NQ11 1180 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 LHX3Q9UBR4 397 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 POLDIP2Q9Y2S7 368 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 ALS2Q96Q42 1657 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 H7BYZ3 331 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 LALBAP00709 142 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 CYBAP13498 195 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 KLHDC1Q8N7A1 406 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 NTNG1Q9Y2I2 539 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 ZNF724A8MTY0 619 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 OR5G3P0C626 314 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 TMEFF1Q8IYR6 380 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 NDRG4Q9ULP0 352 aaKnown RBP11.44□□□□□ -0.58
VPS13A-204ENST00000376634 CPEP16870 476 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 ENDOGQ14249 297 aaKnown RBP11.44□□□□□ -0.58
VPS13A-204ENST00000376634 DOK3Q7L591 496 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 CHRDL1Q9BU40 450 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 PRSS21Q9Y6M0 314 aa11.44□□□□□ -0.58
VPS13A-204ENST00000376634 H0YIV9 168 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 ADRA2CP18825 462 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 EN2P19622 333 aaPredicted RBP11.43□□□□□ -0.58
VPS13A-204ENST00000376634 RFC3P40938 356 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 C15orf39Q6ZRI6 1047 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 PAPLNO95428 1278 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 ATP1B1P05026 303 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 G0S2P27469 103 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 CALCRP30988 508 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 SNRPGP62308 76 aaKnown RBP11.43□□□□□ -0.58
VPS13A-204ENST00000376634 ZFP62Q8NB50 900 aaPredicted RBP11.43□□□□□ -0.58
VPS13A-204ENST00000376634 OR10AD1Q8NGE0 317 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 SLC25A46Q96AG3 418 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 MED18Q9BUE0 208 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 GOSR1O95249 250 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 APOBEC1P41238 236 aaKnown RBP11.43□□□□□ -0.58
VPS13A-204ENST00000376634 LHFPL2Q6ZUX7 228 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 OR2T6Q8NHC8 308 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 TMEM255BQ8WV15 326 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 TNFRSF13CQ96RJ3 184 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 CABLES2Q9BTV7 478 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 CHST11Q9NPF2 352 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 B3GALT5Q9Y2C3 310 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 DBX1A6NMT0 343 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 CTDSP2O14595 271 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 EDAQ92838 391 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 TMEM18Q96B42 140 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 CACNA1HO95180 2353 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 PSME4Q14997 1843 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 DCTN6O00399 190 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 OR2J3O76001 311 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 TBPL2Q6SJ96 375 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 TMEM182Q6ZP80 229 aaPredicted RBP11.43□□□□□ -0.58
VPS13A-204ENST00000376634 TMEM130Q8N3G9 435 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 PDGFBP01127 241 aaPredicted RBP11.43□□□□□ -0.58
VPS13A-204ENST00000376634 NRG4Q8WWG1 115 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 ST8SIA2Q92186 375 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 VAMP8Q9BV40 100 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 DUSP22Q9NRW4 184 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 THEM4Q5T1C6 240 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 ANGPTL5Q86XS5 388 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 ZNF573Q86YE8 665 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 PFN4Q8NHR9 129 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms