RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 SPHK1Q9NYA1 384 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 NXT1Q9UKK6 140 aaKnown RBP11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 PPT2Q9UMR5 302 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 PRELID3BQ9Y3B1 194 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 H7BYZ3 331 aa11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 TSPAN12O95859 305 aa11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 SOD1P00441 154 aa11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 METTL15P1P0C7V9 234 aa11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 DUSP1P28562 367 aa11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 SLC19A1P41440 591 aa11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 NKX2-1P43699 371 aaPredicted RBP11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 MRPL19P49406 292 aaKnown RBP11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 P2RX1P51575 399 aa11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 YOD1Q5VVQ6 348 aaPredicted RBP11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 OR2L13Q8N349 312 aa11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 PLEKHF2Q9H8W4 249 aa11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 ERVMER34-1Q9H9K5 563 aa11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 SPACA1Q9HBV2 294 aa11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 LYRM4Q9HD34 91 aa11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 HEYLQ9NQ87 328 aaPredicted RBP11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 FGF21Q9NSA1 209 aa11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 ACOXLQ9NUZ1 547 aa11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 CHST2Q9Y4C5 530 aa11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 WDR87Q6ZQQ6 2873 aa11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 F5P12259 2224 aa11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 MT-ATP6P00846 226 aa11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 HOXD11P31277 338 aaPredicted RBP11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 CD80P33681 288 aa11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 CLDN20P56880 219 aa11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 SLC16A11Q8NCK7 471 aa11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 PFN4Q8NHR9 129 aa11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 SP7Q8TDD2 431 aaPredicted RBP11.21□□□□□ -0.61
NPLOC4-202ENST00000374747 NXPH3O95157 252 aa11.21□□□□□ -0.62
NPLOC4-202ENST00000374747 CPN1P15169 458 aa11.21□□□□□ -0.62
NPLOC4-202ENST00000374747 PDZD11Q5EBL8 140 aa11.21□□□□□ -0.62
NPLOC4-202ENST00000374747 TMED6Q8WW62 240 aa11.21□□□□□ -0.62
NPLOC4-202ENST00000374747 ST8SIA2Q92186 375 aa11.21□□□□□ -0.62
NPLOC4-202ENST00000374747 Q96M85 177 aa11.21□□□□□ -0.62
NPLOC4-202ENST00000374747 PARP12Q9H0J9 701 aaKnown RBP11.21□□□□□ -0.62
NPLOC4-202ENST00000374747 AK3Q9UIJ7 227 aa11.21□□□□□ -0.62
NPLOC4-202ENST00000374747 H0Y8G0 127 aa11.21□□□□□ -0.62
NPLOC4-202ENST00000374747 TGOLN2O43493 480 aa11.21□□□□□ -0.62
NPLOC4-202ENST00000374747 TRAF3IP2O43734 574 aaPredicted RBP11.21□□□□□ -0.62
NPLOC4-202ENST00000374747 NME2P1O60361 137 aa11.21□□□□□ -0.62
NPLOC4-202ENST00000374747 EIF1BO60739 113 aaKnown RBP11.21□□□□□ -0.62
NPLOC4-202ENST00000374747 CYTIPO60759 359 aa11.21□□□□□ -0.62
NPLOC4-202ENST00000374747 ABHD16AO95870 558 aa11.21□□□□□ -0.62
NPLOC4-202ENST00000374747 CEACAM5P06731 702 aa11.21□□□□□ -0.62
NPLOC4-202ENST00000374747 EXOSC2Q13868 293 aaKnown RBP11.21□□□□□ -0.62
NPLOC4-202ENST00000374747 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.21□□□□□ -0.62
NPLOC4-202ENST00000374747 TCTN1Q2MV58 587 aa11.21□□□□□ -0.62
NPLOC4-202ENST00000374747 ZNF620Q6ZNG0 422 aa11.21□□□□□ -0.62
NPLOC4-202ENST00000374747 RBM45Q8IUH3 476 aaKnown RBP11.21□□□□□ -0.62
NPLOC4-202ENST00000374747 OR11L1Q8NGX0 322 aa11.21□□□□□ -0.62
NPLOC4-202ENST00000374747 OR8U1Q8NH10 309 aa11.21□□□□□ -0.62
NPLOC4-202ENST00000374747 ZAR1LA6NP61 321 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 CTNSO60931 367 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 IL34Q6ZMJ4 242 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 NKAIN4Q8IVV8 208 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 TMEM99Q8N816 258 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 ZBTB44Q8NCP5 570 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 ZNF775Q96BV0 537 aaPredicted RBP11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 INTS12Q96CB8 462 aaKnown RBP11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 STACQ99469 402 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 USB1Q9BQ65 265 aaKnown RBP11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 STRAPQ9Y3F4 350 aaKnown RBP11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 TUBAL3A6NHL2 446 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 OR8U8P0C7N1 319 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 LIPNQ5VXI9 398 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 SYT13Q7L8C5 426 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 OLIG3Q7RTU3 272 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 OR1J2Q8NGS2 313 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 SLCO4A1Q96BD0 722 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 MS4A6EQ96DS6 147 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 FAM234AQ9H0X4 552 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 ZNF331Q9NQX6 463 aaPredicted RBP11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 MED9Q9NWA0 146 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 SLC17A4Q9Y2C5 497 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 NOSIPQ9Y314 301 aaKnown RBP11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 ASB1Q9Y576 335 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 WDR90Q96KV7 1748 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 TMEM235A6NFC5 223 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 NXPH2O95156 264 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 ADRA2CP18825 462 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 RAD52P43351 418 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 DCDP81605 110 aaKnown RBP11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 B4GALNT1Q00973 533 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 FAM109BQ6ICB4 259 aaPredicted RBP11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 CATSPERDQ86XM0 798 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 GABRG1Q8N1C3 465 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 FAM71CQ8NEG0 241 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 ZNF680Q8NEM1 530 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 FOXQ1Q9C009 403 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 DYNLRB1Q9NP97 96 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 OR6C68A6NDL8 312 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 HSD17B6O14756 317 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 RGS11O94810 467 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 GZMKP49863 264 aa11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 ELLP55199 621 aaPredicted RBP11.2□□□□□ -0.62
NPLOC4-202ENST00000374747 RNF151Q2KHN1 245 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms