RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 CALCBP10092 127 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 LYPD8Q6UX82 237 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 PXT1Q8NFP0 134 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 ZMAT3Q9HA38 289 aaKnown RBP14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 CTSFQ9UBX1 484 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 SLC23A1Q9UHI7 598 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 NDUFB3O43676 98 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 SMIM21Q3B7S5 101 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 SAXO2Q658L1 398 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 BTNL8Q6UX41 500 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 ANKRD33Q7Z3H0 272 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 ENTHD1Q8IYW4 607 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 SLC38A9Q8NBW4 561 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 SFT2D1Q8WV19 159 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 SLC35D1Q9NTN3 355 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 SLC5A6Q9Y289 635 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 ST8SIA5O15466 376 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 KLK10O43240 276 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 OR5I1Q13606 314 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 HTR4Q13639 388 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 TMEM81Q6P7N7 255 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 ZNF705AQ6ZN79 300 aaPredicted RBP14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 LILRA3Q8N6C8 439 aaPredicted RBP14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 FAM173AQ9BQD7 235 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 NAV1Q8NEY1 1877 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 A0A1W2PPC4 97 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 XRCC3O43542 346 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 TCRBP04435 133 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 POU3F3P20264 500 aaPredicted RBP14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 SDHAP31040 664 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 RPL13AP40429 203 aaKnown RBP14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 CCSMST1Q4G0I0 132 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 RPL7L1Q6DKI1 246 aaKnown RBP14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 TMEM207Q6UWW9 146 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 RHOXF1Q8NHV9 184 aa14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 ZNF2Q9BSG1 426 aaPredicted RBP14.32□□□□□ -0.12
NUCKS1-201ENST00000367142 ACOT6Q3I5F7 207 aaPredicted RBP14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 ROBO4Q8WZ75 1007 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 TAF9BQ9HBM6 251 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 NPAP1Q9NZP6 1156 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 ONECUT1Q9UBC0 465 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 GAB2Q9UQC2 676 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 OR2B11Q5JQS5 317 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 ZNF784Q8NCA9 323 aaPredicted RBP14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 AKR1E2Q96JD6 320 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 IGLV3-10A0A075B6K4 115 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 OR2J2O76002 312 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 TNFRSF1AP19438 455 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 OR10K2Q6IF99 312 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 CAMKMTQ7Z624 323 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 OR10P1Q8NGE3 313 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 OR2T6Q8NHC8 308 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 RDH5Q92781 318 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 TINAGL1Q9GZM7 467 aaPredicted RBP14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 SCPEP1Q9HB40 452 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 ASIC5Q9NY37 505 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 K7ESM1 405 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 TSPAN12O95859 305 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 PCSK6P29122 969 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 OR52H1Q8NGJ2 320 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 MOB3AQ96BX8 217 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 RBFOX1Q9NWB1 397 aaKnown RBP14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 MYH2Q9UKX2 1941 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 IGHV3-64DA0A0J9YX35 117 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 SHBQ15464 509 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 HIST2H3AQ71DI3 136 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 RANGRFQ9HD47 186 aaPredicted RBP14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 KCNG2Q9UJ96 466 aa14.31□□□□□ -0.12
NUCKS1-201ENST00000367142 ACOT8O14734 319 aa14.3□□□□□ -0.12
NUCKS1-201ENST00000367142 ACKR1Q16570 336 aa14.3□□□□□ -0.12
NUCKS1-201ENST00000367142 SLC51BQ86UW2 128 aa14.3□□□□□ -0.12
NUCKS1-201ENST00000367142 OR2V1Q8NHB1 315 aa14.3□□□□□ -0.12
NUCKS1-201ENST00000367142 FBXO17Q96EF6 278 aa14.3□□□□□ -0.12
NUCKS1-201ENST00000367142 ZNF251Q9BRH9 671 aa14.3□□□□□ -0.12
NUCKS1-201ENST00000367142 CYC1P08574 325 aa14.3□□□□□ -0.12
NUCKS1-201ENST00000367142 ZGLP1P0C6A0 271 aa14.3□□□□□ -0.12
NUCKS1-201ENST00000367142 SNRPGP62308 76 aaKnown RBP14.3□□□□□ -0.12
NUCKS1-201ENST00000367142 TMEM182Q6ZP80 229 aaPredicted RBP14.3□□□□□ -0.12
NUCKS1-201ENST00000367142 TRILQ7L0X0 811 aa14.3□□□□□ -0.12
NUCKS1-201ENST00000367142 C17orf78Q8N4C9 275 aa14.3□□□□□ -0.12
NUCKS1-201ENST00000367142 WFDC5Q8TCV5 224 aa14.3□□□□□ -0.12
NUCKS1-201ENST00000367142 CIB3Q96Q77 187 aaPredicted RBP14.3□□□□□ -0.12
NUCKS1-201ENST00000367142 TRGV10A0A0A0MS01 117 aa14.3□□□□□ -0.12
NUCKS1-201ENST00000367142 NCBP2LA6PVI3 153 aaKnown RBP14.3□□□□□ -0.12
NUCKS1-201ENST00000367142 WDR1O75083 606 aa14.3□□□□□ -0.12
NUCKS1-201ENST00000367142 ACOXLQ9NUZ1 547 aa14.3□□□□□ -0.12
NUCKS1-201ENST00000367142 FLVCR1Q9Y5Y0 555 aa14.3□□□□□ -0.12
NUCKS1-201ENST00000367142 NIPSNAP1Q9BPW8 284 aa14.3□□□□□ -0.12
NUCKS1-201ENST00000367142 ACTR3CQ9C0K3 210 aaPredicted RBP14.3□□□□□ -0.12
NUCKS1-201ENST00000367142 I6L893 689 aaPredicted RBP14.3□□□□□ -0.12
NUCKS1-201ENST00000367142 MOB3BQ86TA1 216 aa14.3□□□□□ -0.12
NUCKS1-201ENST00000367142 EDARADDQ8WWZ3 215 aa14.3□□□□□ -0.12
NUCKS1-201ENST00000367142 TSLPQ969D9 159 aa14.3□□□□□ -0.12
NUCKS1-201ENST00000367142 CBR3O75828 277 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 CCR9P51686 369 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 SPANXN5Q5MJ07 72 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 SDF2Q99470 211 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 S1PR5Q9H228 398 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 RNF150Q9ULK6 438 aa14.29□□□□□ -0.12
NUCKS1-201ENST00000367142 COX7A2P2O60397 106 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms