RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 SKA3Q8IX90 412 aa15.82■□□□□ 0.12
CCDC7-203ENST00000362006 OR1K1Q8NGR3 316 aa15.82■□□□□ 0.12
CCDC7-203ENST00000362006 PIGMQ9H3S5 423 aa15.82■□□□□ 0.12
CCDC7-203ENST00000362006 ST6GALNAC2Q9UJ37 374 aa15.82■□□□□ 0.12
CCDC7-203ENST00000362006 E9PI62 339 aa15.81■□□□□ 0.12
CCDC7-203ENST00000362006 ATXN7O15265 892 aaPredicted RBP15.81■□□□□ 0.12
CCDC7-203ENST00000362006 HOXB1P14653 301 aaPredicted RBP15.81■□□□□ 0.12
CCDC7-203ENST00000362006 GABRA5P31644 462 aa15.81■□□□□ 0.12
CCDC7-203ENST00000362006 P2RY6Q15077 328 aa15.81■□□□□ 0.12
CCDC7-203ENST00000362006 CDK5R1Q15078 307 aa15.81■□□□□ 0.12
CCDC7-203ENST00000362006 INTS1Q8N201 2190 aaKnown RBP15.81■□□□□ 0.12
CCDC7-203ENST00000362006 NAXEQ8NCW5 288 aa15.81■□□□□ 0.12
CCDC7-203ENST00000362006 BOD1Q96IK1 185 aa15.81■□□□□ 0.12
CCDC7-203ENST00000362006 DDX28Q9NUL7 540 aaKnown RBP15.81■□□□□ 0.12
CCDC7-203ENST00000362006 ZNF629Q9UEG4 869 aaPredicted RBP15.81■□□□□ 0.12
CCDC7-203ENST00000362006 GPRIN2O60269 458 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 RPP14O95059 124 aaKnown RBP15.8■□□□□ 0.12
CCDC7-203ENST00000362006 GABARAPO95166 117 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 RAB35Q15286 201 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 ZNF829Q3KNS6 432 aaPredicted RBP15.8■□□□□ 0.12
CCDC7-203ENST00000362006 ELFN2Q5R3F8 820 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 C9orf135Q5VTT2 229 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 FOXB2Q5VYV0 432 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 OR7E24Q6IFN5 339 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 SPATC1Q76KD6 591 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 MS4A15Q8N5U1 240 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 C1orf162Q8NEQ5 155 aaPredicted RBP15.8■□□□□ 0.12
CCDC7-203ENST00000362006 OR10S1Q8NGN2 331 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 RPS4Y2Q8TD47 263 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 NANOS1Q8WY41 292 aaKnown RBP15.8■□□□□ 0.12
CCDC7-203ENST00000362006 BCL2L2Q92843 193 aaPredicted RBP15.8■□□□□ 0.12
CCDC7-203ENST00000362006 ISOC1Q96CN7 298 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 SMIM19Q96E16 107 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 DOK1Q99704 481 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 COQ7Q99807 217 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 HDHD2Q9H0R4 259 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 PNRC2Q9NPJ4 139 aaKnown RBP15.8■□□□□ 0.12
CCDC7-203ENST00000362006 SHANK1Q9Y566 2161 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 TRBV2A0A0J9YWF9 115 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 SGCEO43556 437 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 AIREO43918 545 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 APOC1P02654 83 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 COX5AP20674 150 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 GALP22466 123 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 IGHV1-2P23083 117 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 ARR3P36575 388 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 PSMB10P40306 273 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 CA7P43166 264 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 CCR9P51686 369 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 FOXG1P55316 489 aaPredicted RBP15.8■□□□□ 0.12
CCDC7-203ENST00000362006 ALKBH1Q13686 389 aaKnown RBP15.8■□□□□ 0.12
CCDC7-203ENST00000362006 ZFP41Q8N8Y5 198 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 ZNF610Q8N9Z0 462 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 ATF6BQ99941 703 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 GALNT8Q9NY28 637 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 PLEK2Q9NYT0 353 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 STUB1Q9UNE7 303 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 GRIP1Q9Y3R0 1128 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 SIRT4Q9Y6E7 314 aaPredicted RBP15.8■□□□□ 0.12
CCDC7-203ENST00000362006 R4GMQ9 66 aa15.8■□□□□ 0.12
CCDC7-203ENST00000362006 TRGV8A0A0C4DH27 118 aa15.79■□□□□ 0.12
CCDC7-203ENST00000362006 HLA-DPB1P04440 258 aa15.79■□□□□ 0.12
CCDC7-203ENST00000362006 ZNF32P17041 273 aa15.79■□□□□ 0.12
CCDC7-203ENST00000362006 GADD45AP24522 165 aa15.79■□□□□ 0.12
CCDC7-203ENST00000362006 HSD11B1P28845 292 aa15.79■□□□□ 0.12
CCDC7-203ENST00000362006 CCDC92Q53HC0 331 aaPredicted RBP15.79■□□□□ 0.12
CCDC7-203ENST00000362006 ARL9Q6T311 187 aa15.79■□□□□ 0.12
CCDC7-203ENST00000362006 ALDH16A1Q8IZ83 802 aa15.79■□□□□ 0.12
CCDC7-203ENST00000362006 GABRG1Q8N1C3 465 aa15.79■□□□□ 0.12
CCDC7-203ENST00000362006 ZNF433Q8N7K0 673 aaPredicted RBP15.79■□□□□ 0.12
CCDC7-203ENST00000362006 RNF121Q9H920 327 aa15.79■□□□□ 0.12
CCDC7-203ENST00000362006 ATPIF1Q9UII2 106 aa15.79■□□□□ 0.12
CCDC7-203ENST00000362006 SSR3Q9UNL2 185 aa15.79■□□□□ 0.12
CCDC7-203ENST00000362006 SF3B6Q9Y3B4 125 aaKnown RBP15.79■□□□□ 0.12
CCDC7-203ENST00000362006 BSNQ9UPA5 3926 aa15.79■□□□□ 0.12
CCDC7-203ENST00000362006 PNMA8CA0A1B0GUJ8 204 aa15.79■□□□□ 0.12
CCDC7-203ENST00000362006 CIB4A0PJX0 185 aa15.79■□□□□ 0.12
CCDC7-203ENST00000362006 MSTNO14793 375 aa15.79■□□□□ 0.12
CCDC7-203ENST00000362006 UBL3O95164 117 aa15.79■□□□□ 0.12
CCDC7-203ENST00000362006 MMP7P09237 267 aaPredicted RBP15.79■□□□□ 0.12
CCDC7-203ENST00000362006 MMP16P51512 607 aa15.79■□□□□ 0.12
CCDC7-203ENST00000362006 TMEM53Q6P2H8 277 aa15.79■□□□□ 0.12
CCDC7-203ENST00000362006 SLC16A12Q6ZSM3 486 aa15.79■□□□□ 0.12
CCDC7-203ENST00000362006 OR2G2Q8NGZ5 317 aa15.79■□□□□ 0.12
CCDC7-203ENST00000362006 RND1Q92730 232 aa15.79■□□□□ 0.12
CCDC7-203ENST00000362006 RNF166Q96A37 237 aaPredicted RBP15.79■□□□□ 0.12
CCDC7-203ENST00000362006 DMRTA2Q96SC8 542 aa15.79■□□□□ 0.12
CCDC7-203ENST00000362006 KCNJ15Q99712 375 aa15.79■□□□□ 0.12
CCDC7-203ENST00000362006 OR2H1Q9GZK4 316 aa15.79■□□□□ 0.12
CCDC7-203ENST00000362006 MEMO1Q9Y316 297 aa15.79■□□□□ 0.12
CCDC7-203ENST00000362006 ATRXP46100 2492 aa15.79■□□□□ 0.12
CCDC7-203ENST00000362006 A0A096LPE4 126 aa15.78■□□□□ 0.12
CCDC7-203ENST00000362006 A0A0G2JNJ9 132 aa15.78■□□□□ 0.12
CCDC7-203ENST00000362006 A0A1W2PPZ6 126 aa15.78■□□□□ 0.12
CCDC7-203ENST00000362006 ACOD1A6NK06 481 aa15.78■□□□□ 0.12
CCDC7-203ENST00000362006 WNT11O96014 354 aa15.78■□□□□ 0.12
CCDC7-203ENST00000362006 GDI2P50395 445 aaKnown RBP15.78■□□□□ 0.12
CCDC7-203ENST00000362006 SPTSSAQ969W0 71 aa15.78■□□□□ 0.12
CCDC7-203ENST00000362006 NAA50Q9GZZ1 169 aaKnown RBP15.78■□□□□ 0.12
CCDC7-203ENST00000362006 OPN3Q9H1Y3 402 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms