RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 GRPEL2Q8TAA5 225 aa12.35□□□□□ -0.43
SMC6-201ENST00000351948 SECTM1Q8WVN6 248 aa12.35□□□□□ -0.43
SMC6-201ENST00000351948 SPTAN1Q13813 2472 aaKnown RBP12.35□□□□□ -0.43
SMC6-201ENST00000351948 MPPED1O15442 326 aa12.35□□□□□ -0.43
SMC6-201ENST00000351948 INSM1Q01101 510 aaPredicted RBP12.35□□□□□ -0.43
SMC6-201ENST00000351948 SAP25Q8TEE9 199 aa12.35□□□□□ -0.43
SMC6-201ENST00000351948 CRYAAP02489 173 aa12.35□□□□□ -0.43
SMC6-201ENST00000351948 GAAP10253 952 aa12.35□□□□□ -0.43
SMC6-201ENST00000351948 PIPP12273 146 aaPredicted RBP12.35□□□□□ -0.43
SMC6-201ENST00000351948 SPINK2P20155 84 aa12.35□□□□□ -0.43
SMC6-201ENST00000351948 GALNSP34059 522 aa12.35□□□□□ -0.43
SMC6-201ENST00000351948 FABP5Q01469 135 aa12.35□□□□□ -0.43
SMC6-201ENST00000351948 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.35□□□□□ -0.43
SMC6-201ENST00000351948 FBXW12Q6X9E4 464 aa12.35□□□□□ -0.43
SMC6-201ENST00000351948 OR11L1Q8NGX0 322 aa12.35□□□□□ -0.43
SMC6-201ENST00000351948 TMEM246Q9BRR3 403 aa12.35□□□□□ -0.43
SMC6-201ENST00000351948 IL20Q9NYY1 176 aa12.35□□□□□ -0.43
SMC6-201ENST00000351948 PTTG3PQ9NZH4 202 aa12.35□□□□□ -0.43
SMC6-201ENST00000351948 FAM221AA4D161 298 aa12.35□□□□□ -0.43
SMC6-201ENST00000351948 TFP02787 698 aa12.35□□□□□ -0.43
SMC6-201ENST00000351948 TK1P04183 234 aa12.35□□□□□ -0.43
SMC6-201ENST00000351948 SCGB1C1Q8TD33 95 aa12.35□□□□□ -0.43
SMC6-201ENST00000351948 CPNE4Q96A23 557 aaPredicted RBP12.35□□□□□ -0.43
SMC6-201ENST00000351948 FAIMQ9NVQ4 179 aa12.35□□□□□ -0.43
SMC6-201ENST00000351948 STEAP1Q9UHE8 339 aa12.35□□□□□ -0.43
SMC6-201ENST00000351948 RP2O75695 350 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 FTH1P19P0C7X4 201 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 PTAFRP25105 342 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 C9orf40Q8IXQ3 194 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 OR6C68A6NDL8 312 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 TAS2R19P59542 299 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 HEPHL1Q6MZM0 1159 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 IDO2Q6ZQW0 420 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 CCDC71LQ8N9Z2 235 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 EMG1Q92979 244 aaKnown RBP12.34□□□□□ -0.43
SMC6-201ENST00000351948 ZNF681Q96N22 645 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 GLTPQ9NZD2 209 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 CT45A8P0DMV1 189 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 CT45A9P0DMV2 189 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 GLI4P10075 376 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 ZNF121P58317 390 aaPredicted RBP12.34□□□□□ -0.43
SMC6-201ENST00000351948 CT45A2Q5DJT8 189 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 OPALINQ96PE5 141 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 FOXB1Q99853 325 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 PRRT1Q99946 306 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 CDCA4Q9BXL8 241 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 ZNF286AQ9HBT8 521 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 RDH8Q9NYR8 311 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 C4orf51C9J302 202 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 RER1O15258 196 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 HLA-AP01891 365 aaKnown RBP12.34□□□□□ -0.43
SMC6-201ENST00000351948 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.34□□□□□ -0.43
SMC6-201ENST00000351948 DOK3Q7L591 496 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 SNAPC3Q92966 411 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 PPP1R14BQ96C90 147 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 FBXL2Q9UKC9 423 aa12.34□□□□□ -0.43
SMC6-201ENST00000351948 A0A1B0GTH9 108 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 A0A1W2PQM1 296 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 OR2M5A3KFT3 312 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 ATP6V1G1O75348 118 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 MPZL1O95297 269 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 SRP9P49458 86 aaKnown RBP12.33□□□□□ -0.44
SMC6-201ENST00000351948 GPR176Q14439 515 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 SLC17A1Q14916 467 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 OR8G1Q15617 311 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 TMPRSS11FQ6ZWK6 438 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 PLPP5Q8NEB5 264 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 NOXO1Q8NFA2 376 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 OR6M1Q8NGM8 313 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 OR1S1Q8NH92 325 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 PBOV1Q9GZY1 135 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 A0A0G2JMP0 313 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 TCRBV16S1A1N1A0A5B0 115 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 ARRDC5A6NEK1 342 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 I3L521 148 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 PMP2P02689 132 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 MAGEA5P43359 124 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 STEAP3Q658P3 488 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 OR4M2Q8NGB6 313 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 GLYATL2Q8WU03 294 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 FAM117AQ9C073 453 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 PPA2Q9H2U2 334 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 OR51J1Q9H342 316 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 FUOMA2VDF0 154 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 CCL2P13500 99 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 CPT2P23786 658 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 MRPS10P82664 201 aaKnown RBP12.33□□□□□ -0.44
SMC6-201ENST00000351948 SHBQ15464 509 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 MRGPREQ86SM8 312 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 OR51F2Q8NH61 342 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 DNASE2BQ8WZ79 361 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 RDH5Q92781 318 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 KISS1RQ969F8 398 aaPredicted RBP12.33□□□□□ -0.44
SMC6-201ENST00000351948 PPIL3Q9H2H8 161 aaKnown RBP12.33□□□□□ -0.44
SMC6-201ENST00000351948 PLCXD1Q9NUJ7 323 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 FFAR1O14842 300 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 PRICKLE3O43900 615 aaPredicted RBP12.33□□□□□ -0.44
SMC6-201ENST00000351948 ACHEP22303 614 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 CCR6P51684 374 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 INSL4Q14641 139 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms