RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 CD38P28907 300 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 VWA2Q5GFL6 755 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 TCEAL6Q6IPX3 200 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 OR52N5Q8NH56 324 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 ZPLD1Q8TCW7 415 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 FAM60AQ9NP50 221 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 KCNJ16Q9NPI9 418 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 HMSDA8MTL9 139 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 ZNF254O75437 659 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 THY1P04216 161 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 PLA2G7Q13093 441 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 TUSC1Q2TAM9 212 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 PAN3Q58A45 887 aaKnown RBP14.05□□□□□ -0.16
PTPRU-201ENST00000345512 TRILQ7L0X0 811 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 PLA2G2FQ9BZM2 168 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 MED29Q9NX70 200 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 UBE2J1Q9Y385 318 aaPredicted RBP14.05□□□□□ -0.16
PTPRU-201ENST00000345512 IGHV3-20A0A0C4DH32 117 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 GNB3P16520 340 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 DHRS2Q13268 280 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 RAB30Q15771 203 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 MARCH1Q8TCQ1 289 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 TXNIPQ9H3M7 391 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 SLC7A11Q9UPY5 501 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 PCDHGA5Q9Y5G8 931 aa14.05□□□□□ -0.16
PTPRU-201ENST00000345512 TLCD2A6NGC4 264 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 AQP8O94778 261 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 KLK3P07288 261 aaPredicted RBP14.04□□□□□ -0.16
PTPRU-201ENST00000345512 ALOX5APP20292 161 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 ELAVL1Q15717 326 aaKnown RBP14.04□□□□□ -0.16
PTPRU-201ENST00000345512 ACTBL2Q562R1 376 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 OR52W1Q6IF63 320 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 H1FNTQ75WM6 255 aaPredicted RBP14.04□□□□□ -0.16
PTPRU-201ENST00000345512 NR2C2APQ86WQ0 139 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 SYT3Q9BQG1 590 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 FAM230AA0A1W2PPH8 454 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 HSPB2A8KAH6 182 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 CNR1P21554 472 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 PPA1Q15181 289 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 HSPB2Q16082 182 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 PRTGQ2VWP7 1150 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 C11orf87Q6NUJ2 197 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 C5orf46Q6UWT4 87 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 TMEM229BQ8NBD8 167 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 ELSPBP1Q96BH3 223 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 ANKRD9Q96BM1 317 aaPredicted RBP14.04□□□□□ -0.16
PTPRU-201ENST00000345512 S1PR5Q9H228 398 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 C9J4A7 227 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 CYR61O00622 381 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 SSX5O60225 188 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 CXCL2P19875 107 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 EPHA4P54764 986 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 TAS2R46P59540 309 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 ZNF141Q15928 474 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 IAH1Q2TAA2 248 aaPredicted RBP14.04□□□□□ -0.16
PTPRU-201ENST00000345512 ZNF529Q6P280 563 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 LYG2Q86SG7 212 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 OR1M1Q8NGA1 313 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 TSPAN32Q96QS1 320 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 ZNF768Q9H5H4 540 aaKnown RBP14.04□□□□□ -0.16
PTPRU-201ENST00000345512 SPAG17Q6Q759 2223 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 TMEM272A0A1B0GTI8 110 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 BCL2L11O43521 198 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 CHRM2P08172 466 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 ACAA2P42765 397 aaKnown RBP14.04□□□□□ -0.16
PTPRU-201ENST00000345512 FLI1Q01543 452 aaPredicted RBP14.04□□□□□ -0.16
PTPRU-201ENST00000345512 C17orf67Q0P5P2 114 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 MEX3BQ6ZN04 569 aaKnown RBP14.04□□□□□ -0.16
PTPRU-201ENST00000345512 ZFP82Q8N141 532 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 CLRN3Q8NCR9 226 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 OR51A4Q8NGJ6 313 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 OR51E1Q8TCB6 317 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 CRB3Q9BUF7 120 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 KCNE5Q9UJ90 142 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 R4GMQ9 66 aa14.04□□□□□ -0.16
PTPRU-201ENST00000345512 TRBV11-1A0A0K0K1C0 115 aa14.03□□□□□ -0.16
PTPRU-201ENST00000345512 MPC2O95563 127 aa14.03□□□□□ -0.16
PTPRU-201ENST00000345512 WNT11O96014 354 aa14.03□□□□□ -0.16
PTPRU-201ENST00000345512 LCATP04180 440 aa14.03□□□□□ -0.16
PTPRU-201ENST00000345512 DHPSP49366 369 aaPredicted RBP14.03□□□□□ -0.16
PTPRU-201ENST00000345512 SSBP1Q04837 148 aaKnown RBP14.03□□□□□ -0.16
PTPRU-201ENST00000345512 DLX2Q07687 328 aaPredicted RBP14.03□□□□□ -0.16
PTPRU-201ENST00000345512 FAM53BQ14153 422 aa14.03□□□□□ -0.16
PTPRU-201ENST00000345512 B3GNTL1Q67FW5 361 aaPredicted RBP14.03□□□□□ -0.16
PTPRU-201ENST00000345512 SPRED2Q7Z698 418 aa14.03□□□□□ -0.16
PTPRU-201ENST00000345512 BAP18Q8IXM2 172 aa14.03□□□□□ -0.16
PTPRU-201ENST00000345512 SNIP1Q8TAD8 396 aaKnown RBP14.03□□□□□ -0.16
PTPRU-201ENST00000345512 SUSD2Q9UGT4 822 aa14.03□□□□□ -0.16
PTPRU-201ENST00000345512 LRP12Q9Y561 859 aa14.03□□□□□ -0.16
PTPRU-201ENST00000345512 ZNF217O75362 1048 aa14.03□□□□□ -0.16
PTPRU-201ENST00000345512 GFERP55789 205 aa14.03□□□□□ -0.16
PTPRU-201ENST00000345512 PDZK1IP1Q13113 114 aa14.03□□□□□ -0.16
PTPRU-201ENST00000345512 TMEM176BQ3YBM2 270 aaPredicted RBP14.03□□□□□ -0.16
PTPRU-201ENST00000345512 DMRTC1Q5HYR2 192 aa14.03□□□□□ -0.16
PTPRU-201ENST00000345512 AVPI1Q5T686 147 aa14.03□□□□□ -0.16
PTPRU-201ENST00000345512 CHRDL2Q6WN34 429 aa14.03□□□□□ -0.16
PTPRU-201ENST00000345512 MCEMP1Q8IX19 187 aa14.03□□□□□ -0.16
PTPRU-201ENST00000345512 FAM174AQ8TBP5 190 aa14.03□□□□□ -0.16
PTPRU-201ENST00000345512 C2CD4CQ8TF44 421 aa14.03□□□□□ -0.16
PTPRU-201ENST00000345512 PARP12Q9H0J9 701 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms