RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 ANOS1P23352 680 aa12.42□□□□□ -0.42
PPP1CA-201ENST00000312989 GGT2P36268 569 aa12.42□□□□□ -0.42
PPP1CA-201ENST00000312989 CCL8P80075 99 aa12.42□□□□□ -0.42
PPP1CA-201ENST00000312989 COX10Q12887 443 aa12.42□□□□□ -0.42
PPP1CA-201ENST00000312989 RASSF6Q6ZTQ3 369 aa12.42□□□□□ -0.42
PPP1CA-201ENST00000312989 ALDH16A1Q8IZ83 802 aa12.42□□□□□ -0.42
PPP1CA-201ENST00000312989 AQP11Q8NBQ7 271 aa12.42□□□□□ -0.42
PPP1CA-201ENST00000312989 ICA1LQ8NDH6 482 aa12.42□□□□□ -0.42
PPP1CA-201ENST00000312989 SDR9C7Q8NEX9 313 aa12.42□□□□□ -0.42
PPP1CA-201ENST00000312989 OR4Q3Q8NH05 313 aa12.42□□□□□ -0.42
PPP1CA-201ENST00000312989 CCDC124Q96CT7 223 aaKnown RBP12.42□□□□□ -0.42
PPP1CA-201ENST00000312989 IFT27Q9BW83 186 aa12.42□□□□□ -0.42
PPP1CA-201ENST00000312989 ATPIF1Q9UII2 106 aa12.42□□□□□ -0.42
PPP1CA-201ENST00000312989 TMCC3Q9ULS5 477 aa12.42□□□□□ -0.42
PPP1CA-201ENST00000312989 IDH3BO43837 385 aa12.41□□□□□ -0.42
PPP1CA-201ENST00000312989 RBMXP38159 391 aaKnown RBP12.41□□□□□ -0.42
PPP1CA-201ENST00000312989 IFNGR2P38484 337 aa12.41□□□□□ -0.42
PPP1CA-201ENST00000312989 HTR5AP47898 357 aa12.41□□□□□ -0.42
PPP1CA-201ENST00000312989 PSG7Q13046 419 aa12.41□□□□□ -0.42
PPP1CA-201ENST00000312989 ZNF718Q3SXZ3 478 aa12.41□□□□□ -0.42
PPP1CA-201ENST00000312989 CLEC12AQ5QGZ9 265 aa12.41□□□□□ -0.42
PPP1CA-201ENST00000312989 OR2T5Q6IEZ7 315 aa12.41□□□□□ -0.42
PPP1CA-201ENST00000312989 SLC18B1Q6NT16 456 aa12.41□□□□□ -0.42
PPP1CA-201ENST00000312989 CFAP77Q6ZQR2 320 aa12.41□□□□□ -0.42
PPP1CA-201ENST00000312989 Q6ZR03 302 aa12.41□□□□□ -0.42
PPP1CA-201ENST00000312989 TMEM179BQ7Z7N9 219 aa12.41□□□□□ -0.42
PPP1CA-201ENST00000312989 OR10S1Q8NGN2 331 aa12.41□□□□□ -0.42
PPP1CA-201ENST00000312989 OR2T29Q8NH02 315 aa12.41□□□□□ -0.42
PPP1CA-201ENST00000312989 OR1F12Q8NHA8 337 aa12.41□□□□□ -0.42
PPP1CA-201ENST00000312989 CLDND2Q8NHS1 167 aa12.41□□□□□ -0.42
PPP1CA-201ENST00000312989 BCAS4Q8TDM0 211 aa12.41□□□□□ -0.42
PPP1CA-201ENST00000312989 HPS1Q92902 700 aa12.41□□□□□ -0.42
PPP1CA-201ENST00000312989 MDFIQ99750 246 aa12.41□□□□□ -0.42
PPP1CA-201ENST00000312989 DGCR6LQ9BY27 220 aa12.41□□□□□ -0.42
PPP1CA-201ENST00000312989 RERGLQ9H628 205 aa12.41□□□□□ -0.42
PPP1CA-201ENST00000312989 RPRD1BQ9NQG5 326 aaKnown RBP12.41□□□□□ -0.42
PPP1CA-201ENST00000312989 PLEK2Q9NYT0 353 aa12.41□□□□□ -0.42
PPP1CA-201ENST00000312989 EIF3KQ9UBQ5 218 aaKnown RBP12.41□□□□□ -0.42
PPP1CA-201ENST00000312989 STARD10Q9Y365 291 aa12.41□□□□□ -0.42
PPP1CA-201ENST00000312989 CHD3Q12873 2000 aaKnown RBP12.41□□□□□ -0.42
PPP1CA-201ENST00000312989 MXRA5Q9NR99 2828 aa12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 CCNB2O95067 398 aa12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 KITLGP21583 273 aa12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 CRABP1P29762 137 aa12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 GUCA1AP43080 201 aaPredicted RBP12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 CRYBB2P43320 205 aa12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 CHN2P52757 468 aa12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 CDH15P55291 814 aa12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 LMO4P61968 165 aa12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 TRAP1Q12931 704 aaKnown RBP12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 MICAQ29983 383 aa12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 PCGF3Q3KNV8 242 aa12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 SLC35F1Q5T1Q4 408 aa12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 CORO6Q6QEF8 472 aa12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 LYPD4Q6UWN0 246 aa12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 COLCA1Q6ZS62 124 aa12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 C1orf174Q8IYL3 243 aa12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 LNX2Q8N448 690 aa12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 LINC00471Q8N535 108 aa12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 SLC37A3Q8NCC5 494 aa12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 OR52E2Q8NGJ4 325 aa12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 NIPSNAP1Q9BPW8 284 aa12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 THTPAQ9BU02 230 aa12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 RBM4Q9BWF3 364 aaKnown RBP12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 CHID1Q9BWS9 393 aa12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 NMNAT2Q9BZQ4 307 aa12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 SRA1Q9HD15 236 aaKnown RBP12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 CYB5R1Q9UHQ9 305 aa12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 U3KQV3 271 aa12.4□□□□□ -0.42
PPP1CA-201ENST00000312989 LOC100289279A0A1B0GTE1 492 aa12.39□□□□□ -0.43
PPP1CA-201ENST00000312989 AQP12BA6NM10 295 aa12.39□□□□□ -0.43
PPP1CA-201ENST00000312989 FAM157AC9JC47 383 aa12.39□□□□□ -0.43
PPP1CA-201ENST00000312989 LMX1BO60663 402 aa12.39□□□□□ -0.43
PPP1CA-201ENST00000312989 ABHD16AO95870 558 aa12.39□□□□□ -0.43
PPP1CA-201ENST00000312989 CD55P08174 381 aa12.39□□□□□ -0.43
PPP1CA-201ENST00000312989 RAP2AP10114 183 aa12.39□□□□□ -0.43
PPP1CA-201ENST00000312989 ZNF81P51508 661 aa12.39□□□□□ -0.43
PPP1CA-201ENST00000312989 TMEM33P57088 247 aa12.39□□□□□ -0.43
PPP1CA-201ENST00000312989 FAM209AQ5JX71 171 aa12.39□□□□□ -0.43
PPP1CA-201ENST00000312989 RPL13AP3Q6NVV1 102 aa12.39□□□□□ -0.43
PPP1CA-201ENST00000312989 DNM1P34Q6PK57 102 aa12.39□□□□□ -0.43
PPP1CA-201ENST00000312989 CD300LDQ6UXZ3 194 aa12.39□□□□□ -0.43
PPP1CA-201ENST00000312989 JAZF1Q86VZ6 243 aa12.39□□□□□ -0.43
PPP1CA-201ENST00000312989 AQP12AQ8IXF9 295 aa12.39□□□□□ -0.43
PPP1CA-201ENST00000312989 CYB561A3Q8NBI2 242 aa12.39□□□□□ -0.43
PPP1CA-201ENST00000312989 CANT1Q8WVQ1 401 aa12.39□□□□□ -0.43
PPP1CA-201ENST00000312989 MAP6Q96JE9 813 aa12.39□□□□□ -0.43
PPP1CA-201ENST00000312989 COQ7Q99807 217 aa12.39□□□□□ -0.43
PPP1CA-201ENST00000312989 ELOVL3Q9HB03 270 aa12.39□□□□□ -0.43
PPP1CA-201ENST00000312989 MSL2Q9HCI7 577 aa12.39□□□□□ -0.43
PPP1CA-201ENST00000312989 DCAF16Q9NXF7 216 aa12.39□□□□□ -0.43
PPP1CA-201ENST00000312989 SAMHD1Q9Y3Z3 626 aaKnown RBP12.39□□□□□ -0.43
PPP1CA-201ENST00000312989 SPRY3O43610 288 aa12.38□□□□□ -0.43
PPP1CA-201ENST00000312989 CDC14BO60729 498 aa12.38□□□□□ -0.43
PPP1CA-201ENST00000312989 DEAF1O75398 565 aaPredicted RBP12.38□□□□□ -0.43
PPP1CA-201ENST00000312989 SOX14O95416 240 aa12.38□□□□□ -0.43
PPP1CA-201ENST00000312989 RENP00797 406 aa12.38□□□□□ -0.43
PPP1CA-201ENST00000312989 NOS3P29474 1203 aa12.38□□□□□ -0.43
PPP1CA-201ENST00000312989 GCH1P30793 250 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms