RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 SMAD9O15198 467 aaKnown RBP18.93■□□□□ 0.62
SOX17-201ENST00000297316 MAPK3P27361 379 aaPredicted RBP18.93■□□□□ 0.62
SOX17-201ENST00000297316 CDAP32320 146 aa18.93■□□□□ 0.62
SOX17-201ENST00000297316 CCR9P51686 369 aa18.93■□□□□ 0.62
SOX17-201ENST00000297316 GFRA1P56159 465 aa18.93■□□□□ 0.62
SOX17-201ENST00000297316 CSNK2A1P68400 391 aaPredicted RBP18.93■□□□□ 0.62
SOX17-201ENST00000297316 IZUMO1Q8IYV9 350 aa18.93■□□□□ 0.62
SOX17-201ENST00000297316 MDS2Q8NDY4 140 aa18.93■□□□□ 0.62
SOX17-201ENST00000297316 OR6X1Q8NH79 312 aa18.93■□□□□ 0.62
SOX17-201ENST00000297316 RGS13O14921 159 aa18.92■□□□□ 0.62
SOX17-201ENST00000297316 CXCL13O43927 109 aa18.92■□□□□ 0.62
SOX17-201ENST00000297316 MAS1P04201 325 aa18.92■□□□□ 0.62
SOX17-201ENST00000297316 S100A1P23297 94 aa18.92■□□□□ 0.62
SOX17-201ENST00000297316 EIF1AXP47813 144 aaKnown RBP18.92■□□□□ 0.62
SOX17-201ENST00000297316 NDUFA5Q16718 116 aa18.92■□□□□ 0.62
SOX17-201ENST00000297316 IGF2-ASQ6U949 168 aa18.92■□□□□ 0.62
SOX17-201ENST00000297316 CREB3L2Q70SY1 520 aa18.92■□□□□ 0.62
SOX17-201ENST00000297316 ROBO4Q8WZ75 1007 aa18.92■□□□□ 0.62
SOX17-201ENST00000297316 MCHR2Q969V1 340 aa18.92■□□□□ 0.62
SOX17-201ENST00000297316 SLC25A38Q96DW6 304 aa18.92■□□□□ 0.62
SOX17-201ENST00000297316 ZNF552Q9H707 407 aaPredicted RBP18.92■□□□□ 0.62
SOX17-201ENST00000297316 LIN7BQ9HAP6 207 aa18.92■□□□□ 0.62
SOX17-201ENST00000297316 DDX28Q9NUL7 540 aaKnown RBP18.92■□□□□ 0.62
SOX17-201ENST00000297316 KLHL9Q9P2J3 617 aa18.92■□□□□ 0.62
SOX17-201ENST00000297316 PRRC2CQ9Y520 2896 aaKnown RBP18.92■□□□□ 0.62
SOX17-201ENST00000297316 LOC102725191A0A1B0GVB3 256 aa18.92■□□□□ 0.62
SOX17-201ENST00000297316 A0A1W2PPL8 197 aa18.92■□□□□ 0.62
SOX17-201ENST00000297316 OR5H15A6NDH6 313 aa18.92■□□□□ 0.62
SOX17-201ENST00000297316 A8MV72 311 aaPredicted RBP18.92■□□□□ 0.62
SOX17-201ENST00000297316 AQP8O94778 261 aa18.92■□□□□ 0.62
SOX17-201ENST00000297316 SP1P08047 785 aa18.92■□□□□ 0.62
SOX17-201ENST00000297316 POU3F2P20265 443 aaPredicted RBP18.92■□□□□ 0.62
SOX17-201ENST00000297316 MAP2K3P46734 347 aa18.92■□□□□ 0.62
SOX17-201ENST00000297316 CCL11P51671 97 aa18.92■□□□□ 0.62
SOX17-201ENST00000297316 LRFN4Q6PJG9 635 aa18.92■□□□□ 0.62
SOX17-201ENST00000297316 PLXDC2Q6UX71 529 aa18.92■□□□□ 0.62
SOX17-201ENST00000297316 CMTM4Q8IZR5 234 aa18.92■□□□□ 0.62
SOX17-201ENST00000297316 TSEN15Q8WW01 171 aaKnown RBP18.92■□□□□ 0.62
SOX17-201ENST00000297316 KCNE4Q8WWG9 221 aa18.92■□□□□ 0.62
SOX17-201ENST00000297316 ST6GAL2Q96JF0 529 aa18.92■□□□□ 0.62
SOX17-201ENST00000297316 EMC7Q9NPA0 242 aa18.92■□□□□ 0.62
SOX17-201ENST00000297316 EMC9Q9Y3B6 208 aa18.92■□□□□ 0.62
SOX17-201ENST00000297316 ZNF726A6NNF4 738 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 PROB1E7EW31 1015 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 EEF1E1O43324 174 aaKnown RBP18.91■□□□□ 0.62
SOX17-201ENST00000297316 EIF1BO60739 113 aaKnown RBP18.91■□□□□ 0.62
SOX17-201ENST00000297316 ZNF432O94892 652 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 HRGP04196 525 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 FAM157BP0CG42 384 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 CARD18P57730 90 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 RNASE12Q5GAN4 147 aaKnown RBP18.91■□□□□ 0.62
SOX17-201ENST00000297316 PHYHD1Q5SRE7 291 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 THEM4Q5T1C6 240 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 OR9K2Q8NGE7 335 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 OR10S1Q8NGN2 331 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 OR10D3Q8NH80 312 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 ZNF845Q96IR2 970 aaPredicted RBP18.91■□□□□ 0.62
SOX17-201ENST00000297316 ADGRG7Q96K78 797 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 THAP7Q9BT49 309 aaPredicted RBP18.91■□□□□ 0.62
SOX17-201ENST00000297316 HDHD2Q9H0R4 259 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 G6PC2Q9NQR9 355 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 NCOA6Q14686 2063 aaPredicted RBP18.91■□□□□ 0.62
SOX17-201ENST00000297316 MEIOCA2RUB1 952 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 GJE1A6NN92 205 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 LYRM1O43325 122 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 LAP3P28838 519 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 MEOX1P50221 254 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 RAC3P60763 192 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 PYHIN1Q6K0P9 492 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 FCRLAQ7L513 359 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 TMEM251Q8N6I4 163 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 ZIC4Q8N9L1 334 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 NAA11Q9BSU3 229 aaPredicted RBP18.91■□□□□ 0.62
SOX17-201ENST00000297316 SLC6A15Q9H2J7 730 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 SEC61A2Q9H9S3 476 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 CENPMQ9NSP4 180 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 OR5V1Q9UGF6 321 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 CYB5R1Q9UHQ9 305 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 MRPS7Q9Y2R9 242 aaKnown RBP18.91■□□□□ 0.62
SOX17-201ENST00000297316 MRPS18CQ9Y3D5 142 aaKnown RBP18.91■□□□□ 0.62
SOX17-201ENST00000297316 R4GMQ9 66 aa18.91■□□□□ 0.62
SOX17-201ENST00000297316 SPENQ96T58 3664 aaKnown RBP18.91■□□□□ 0.62
SOX17-201ENST00000297316 NPIPA2E9PIF3 369 aa18.9■□□□□ 0.62
SOX17-201ENST00000297316 NPIPA3F8WFD2 350 aa18.9■□□□□ 0.62
SOX17-201ENST00000297316 NME2P1O60361 137 aa18.9■□□□□ 0.62
SOX17-201ENST00000297316 ITGB2P05107 769 aa18.9■□□□□ 0.62
SOX17-201ENST00000297316 QDPRP09417 244 aa18.9■□□□□ 0.62
SOX17-201ENST00000297316 NME2P22392 152 aa18.9■□□□□ 0.62
SOX17-201ENST00000297316 AGFG1P52594 562 aaKnown RBP18.9■□□□□ 0.62
SOX17-201ENST00000297316 CLN3Q13286 438 aa18.9■□□□□ 0.62
SOX17-201ENST00000297316 ZNF57Q68EA5 555 aaPredicted RBP18.9■□□□□ 0.62
SOX17-201ENST00000297316 SLC25A25Q6KCM7 469 aa18.9■□□□□ 0.62
SOX17-201ENST00000297316 SLC25A47Q6Q0C1 308 aa18.9■□□□□ 0.62
SOX17-201ENST00000297316 ASB18Q6ZVZ8 466 aa18.9■□□□□ 0.62
SOX17-201ENST00000297316 SLITRK2Q9H156 845 aa18.9■□□□□ 0.62
SOX17-201ENST00000297316 A0A0B4J293 547 aa18.9■□□□□ 0.62
SOX17-201ENST00000297316 SELENOPP49908 381 aa18.9■□□□□ 0.62
SOX17-201ENST00000297316 RRADP55042 308 aa18.9■□□□□ 0.62
SOX17-201ENST00000297316 PLGLB1Q02325 96 aa18.9■□□□□ 0.62
SOX17-201ENST00000297316 UBE2NLQ5JXB2 153 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms