RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 CFAP77Q6ZQR2 320 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 RFPL4BQ6ZWI9 263 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 HIST2H3AQ71DI3 136 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 TGIF2LYQ8IUE0 185 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 ZCCHC24Q8N2G6 241 aaKnown RBP11.49□□□□□ -0.57
VPS28-201ENST00000292510 GJC3Q8NFK1 279 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 OR1J1Q8NGS3 322 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 OR6K6Q8NGW6 343 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 OR1F12Q8NHA8 337 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 ABHD4Q8TB40 342 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 Q96MF0 132 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 DOK1Q99704 481 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 CDADC1Q9BWV3 514 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 OR51V1Q9H2C8 321 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 HINT3Q9NQE9 182 aaKnown RBP11.49□□□□□ -0.57
VPS28-201ENST00000292510 TVP23BQ9NYZ1 205 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 CYB5R1Q9UHQ9 305 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 DUSP13Q9UII6 198 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 NDRG4Q9ULP0 352 aaKnown RBP11.49□□□□□ -0.57
VPS28-201ENST00000292510 COMMD3-BMI1R4GMX3 469 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 PMF1-BGLAPU3KQ54 211 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 ARFGEF3Q5TH69 2177 aa11.48□□□□□ -0.57
VPS28-201ENST00000292510 VSTM5A8MXK1 200 aa11.48□□□□□ -0.57
VPS28-201ENST00000292510 PRR23D1E9PI22 279 aaPredicted RBP11.48□□□□□ -0.57
VPS28-201ENST00000292510 H7C417 338 aa11.48□□□□□ -0.57
VPS28-201ENST00000292510 CLPTM1O96005 669 aa11.48□□□□□ -0.57
VPS28-201ENST00000292510 PRR23D2P0DMB1 279 aaPredicted RBP11.48□□□□□ -0.57
VPS28-201ENST00000292510 COX5BP10606 129 aa11.48□□□□□ -0.57
VPS28-201ENST00000292510 IGFBP5P24593 272 aa11.48□□□□□ -0.57
VPS28-201ENST00000292510 FMO3P31513 532 aa11.48□□□□□ -0.57
VPS28-201ENST00000292510 POLR2IP36954 125 aaKnown RBP11.48□□□□□ -0.57
VPS28-201ENST00000292510 RAD52P43351 418 aa11.48□□□□□ -0.57
VPS28-201ENST00000292510 ALDH3B1P43353 468 aa11.48□□□□□ -0.57
VPS28-201ENST00000292510 ESRRGP62508 458 aa11.48□□□□□ -0.57
VPS28-201ENST00000292510 GABPB1Q06547 395 aaPredicted RBP11.48□□□□□ -0.57
VPS28-201ENST00000292510 MAD2L1BPQ15013 274 aaPredicted RBP11.48□□□□□ -0.57
VPS28-201ENST00000292510 RAB35Q15286 201 aa11.48□□□□□ -0.57
VPS28-201ENST00000292510 SNAPC1Q16533 368 aa11.48□□□□□ -0.57
VPS28-201ENST00000292510 ZSCAN26Q16670 478 aa11.48□□□□□ -0.57
VPS28-201ENST00000292510 ALKBH6Q3KRA9 238 aa11.48□□□□□ -0.57
VPS28-201ENST00000292510 ELFN2Q5R3F8 820 aa11.48□□□□□ -0.57
VPS28-201ENST00000292510 CPOQ8IVL8 374 aa11.48□□□□□ -0.57
VPS28-201ENST00000292510 BBS1Q8NFJ9 593 aa11.48□□□□□ -0.57
VPS28-201ENST00000292510 OR2AJ1Q8NGZ0 328 aa11.48□□□□□ -0.57
VPS28-201ENST00000292510 SLC25A40Q8TBP6 338 aa11.48□□□□□ -0.57
VPS28-201ENST00000292510 PLEKHA8Q96JA3 519 aa11.48□□□□□ -0.57
VPS28-201ENST00000292510 MAP6Q96JE9 813 aa11.48□□□□□ -0.57
VPS28-201ENST00000292510 C4orf45Q96LM5 186 aa11.48□□□□□ -0.57
VPS28-201ENST00000292510 SORCS2Q96PQ0 1159 aa11.48□□□□□ -0.57
VPS28-201ENST00000292510 VRK1Q99986 396 aaPredicted RBP11.48□□□□□ -0.57
VPS28-201ENST00000292510 OSBPL10Q9BXB5 764 aa11.48□□□□□ -0.57
VPS28-201ENST00000292510 BCL2L14Q9BZR8 327 aa11.48□□□□□ -0.57
VPS28-201ENST00000292510 EIF3KQ9UBQ5 218 aaKnown RBP11.48□□□□□ -0.57
VPS28-201ENST00000292510 GRIP1Q9Y3R0 1128 aa11.48□□□□□ -0.57
VPS28-201ENST00000292510 TRIM64A6NGJ6 449 aa11.47□□□□□ -0.57
VPS28-201ENST00000292510 TRIM64BA6NI03 449 aa11.47□□□□□ -0.57
VPS28-201ENST00000292510 SSX4O60224 188 aa11.47□□□□□ -0.57
VPS28-201ENST00000292510 GLCEO94923 617 aa11.47□□□□□ -0.57
VPS28-201ENST00000292510 ABHD16AO95870 558 aa11.47□□□□□ -0.57
VPS28-201ENST00000292510 ADRA2AP08913 450 aa11.47□□□□□ -0.57
VPS28-201ENST00000292510 SPARCP09486 303 aa11.47□□□□□ -0.57
VPS28-201ENST00000292510 BMP4P12644 408 aa11.47□□□□□ -0.57
VPS28-201ENST00000292510 PAICSP22234 425 aaKnown RBP11.47□□□□□ -0.57
VPS28-201ENST00000292510 MPV17P39210 176 aa11.47□□□□□ -0.57
VPS28-201ENST00000292510 KLHL12Q53G59 568 aa11.47□□□□□ -0.57
VPS28-201ENST00000292510 TMEM255AQ5JRV8 349 aa11.47□□□□□ -0.57
VPS28-201ENST00000292510 PRSS57Q6UWY2 283 aa11.47□□□□□ -0.57
VPS28-201ENST00000292510 BCDIN3DQ7Z5W3 292 aaKnown RBP11.47□□□□□ -0.57
VPS28-201ENST00000292510 LURAP1LQ8IV03 231 aa11.47□□□□□ -0.57
VPS28-201ENST00000292510 C10orf67Q8IYJ2 551 aa11.47□□□□□ -0.57
VPS28-201ENST00000292510 OR10S1Q8NGN2 331 aa11.47□□□□□ -0.57
VPS28-201ENST00000292510 ZMYND19Q96E35 227 aaPredicted RBP11.47□□□□□ -0.57
VPS28-201ENST00000292510 PITX2Q99697 317 aa11.47□□□□□ -0.57
VPS28-201ENST00000292510 HDHD2Q9H0R4 259 aa11.47□□□□□ -0.57
VPS28-201ENST00000292510 TPK1Q9H3S4 243 aa11.47□□□□□ -0.57
VPS28-201ENST00000292510 POFUT1Q9H488 388 aa11.47□□□□□ -0.57
VPS28-201ENST00000292510 RIBC2Q9H4K1 309 aa11.47□□□□□ -0.57
VPS28-201ENST00000292510 DYNLRB1Q9NP97 96 aa11.47□□□□□ -0.57
VPS28-201ENST00000292510 PNRC2Q9NPJ4 139 aaKnown RBP11.47□□□□□ -0.57
VPS28-201ENST00000292510 A0A1W2PPW3 197 aa11.46□□□□□ -0.57
VPS28-201ENST00000292510 ZAR1LA6NP61 321 aa11.46□□□□□ -0.57
VPS28-201ENST00000292510 ZNF593O00488 134 aaPredicted RBP11.46□□□□□ -0.57
VPS28-201ENST00000292510 EI24O14681 340 aa11.46□□□□□ -0.57
VPS28-201ENST00000292510 PRKYO43930 277 aa11.46□□□□□ -0.57
VPS28-201ENST00000292510 ZNF250P15622 560 aa11.46□□□□□ -0.57
VPS28-201ENST00000292510 GSTT1P30711 240 aa11.46□□□□□ -0.57
VPS28-201ENST00000292510 ENTPD1P49961 510 aa11.46□□□□□ -0.57
VPS28-201ENST00000292510 PPOXP50336 477 aa11.46□□□□□ -0.57
VPS28-201ENST00000292510 NUDT6P53370 316 aa11.46□□□□□ -0.57
VPS28-201ENST00000292510 PPP1CBP62140 327 aa11.46□□□□□ -0.57
VPS28-201ENST00000292510 CLEC12BQ2HXU8 276 aa11.46□□□□□ -0.57
VPS28-201ENST00000292510 RSPO1Q2MKA7 263 aaPredicted RBP11.46□□□□□ -0.57
VPS28-201ENST00000292510 SLX4IPQ5VYV7 408 aa11.46□□□□□ -0.57
VPS28-201ENST00000292510 CXXC5Q7LFL8 322 aaKnown RBP11.46□□□□□ -0.57
VPS28-201ENST00000292510 DCXRQ7Z4W1 244 aa11.46□□□□□ -0.57
VPS28-201ENST00000292510 ERI1Q8IV48 349 aaKnown RBP11.46□□□□□ -0.57
VPS28-201ENST00000292510 ZNF525Q8N782 197 aa11.46□□□□□ -0.57
VPS28-201ENST00000292510 SYNPRQ8TBG9 265 aa11.46□□□□□ -0.57
VPS28-201ENST00000292510 MARS2Q96GW9 593 aaKnown RBP11.46□□□□□ -0.57
VPS28-201ENST00000292510 COQ7Q99807 217 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms