RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 LRRC61Q9BV99 259 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 NUDT9Q9BW91 350 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 OR11A1Q9GZK7 315 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 HHLA2Q9UM44 414 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 PLEKHA6Q9Y2H5 1048 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 PIAS3Q9Y6X2 628 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 RNF222A6NCQ9 220 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 EPOPA6NHQ4 379 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 FAM74A7A6NL05 159 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 FAM25EA8MYX2 175 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 TMEM150CB9EJG8 249 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 DISC1C4P0D8 188 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 OR2F2O95006 317 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 WDPCPO95876 746 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 MT-ATP6P00846 226 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 CNR1P21554 472 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 CAPZA1P52907 286 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 GFERP55789 205 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 MC2RQ01718 297 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 SRSF4Q08170 494 aaKnown RBP11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 OR2F1Q13607 317 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 CDNFQ49AH0 187 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 FAM74A3Q4VXF1 159 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 C9orf50Q5SZB4 431 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 LPCAT3Q6P1A2 487 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 CMBLQ96DG6 245 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 TBL1XR1Q9BZK7 514 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 DNTTIP1Q9H147 329 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 R4GMQ9 66 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 TMED7-TICAM2A0A0A6YYA0 188 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 IGHV5-51A0A0C4DH38 117 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 LOC101059948A0A1B0GTJ6 334 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 WIPF3A6NGB9 483 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 SRSF10O75494 262 aaKnown RBP11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 DDAH2O95865 285 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 SLC25A4P12235 298 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 PGCP20142 388 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 NR0B1P51843 470 aaKnown RBP11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 CXADRP78310 365 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 ZP2Q05996 745 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 PPP1R1AQ13522 171 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 ELOCQ15369 112 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 PRAMEF17Q5VTA0 474 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 C1orf140Q5VVS0 124 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 FJX1Q86VR8 437 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 TMEM17Q86X19 198 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 KDM8Q8N371 416 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 TMEM185AQ8NFB2 350 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 ZNF721Q8TF20 911 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 ZNF285Q96NJ3 590 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 TGM7Q96PF1 710 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 CST11Q9H112 138 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 TMED7Q9Y3B3 224 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 ARPC4-TTLL3A0A0A6YYG9 625 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 OR14I1A6ND48 311 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 DXOO77932 396 aaKnown RBP11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 IGKV3-11P04433 115 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 CD37P11049 281 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 HLA-DOBP13765 273 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 ZBTB25P24278 435 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 MRPS21P82921 87 aaKnown RBP11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 GLO1Q04760 184 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 ZNF169Q14929 603 aaPredicted RBP11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 SLC22A6Q4U2R8 563 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 RNASE10Q5GAN6 216 aaKnown RBP11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 LYG2Q86SG7 212 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 TRAPPC6BQ86SZ2 158 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 LINC00346Q8IVM7 164 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 GVQW1Q8N7I0 195 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 MRGPRFQ96AM1 343 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 CDCA3Q99618 268 aaPredicted RBP11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 G6PC2Q9NQR9 355 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 GDF2Q9UK05 429 aaPredicted RBP11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 OR52A1Q9UKL2 312 aa11.86□□□□□ -0.51
SLC28A1-201ENST00000286749 A0A0A6YYH2 397 aa11.85□□□□□ -0.51
SLC28A1-201ENST00000286749 MEGF11A6BM72 1044 aa11.85□□□□□ -0.51
SLC28A1-201ENST00000286749 A6NJ64 397 aa11.85□□□□□ -0.51
SLC28A1-201ENST00000286749 TMEM200CA6NKL6 621 aa11.85□□□□□ -0.51
SLC28A1-201ENST00000286749 H0YIG0 161 aa11.85□□□□□ -0.51
SLC28A1-201ENST00000286749 PLPP3O14495 311 aa11.85□□□□□ -0.51
SLC28A1-201ENST00000286749 DCNP07585 359 aaKnown RBP11.85□□□□□ -0.51
SLC28A1-201ENST00000286749 FMODQ06828 376 aa11.85□□□□□ -0.51
SLC28A1-201ENST00000286749 HYAL1Q12794 435 aa11.85□□□□□ -0.51
SLC28A1-201ENST00000286749 MEF2DQ14814 521 aa11.85□□□□□ -0.51
SLC28A1-201ENST00000286749 C1orf100Q5SVJ3 147 aa11.85□□□□□ -0.51
SLC28A1-201ENST00000286749 OR52W1Q6IF63 320 aa11.85□□□□□ -0.51
SLC28A1-201ENST00000286749 ACOT7LQ6ZUV0 252 aa11.85□□□□□ -0.51
SLC28A1-201ENST00000286749 TTLL10Q6ZVT0 673 aa11.85□□□□□ -0.51
SLC28A1-201ENST00000286749 RHOUQ7L0Q8 258 aa11.85□□□□□ -0.51
SLC28A1-201ENST00000286749 SLC25A42Q86VD7 318 aa11.85□□□□□ -0.51
SLC28A1-201ENST00000286749 C9orf40Q8IXQ3 194 aa11.85□□□□□ -0.51
SLC28A1-201ENST00000286749 PRRT1Q99946 306 aa11.85□□□□□ -0.51
SLC28A1-201ENST00000286749 ZNF416Q9BWM5 594 aa11.85□□□□□ -0.51
SLC28A1-201ENST00000286749 ZNF107Q9UII5 783 aaPredicted RBP11.85□□□□□ -0.51
SLC28A1-201ENST00000286749 CYP8B1Q9UNU6 501 aa11.85□□□□□ -0.51
SLC28A1-201ENST00000286749 COL5A1P20908 1838 aaPredicted RBP11.85□□□□□ -0.51
SLC28A1-201ENST00000286749 P2RY10O00398 339 aa11.85□□□□□ -0.51
SLC28A1-201ENST00000286749 NPIPB7O75200 414 aa11.85□□□□□ -0.51
SLC28A1-201ENST00000286749 GP1BAP07359 652 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms