RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 NUDT9Q9BW91 350 aa24.67■■□□□ 1.54
CBX4-201ENST00000269397 SCPEP1Q9HB40 452 aa24.67■■□□□ 1.54
CBX4-201ENST00000269397 SULT2B1O00204 365 aa24.66■■□□□ 1.54
CBX4-201ENST00000269397 FADS1O60427 444 aa24.66■■□□□ 1.54
CBX4-201ENST00000269397 IL33O95760 270 aa24.66■■□□□ 1.54
CBX4-201ENST00000269397 CD74P04233 296 aa24.66■■□□□ 1.54
CBX4-201ENST00000269397 SLC25A4P12235 298 aa24.66■■□□□ 1.54
CBX4-201ENST00000269397 IGFBP3P17936 291 aaPredicted RBP24.66■■□□□ 1.54
CBX4-201ENST00000269397 ZBTB25P24278 435 aa24.66■■□□□ 1.54
CBX4-201ENST00000269397 PRKXP51817 358 aa24.66■■□□□ 1.54
CBX4-201ENST00000269397 IL13RA1P78552 427 aa24.66■■□□□ 1.54
CBX4-201ENST00000269397 RNASE10Q5GAN6 216 aaKnown RBP24.66■■□□□ 1.54
CBX4-201ENST00000269397 ADAD2Q8NCV1 583 aaKnown RBP24.66■■□□□ 1.54
CBX4-201ENST00000269397 NUDCD2Q8WVJ2 157 aa24.66■■□□□ 1.54
CBX4-201ENST00000269397 ADAM19Q9H013 955 aa24.66■■□□□ 1.54
CBX4-201ENST00000269397 RP1P56715 2156 aa24.66■■□□□ 1.54
CBX4-201ENST00000269397 OR14I1A6ND48 311 aa24.66■■□□□ 1.54
CBX4-201ENST00000269397 ABCD4O14678 606 aa24.66■■□□□ 1.54
CBX4-201ENST00000269397 AKR1C4P17516 323 aa24.66■■□□□ 1.54
CBX4-201ENST00000269397 AKR1D1P51857 326 aa24.66■■□□□ 1.54
CBX4-201ENST00000269397 CCINQ13939 588 aa24.66■■□□□ 1.54
CBX4-201ENST00000269397 LYG2Q86SG7 212 aa24.66■■□□□ 1.54
CBX4-201ENST00000269397 ASB17Q8WXJ9 295 aa24.66■■□□□ 1.54
CBX4-201ENST00000269397 ZNF587Q96SQ5 575 aaPredicted RBP24.66■■□□□ 1.54
CBX4-201ENST00000269397 SIGLEC6O43699 453 aa24.65■■□□□ 1.54
CBX4-201ENST00000269397 RPL35P42766 123 aaKnown RBP24.65■■□□□ 1.54
CBX4-201ENST00000269397 RAB12Q6IQ22 244 aa24.65■■□□□ 1.54
CBX4-201ENST00000269397 TRAPPC6BQ86SZ2 158 aa24.65■■□□□ 1.54
CBX4-201ENST00000269397 CBLN2Q8IUK8 224 aa24.65■■□□□ 1.54
CBX4-201ENST00000269397 LINC00346Q8IVM7 164 aa24.65■■□□□ 1.54
CBX4-201ENST00000269397 THRSPQ92748 146 aa24.65■■□□□ 1.54
CBX4-201ENST00000269397 LHX6Q9UPM6 363 aa24.65■■□□□ 1.54
CBX4-201ENST00000269397 COA3Q9Y2R0 106 aaPredicted RBP24.65■■□□□ 1.54
CBX4-201ENST00000269397 ZNF175Q9Y473 711 aa24.65■■□□□ 1.54
CBX4-201ENST00000269397 IGLV1-36A0A0B4J1U3 117 aa24.65■■□□□ 1.54
CBX4-201ENST00000269397 FAM221BA6H8Z2 402 aa24.65■■□□□ 1.54
CBX4-201ENST00000269397 HSPB2A8KAH6 182 aa24.65■■□□□ 1.54
CBX4-201ENST00000269397 F12P00748 615 aaPredicted RBP24.65■■□□□ 1.54
CBX4-201ENST00000269397 ADCYAP1P18509 176 aa24.65■■□□□ 1.54
CBX4-201ENST00000269397 SLC37A1P57057 533 aa24.65■■□□□ 1.54
CBX4-201ENST00000269397 RPL27P61353 136 aaKnown RBP24.65■■□□□ 1.54
CBX4-201ENST00000269397 SRSF3P84103 164 aaKnown RBP24.65■■□□□ 1.54
CBX4-201ENST00000269397 HSPB2Q16082 182 aa24.65■■□□□ 1.54
CBX4-201ENST00000269397 KCTD18Q6PI47 426 aaPredicted RBP24.65■■□□□ 1.54
CBX4-201ENST00000269397 PTPMT1Q8WUK0 201 aaPredicted RBP24.65■■□□□ 1.54
CBX4-201ENST00000269397 C13orf42A0A1B0GVH6 325 aa24.64■■□□□ 1.54
CBX4-201ENST00000269397 LOC107986453A0A1B0GWG9 222 aa24.64■■□□□ 1.54
CBX4-201ENST00000269397 FLI1Q01543 452 aaPredicted RBP24.64■■□□□ 1.54
CBX4-201ENST00000269397 STK11Q15831 433 aa24.64■■□□□ 1.54
CBX4-201ENST00000269397 VWA2Q5GFL6 755 aa24.64■■□□□ 1.54
CBX4-201ENST00000269397 THAP6Q8TBB0 222 aa24.64■■□□□ 1.54
CBX4-201ENST00000269397 PAQR8Q8TEZ7 354 aa24.64■■□□□ 1.54
CBX4-201ENST00000269397 PIGMQ9H3S5 423 aa24.64■■□□□ 1.54
CBX4-201ENST00000269397 C9orf170A2RU37 121 aa24.64■■□□□ 1.53
CBX4-201ENST00000269397 INPP5JQ15735 1006 aaPredicted RBP24.64■■□□□ 1.53
CBX4-201ENST00000269397 SLC25A42Q86VD7 318 aa24.64■■□□□ 1.53
CBX4-201ENST00000269397 INO80EQ8NBZ0 244 aaPredicted RBP24.64■■□□□ 1.53
CBX4-201ENST00000269397 OR11A1Q9GZK7 315 aa24.64■■□□□ 1.53
CBX4-201ENST00000269397 MYOZ1Q9NP98 299 aaPredicted RBP24.64■■□□□ 1.53
CBX4-201ENST00000269397 ARID1AO14497 2285 aa24.63■■□□□ 1.53
CBX4-201ENST00000269397 AKT2P31751 481 aa24.63■■□□□ 1.53
CBX4-201ENST00000269397 CD96P40200 585 aa24.63■■□□□ 1.53
CBX4-201ENST00000269397 ROM1Q03395 351 aa24.63■■□□□ 1.53
CBX4-201ENST00000269397 TOMM20Q15388 145 aa24.63■■□□□ 1.53
CBX4-201ENST00000269397 LPCAT3Q6P1A2 487 aa24.63■■□□□ 1.53
CBX4-201ENST00000269397 LDLRAD3Q86YD5 345 aa24.63■■□□□ 1.53
CBX4-201ENST00000269397 TMEM218A2RU14 115 aa24.63■■□□□ 1.53
CBX4-201ENST00000269397 LDLRAD4O15165 306 aa24.63■■□□□ 1.53
CBX4-201ENST00000269397 PGAM2P15259 253 aa24.63■■□□□ 1.53
CBX4-201ENST00000269397 SHEQ5VZ18 495 aa24.63■■□□□ 1.53
CBX4-201ENST00000269397 SLCO5A1Q9H2Y9 848 aa24.63■■□□□ 1.53
CBX4-201ENST00000269397 TRAV36DV7A0A075B6V5 113 aa24.62■■□□□ 1.53
CBX4-201ENST00000269397 CPED1A4D0V7 1026 aa24.62■■□□□ 1.53
CBX4-201ENST00000269397 ERCC1P07992 297 aaPredicted RBP24.62■■□□□ 1.53
CBX4-201ENST00000269397 HLA-DOBP13765 273 aa24.62■■□□□ 1.53
CBX4-201ENST00000269397 HRH1P35367 487 aa24.62■■□□□ 1.53
CBX4-201ENST00000269397 ZP2Q05996 745 aa24.62■■□□□ 1.53
CBX4-201ENST00000269397 SRSF4Q08170 494 aaKnown RBP24.62■■□□□ 1.53
CBX4-201ENST00000269397 MAMDC2Q7Z304 686 aaPredicted RBP24.62■■□□□ 1.53
CBX4-201ENST00000269397 ZNF519Q8TB69 540 aa24.62■■□□□ 1.53
CBX4-201ENST00000269397 S1PR5Q9H228 398 aa24.62■■□□□ 1.53
CBX4-201ENST00000269397 GDF2Q9UK05 429 aaPredicted RBP24.62■■□□□ 1.53
CBX4-201ENST00000269397 HHLA2Q9UM44 414 aa24.62■■□□□ 1.53
CBX4-201ENST00000269397 KIR2DS5A0A0G2JLQ3 304 aa24.62■■□□□ 1.53
CBX4-201ENST00000269397 A0A0G2JNG1 304 aa24.62■■□□□ 1.53
CBX4-201ENST00000269397 C5orf51A6NDU8 294 aa24.62■■□□□ 1.53
CBX4-201ENST00000269397 OR6C76A6NM76 312 aa24.62■■□□□ 1.53
CBX4-201ENST00000269397 H7C2Y5 167 aa24.62■■□□□ 1.53
CBX4-201ENST00000269397 KIR2DS3K7RE56 304 aa24.62■■□□□ 1.53
CBX4-201ENST00000269397 P2RY10O00398 339 aa24.62■■□□□ 1.53
CBX4-201ENST00000269397 EIF1AYO14602 144 aaKnown RBP24.62■■□□□ 1.53
CBX4-201ENST00000269397 LINC01565O15544 149 aa24.62■■□□□ 1.53
CBX4-201ENST00000269397 STK17BO94768 372 aa24.62■■□□□ 1.53
CBX4-201ENST00000269397 NSA2O95478 260 aaKnown RBP24.62■■□□□ 1.53
CBX4-201ENST00000269397 KIR2DS5Q14953 304 aa24.62■■□□□ 1.53
CBX4-201ENST00000269397 TMEM71Q6P5X7 295 aa24.62■■□□□ 1.53
CBX4-201ENST00000269397 TMPPEQ6ZT21 453 aa24.62■■□□□ 1.53
CBX4-201ENST00000269397 TSLPQ969D9 159 aa24.62■■□□□ 1.53
CBX4-201ENST00000269397 TMEM231Q9H6L2 316 aa24.62■■□□□ 1.53
CBX4-201ENST00000269397 TTLL8A6PVC2 850 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms