RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 SGCGQ13326 291 aa8.4□□□□□ -1.06
SRSF6-201ENST00000244020 CSRP2Q16527 193 aa8.4□□□□□ -1.06
SRSF6-201ENST00000244020 OR51A4Q8NGJ6 313 aa8.4□□□□□ -1.06
SRSF6-201ENST00000244020 OR10AC1Q8NH08 325 aa8.4□□□□□ -1.06
SRSF6-201ENST00000244020 DUSP22Q9NRW4 184 aa8.4□□□□□ -1.06
SRSF6-201ENST00000244020 LUZP4Q9P127 313 aa8.4□□□□□ -1.06
SRSF6-201ENST00000244020 GRHPRQ9UBQ7 328 aa8.4□□□□□ -1.06
SRSF6-201ENST00000244020 ENTPD2Q9Y5L3 495 aa8.4□□□□□ -1.06
SRSF6-201ENST00000244020 PQLC2LA1A4F0 135 aa8.4□□□□□ -1.07
SRSF6-201ENST00000244020 LINC00587B1AMM8 73 aa8.4□□□□□ -1.07
SRSF6-201ENST00000244020 SPINT1O43278 529 aa8.4□□□□□ -1.07
SRSF6-201ENST00000244020 RNGTTO60942 597 aaKnown RBP8.4□□□□□ -1.07
SRSF6-201ENST00000244020 RAD51DO75771 328 aa8.4□□□□□ -1.07
SRSF6-201ENST00000244020 PMP2P02689 132 aa8.4□□□□□ -1.07
SRSF6-201ENST00000244020 F13BP05160 661 aa8.4□□□□□ -1.07
SRSF6-201ENST00000244020 CD1AP06126 327 aa8.4□□□□□ -1.07
SRSF6-201ENST00000244020 NGFRP08138 427 aa8.4□□□□□ -1.07
SRSF6-201ENST00000244020 WASP42768 502 aa8.4□□□□□ -1.07
SRSF6-201ENST00000244020 PTTG1IPP53801 180 aa8.4□□□□□ -1.07
SRSF6-201ENST00000244020 LPCAT3Q6P1A2 487 aa8.4□□□□□ -1.07
SRSF6-201ENST00000244020 NPEPL1Q8NDH3 523 aa8.4□□□□□ -1.07
SRSF6-201ENST00000244020 TBC1D3DA0A087WVF3 549 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 TBC1D3IA0A087WXS9 549 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 LOC100289279A0A1B0GTE1 492 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 OR2W5A6NFC9 320 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 TBC1D3LB9A6J9 549 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 OR2T1O43869 369 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 ADAM11O75078 769 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 DFFBO76075 338 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 STK17BO94768 372 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 WNT11O96014 354 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 IFNA1P01562 189 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 TBC1D3HP0C7X1 549 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 PTAFRP25105 342 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 NPBWR1P48145 328 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 EMDP50402 254 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 RASGEF1BQ0VAM2 473 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 SMAD4Q13485 552 aaKnown RBP8.39□□□□□ -1.07
SRSF6-201ENST00000244020 HNRNPA1L2Q32P51 320 aaKnown RBP8.39□□□□□ -1.07
SRSF6-201ENST00000244020 ITPRIPL2Q3MIP1 535 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 Q5PR19 223 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 OTPQ5XKR4 325 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 OR2T2Q6IF00 324 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 TBC1D3CQ6IPX1 549 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 GTF2H5Q6ZYL4 71 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 TBC1D3Q8IZP1 549 aaPredicted RBP8.39□□□□□ -1.07
SRSF6-201ENST00000244020 OR4K17Q8NGC6 315 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 ZNF596Q8TC21 504 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 FGF13Q92913 245 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 NXPE3Q969Y0 559 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 MENTQ9BUN1 341 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 SFXN1Q9H9B4 322 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 FAM96BQ9Y3D0 163 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 COLEC10Q9Y6Z7 277 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 FITM1A5D6W6 292 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 OR6C76A6NM76 312 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 AK1P00568 194 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 CSTAP01040 98 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 SDHAP31040 664 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 FXYD4P59646 89 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 MRPS34P82930 218 aaKnown RBP8.39□□□□□ -1.07
SRSF6-201ENST00000244020 COL19A1Q14993 1142 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 INPP5JQ15735 1006 aaPredicted RBP8.39□□□□□ -1.07
SRSF6-201ENST00000244020 EXOSC6Q5RKV6 272 aaKnown RBP8.39□□□□□ -1.07
SRSF6-201ENST00000244020 ADAMTSL4Q6UY14 1074 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 DBX2Q6ZNG2 339 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 ZAR1Q86SH2 424 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 GALNT16Q8N428 558 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 GATSQ8NAP1 163 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 WFIKKN2Q8TEU8 576 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 RERGQ96A58 199 aaPredicted RBP8.39□□□□□ -1.07
SRSF6-201ENST00000244020 LRFN5Q96NI6 719 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 SRMSQ9H3Y6 488 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.39□□□□□ -1.07
SRSF6-201ENST00000244020 MSRAQ9UJ68 235 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 HCFC2Q9Y5Z7 792 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 TMEM212A6NML5 194 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 ADH1CP00326 375 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 P2RY2P41231 377 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 PTGFRP43088 359 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 PRPS1P60891 318 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 RPS15AP62244 130 aaKnown RBP8.39□□□□□ -1.07
SRSF6-201ENST00000244020 GGTLC2Q14390 218 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 ZNF345Q14585 488 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 ZNF239Q16600 458 aaKnown RBP8.39□□□□□ -1.07
SRSF6-201ENST00000244020 LY6G6FQ5SQ64 297 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 NKAIN2Q5VXU1 208 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 KIRREL2Q6UWL6 708 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 SLC39A5Q6ZMH5 540 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 PLPP5Q8NEB5 264 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 OR4S1Q8NGB4 309 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 OR2G2Q8NGZ5 317 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 THRSPQ92748 146 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 FOXN4Q96NZ1 517 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 SERINC2Q96SA4 455 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 ELOVL1Q9BW60 279 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 ALX4Q9H161 411 aaPredicted RBP8.39□□□□□ -1.07
SRSF6-201ENST00000244020 SLCO5A1Q9H2Y9 848 aa8.39□□□□□ -1.07
SRSF6-201ENST00000244020 VSX1Q9NZR4 365 aaPredicted RBP8.39□□□□□ -1.07
SRSF6-201ENST00000244020 MRM2Q9UI43 246 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms