RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 SMARCD3Q6STE5 483 aa15.1■□□□□ 0.01
PNKP-230ENST00000638016 DPY19L2P2Q6ZN68 376 aa15.1■□□□□ 0.01
PNKP-230ENST00000638016 VASH1Q7L8A9 365 aaPredicted RBP15.1■□□□□ 0.01
PNKP-230ENST00000638016 ZDHHC21Q8IVQ6 265 aa15.1■□□□□ 0.01
PNKP-230ENST00000638016 ERMAPQ96PL5 475 aaPredicted RBP15.1■□□□□ 0.01
PNKP-230ENST00000638016 OR52D1Q9H346 318 aa15.1■□□□□ 0.01
PNKP-230ENST00000638016 FN3KQ9H479 309 aa15.1■□□□□ 0.01
PNKP-230ENST00000638016 SLCO1C1Q9NYB5 712 aa15.1■□□□□ 0.01
PNKP-230ENST00000638016 TREM2Q9NZC2 230 aa15.1■□□□□ 0.01
PNKP-230ENST00000638016 ASH2LQ9UBL3 628 aa15.1■□□□□ 0.01
PNKP-230ENST00000638016 EIF3KQ9UBQ5 218 aaKnown RBP15.1■□□□□ 0.01
PNKP-230ENST00000638016 B2RBV5 119 aa15.09■□□□□ 0.01
PNKP-230ENST00000638016 FAM157AC9JC47 383 aa15.09■□□□□ 0.01
PNKP-230ENST00000638016 PPIHO43447 177 aaKnown RBP15.09■□□□□ 0.01
PNKP-230ENST00000638016 KHDRBS3O75525 346 aaKnown RBP15.09■□□□□ 0.01
PNKP-230ENST00000638016 TXNDC12O95881 172 aa15.09■□□□□ 0.01
PNKP-230ENST00000638016 IGHV1-46P01743 117 aa15.09■□□□□ 0.01
PNKP-230ENST00000638016 DBHP09172 617 aa15.09■□□□□ 0.01
PNKP-230ENST00000638016 ITGA2P17301 1181 aa15.09■□□□□ 0.01
PNKP-230ENST00000638016 ERFP50548 548 aa15.09■□□□□ 0.01
PNKP-230ENST00000638016 SELENOVP59797 346 aa15.09■□□□□ 0.01
PNKP-230ENST00000638016 PCBD1P61457 104 aa15.09■□□□□ 0.01
PNKP-230ENST00000638016 PPP1R8Q12972 351 aaKnown RBP15.09■□□□□ 0.01
PNKP-230ENST00000638016 CR1LQ2VPA4 569 aa15.09■□□□□ 0.01
PNKP-230ENST00000638016 ZNF718Q3SXZ3 478 aa15.09■□□□□ 0.01
PNKP-230ENST00000638016 GPR139Q6DWJ6 353 aa15.09■□□□□ 0.01
PNKP-230ENST00000638016 RINLQ6ZS11 566 aa15.09■□□□□ 0.01
PNKP-230ENST00000638016 USP51Q70EK9 711 aa15.09■□□□□ 0.01
PNKP-230ENST00000638016 ALDH16A1Q8IZ83 802 aa15.09■□□□□ 0.01
PNKP-230ENST00000638016 OR9Q2Q8NGE9 314 aa15.09■□□□□ 0.01
PNKP-230ENST00000638016 MCUR1Q96AQ8 359 aa15.09■□□□□ 0.01
PNKP-230ENST00000638016 C4orf45Q96LM5 186 aa15.09■□□□□ 0.01
PNKP-230ENST00000638016 SAMD8Q96LT4 415 aa15.09■□□□□ 0.01
PNKP-230ENST00000638016 NMNAT3Q96T66 252 aa15.09■□□□□ 0.01
PNKP-230ENST00000638016 NDEL1Q9GZM8 345 aa15.09■□□□□ 0.01
PNKP-230ENST00000638016 RACGAP1Q9H0H5 632 aa15.09■□□□□ 0.01
PNKP-230ENST00000638016 LPAR2Q9HBW0 351 aa15.09■□□□□ 0.01
PNKP-230ENST00000638016 IL1RAPQ9NPH3 570 aa15.09■□□□□ 0.01
PNKP-230ENST00000638016 TCRBV5S2A0A599 114 aa15.08■□□□□ 0
PNKP-230ENST00000638016 RER1O15258 196 aa15.08■□□□□ 0
PNKP-230ENST00000638016 SGCEO43556 437 aa15.08■□□□□ 0
PNKP-230ENST00000638016 ABHD16AO95870 558 aa15.08■□□□□ 0
PNKP-230ENST00000638016 FPR3P25089 353 aa15.08■□□□□ 0
PNKP-230ENST00000638016 GCH1P30793 250 aa15.08■□□□□ 0
PNKP-230ENST00000638016 CENPAP49450 140 aa15.08■□□□□ 0
PNKP-230ENST00000638016 ZNF81P51508 661 aa15.08■□□□□ 0
PNKP-230ENST00000638016 RPS6KA3P51812 740 aa15.08■□□□□ 0
PNKP-230ENST00000638016 CDH15P55291 814 aa15.08■□□□□ 0
PNKP-230ENST00000638016 SCRN3Q0VDG4 424 aa15.08■□□□□ 0
PNKP-230ENST00000638016 CCDC92Q53HC0 331 aaPredicted RBP15.08■□□□□ 0
PNKP-230ENST00000638016 MBNL2Q5VZF2 373 aaKnown RBP15.08■□□□□ 0
PNKP-230ENST00000638016 C1orf94Q6P1W5 598 aa15.08■□□□□ 0
PNKP-230ENST00000638016 PGBD2Q6P3X8 592 aa15.08■□□□□ 0
PNKP-230ENST00000638016 LEG1Q6P5S2 330 aa15.08■□□□□ 0
PNKP-230ENST00000638016 CORO6Q6QEF8 472 aa15.08■□□□□ 0
PNKP-230ENST00000638016 CXXC5Q7LFL8 322 aaKnown RBP15.08■□□□□ 0
PNKP-230ENST00000638016 OR4K13Q8NH42 304 aa15.08■□□□□ 0
PNKP-230ENST00000638016 EGLN3Q9H6Z9 239 aa15.08■□□□□ 0
PNKP-230ENST00000638016 MSL2Q9HCI7 577 aa15.08■□□□□ 0
PNKP-230ENST00000638016 KRCC1Q9NPI7 259 aaPredicted RBP15.08■□□□□ 0
PNKP-230ENST00000638016 VNN3Q9NY84 501 aa15.08■□□□□ 0
PNKP-230ENST00000638016 PLEK2Q9NYT0 353 aa15.08■□□□□ 0
PNKP-230ENST00000638016 IGLV1-36A0A0B4J1U3 117 aa15.07■□□□□ 0
PNKP-230ENST00000638016 TPD52L2O43399 206 aaKnown RBP15.07■□□□□ 0
PNKP-230ENST00000638016 T-ENOLP0DO92 83 aa15.07■□□□□ 0
PNKP-230ENST00000638016 GAAP10253 952 aa15.07■□□□□ 0
PNKP-230ENST00000638016 HIST1H1CP16403 213 aaKnown RBP15.07■□□□□ 0
PNKP-230ENST00000638016 GSSP48637 474 aa15.07■□□□□ 0
PNKP-230ENST00000638016 MS4A2Q01362 244 aa15.07■□□□□ 0
PNKP-230ENST00000638016 MVKQ03426 396 aa15.07■□□□□ 0
PNKP-230ENST00000638016 AQP6Q13520 282 aa15.07■□□□□ 0
PNKP-230ENST00000638016 RFX4Q33E94 735 aa15.07■□□□□ 0
PNKP-230ENST00000638016 ZNF771Q7L3S4 317 aaPredicted RBP15.07■□□□□ 0
PNKP-230ENST00000638016 SYT9Q86SS6 491 aa15.07■□□□□ 0
PNKP-230ENST00000638016 ADCK1Q86TW2 530 aa15.07■□□□□ 0
PNKP-230ENST00000638016 GLB1L2Q8IW92 636 aa15.07■□□□□ 0
PNKP-230ENST00000638016 OR6V1Q8N148 313 aa15.07■□□□□ 0
PNKP-230ENST00000638016 LINC01356Q8N9X3 169 aa15.07■□□□□ 0
PNKP-230ENST00000638016 SDR9C7Q8NEX9 313 aa15.07■□□□□ 0
PNKP-230ENST00000638016 HPS1Q92902 700 aa15.07■□□□□ 0
PNKP-230ENST00000638016 BTBD10Q9BSF8 475 aa15.07■□□□□ 0
PNKP-230ENST00000638016 IFT27Q9BW83 186 aa15.07■□□□□ 0
PNKP-230ENST00000638016 SRA1Q9HD15 236 aaKnown RBP15.07■□□□□ 0
PNKP-230ENST00000638016 DCAF16Q9NXF7 216 aa15.07■□□□□ 0
PNKP-230ENST00000638016 GPR160Q9UJ42 338 aa15.07■□□□□ 0
PNKP-230ENST00000638016 NDRG4Q9ULP0 352 aaKnown RBP15.07■□□□□ 0
PNKP-230ENST00000638016 GRIP1Q9Y3R0 1128 aa15.07■□□□□ 0
PNKP-230ENST00000638016 LYVE1Q9Y5Y7 322 aa15.07■□□□□ 0
PNKP-230ENST00000638016 TANC2Q9HCD6 1990 aa15.07■□□□□ 0
PNKP-230ENST00000638016 ARHGAP32A7KAX9 2087 aa15.07■□□□□ 0
PNKP-230ENST00000638016 MXRA5Q9NR99 2828 aa15.07■□□□□ 0
PNKP-230ENST00000638016 IGHV1-69-2A0A0G2JMI3 117 aa15.06■□□□□ 0
PNKP-230ENST00000638016 AHCYL1O43865 530 aa15.06■□□□□ 0
PNKP-230ENST00000638016 ICMTO60725 284 aa15.06■□□□□ 0
PNKP-230ENST00000638016 SLC6A6P31641 620 aa15.06■□□□□ 0
PNKP-230ENST00000638016 SMIM11AP58511 58 aa15.06■□□□□ 0
PNKP-230ENST00000638016 PSG7Q13046 419 aa15.06■□□□□ 0
PNKP-230ENST00000638016 CLEC12AQ5QGZ9 265 aa15.06■□□□□ 0
PNKP-230ENST00000638016 SLC35F1Q5T1Q4 408 aa15.06■□□□□ 0
PNKP-230ENST00000638016 ZNF620Q6ZNG0 422 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms