RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 RNASE11Q8TAA1 199 aaKnown RBP5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZPLD1Q8TCW7 415 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 CCDC120Q96HB5 630 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 ARL5BQ96KC2 179 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 TMEM59Q9BXS4 323 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 TAS2R5Q9NYW4 299 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 TRAV8-7A0A075B6U6 113 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 TRBV11-1A0A0K0K1C0 115 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 F5H5P2 479 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 TNFRSF10AO00220 468 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZNF254O75437 659 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 CD34P28906 385 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 BDKRB2P30411 391 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 CLRN1P58418 232 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 FMODQ06828 376 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 NR2C2APQ86WQ0 139 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 ANGPTL5Q86XS5 388 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 OR1N1Q8NGS0 311 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 TTC9Q92623 222 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 TOMM40LQ969M1 308 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 NECAB3Q96P71 396 aaPredicted RBP5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 C20orf85Q9H1P6 137 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 CHD7Q9P2D1 2997 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 EPOPA6NHQ4 379 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 PIN1P1O15428 100 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 SNAPC5O75971 98 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 LCATP04180 440 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 ADRB1P08588 477 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 CSNK1A1P48729 337 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 DUSP3P51452 185 aaPredicted RBP5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 FOXL2P58012 376 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 EFNB1P98172 346 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 MGAT2Q10469 447 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 AIMP2Q13155 320 aaKnown RBP5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 LYSMD4Q5XG99 296 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 AWAT2Q6E213 333 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 MAMSTRQ6ZN01 415 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 OR2AK2Q8NG84 335 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 OR13C3Q8NGS6 347 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 OR1L3Q8NH93 324 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 GLTPQ9NZD2 209 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 STEAP1Q9UHE8 339 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 KCNIP3Q9Y2W7 256 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 HTTP42858 3142 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 IGHV1OR15-9A0A0B4J2B8 117 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 SIGLEC6O43699 453 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 AMY2BP19961 511 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 P2RX3P56373 397 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 NXPH1P58417 271 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 SEC61A1P61619 476 aaKnown RBP5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 MFAP5Q13361 173 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 ETFDHQ16134 617 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 PLA1AQ53H76 456 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 DMRTC1Q5HYR2 192 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZBTB37Q5TC79 503 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 SHISA5Q8N114 240 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZNF485Q8NCK3 441 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 OR4C16Q8NGL9 310 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 SLC25A43Q8WUT9 341 aaPredicted RBP5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 HOXB13Q92826 284 aaPredicted RBP5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 FOXRED1Q96CU9 486 aaPredicted RBP5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 MBD2Q9UBB5 411 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 LOC100289279A0A1B0GTE1 492 aa5.09□□□□□ -1.6
SYNCRIP-204ENST00000616122 A0A1B0GUH1 482 aa5.09□□□□□ -1.6
SYNCRIP-204ENST00000616122 TMEM127O75204 238 aa5.09□□□□□ -1.6
SYNCRIP-204ENST00000616122 ZNF780AO75290 641 aaPredicted RBP5.09□□□□□ -1.6
SYNCRIP-204ENST00000616122 SCGNO76038 276 aa5.09□□□□□ -1.6
SYNCRIP-204ENST00000616122 KNG1P01042 644 aa5.09□□□□□ -1.6
SYNCRIP-204ENST00000616122 HLA-DQB1P01920 261 aa5.09□□□□□ -1.6
SYNCRIP-204ENST00000616122 FOLR1P15328 257 aa5.09□□□□□ -1.6
SYNCRIP-204ENST00000616122 POU3F3P20264 500 aaPredicted RBP5.09□□□□□ -1.6
SYNCRIP-204ENST00000616122 RAB3AP20336 220 aa5.09□□□□□ -1.6
SYNCRIP-204ENST00000616122 CCNOP22674 350 aa5.09□□□□□ -1.6
SYNCRIP-204ENST00000616122 RNF4P78317 190 aa5.09□□□□□ -1.6
SYNCRIP-204ENST00000616122 CLVS2Q5SYC1 327 aa5.09□□□□□ -1.6
SYNCRIP-204ENST00000616122 ANKRD16Q6P6B7 361 aa5.09□□□□□ -1.6
SYNCRIP-204ENST00000616122 DEGS2Q6QHC5 323 aa5.09□□□□□ -1.6
SYNCRIP-204ENST00000616122 RFLNBQ8N5W9 214 aa5.09□□□□□ -1.6
SYNCRIP-204ENST00000616122 TAAR8Q969N4 342 aa5.09□□□□□ -1.6
SYNCRIP-204ENST00000616122 MED30Q96HR3 178 aa5.09□□□□□ -1.6
SYNCRIP-204ENST00000616122 PGLYRP3Q96LB9 341 aa5.09□□□□□ -1.6
SYNCRIP-204ENST00000616122 WDR77Q9BQA1 342 aaPredicted RBP5.09□□□□□ -1.6
SYNCRIP-204ENST00000616122 CHRDQ9H2X0 955 aa5.09□□□□□ -1.6
SYNCRIP-204ENST00000616122 ZNF160Q9HCG1 818 aa5.09□□□□□ -1.6
SYNCRIP-204ENST00000616122 FRG2CA6NGY1 282 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 LAMTOR5O43504 91 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 ICMTO60725 284 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 CRTAPO75718 401 aaPredicted RBP5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 SFTPBP07988 381 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 ACHEP22303 614 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 CBX5P45973 191 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 ZNF84P51523 738 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 MAP2K6P52564 334 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 CYCSP99999 105 aaKnown RBP5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 HSF1Q00613 529 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 INSM1Q01101 510 aaPredicted RBP5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 RIN1Q13671 783 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 MEF2DQ14814 521 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 UBE2NLQ5JXB2 153 aa5.08□□□□□ -1.6
SYNCRIP-204ENST00000616122 LINC01590Q5TEZ4 76 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms