RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 ANKDD1AQ495B1 522 aa17.83■□□□□ 0.44
PNKP-212ENST00000599454 CALHM3Q86XJ0 350 aa17.83■□□□□ 0.44
PNKP-212ENST00000599454 OR8J3Q8NGG0 315 aa17.83■□□□□ 0.44
PNKP-212ENST00000599454 BPIFA2Q96DR5 249 aa17.83■□□□□ 0.44
PNKP-212ENST00000599454 ATP6V1G3Q96LB4 118 aa17.83■□□□□ 0.44
PNKP-212ENST00000599454 COG8Q96MW5 612 aa17.83■□□□□ 0.44
PNKP-212ENST00000599454 ECSITQ9BQ95 431 aa17.83■□□□□ 0.44
PNKP-212ENST00000599454 SIKE1Q9BRV8 207 aa17.83■□□□□ 0.44
PNKP-212ENST00000599454 DCAF16Q9NXF7 216 aa17.83■□□□□ 0.44
PNKP-212ENST00000599454 A0A1W2PPL8 197 aa17.82■□□□□ 0.44
PNKP-212ENST00000599454 F5H0A9 414 aaPredicted RBP17.82■□□□□ 0.44
PNKP-212ENST00000599454 SHOX2O60902 331 aaPredicted RBP17.82■□□□□ 0.44
PNKP-212ENST00000599454 RNASE1P07998 156 aaKnown RBP17.82■□□□□ 0.44
PNKP-212ENST00000599454 IFI30P13284 250 aa17.82■□□□□ 0.44
PNKP-212ENST00000599454 CTXN1P60606 82 aa17.82■□□□□ 0.44
PNKP-212ENST00000599454 IL13RA1P78552 427 aa17.82■□□□□ 0.44
PNKP-212ENST00000599454 BAMBIQ13145 260 aa17.82■□□□□ 0.44
PNKP-212ENST00000599454 KLF17Q5JT82 389 aaPredicted RBP17.82■□□□□ 0.44
PNKP-212ENST00000599454 METTL21CQ5VZV1 264 aa17.82■□□□□ 0.44
PNKP-212ENST00000599454 MUC20Q8N307 709 aaPredicted RBP17.82■□□□□ 0.44
PNKP-212ENST00000599454 OR2Z1Q8NG97 314 aa17.82■□□□□ 0.44
PNKP-212ENST00000599454 SLC25A28Q96A46 364 aa17.82■□□□□ 0.44
PNKP-212ENST00000599454 THOC1Q96FV9 657 aaKnown RBP17.82■□□□□ 0.44
PNKP-212ENST00000599454 POLE4Q9NR33 117 aa17.82■□□□□ 0.44
PNKP-212ENST00000599454 OR5V1Q9UGF6 321 aa17.82■□□□□ 0.44
PNKP-212ENST00000599454 IL19Q9UHD0 177 aa17.82■□□□□ 0.44
PNKP-212ENST00000599454 POM121CA8CG34 1229 aa17.81■□□□□ 0.44
PNKP-212ENST00000599454 IFNL4K9M1U5 179 aa17.81■□□□□ 0.44
PNKP-212ENST00000599454 PIP5K1CO60331 668 aa17.81■□□□□ 0.44
PNKP-212ENST00000599454 MDH2P40926 338 aaKnown RBP17.81■□□□□ 0.44
PNKP-212ENST00000599454 OR1E2P47887 323 aa17.81■□□□□ 0.44
PNKP-212ENST00000599454 SCRN3Q0VDG4 424 aa17.81■□□□□ 0.44
PNKP-212ENST00000599454 ESCO2Q56NI9 601 aa17.81■□□□□ 0.44
PNKP-212ENST00000599454 RABL3Q5HYI8 236 aa17.81■□□□□ 0.44
PNKP-212ENST00000599454 CLDN22Q8N7P3 220 aa17.81■□□□□ 0.44
PNKP-212ENST00000599454 LRRC75AQ8NAA5 344 aa17.81■□□□□ 0.44
PNKP-212ENST00000599454 PRRC1Q96M27 445 aa17.81■□□□□ 0.44
PNKP-212ENST00000599454 C1orf147Q96MC9 270 aaPredicted RBP17.81■□□□□ 0.44
PNKP-212ENST00000599454 SIGLEC11Q96RL6 698 aa17.81■□□□□ 0.44
PNKP-212ENST00000599454 UNKLQ9H9P5 680 aaKnown RBP17.81■□□□□ 0.44
PNKP-212ENST00000599454 IL20RAQ9UHF4 553 aa17.81■□□□□ 0.44
PNKP-212ENST00000599454 PPP1R3CQ9UQK1 317 aa17.81■□□□□ 0.44
PNKP-212ENST00000599454 LRCH1Q9Y2L9 728 aa17.81■□□□□ 0.44
PNKP-212ENST00000599454 FBP2O00757 339 aa17.8■□□□□ 0.44
PNKP-212ENST00000599454 NPPAP01160 153 aa17.8■□□□□ 0.44
PNKP-212ENST00000599454 PPIAL4GP0DN37 164 aa17.8■□□□□ 0.44
PNKP-212ENST00000599454 MTNR1AP48039 350 aa17.8■□□□□ 0.44
PNKP-212ENST00000599454 ZMYND11Q15326 602 aa17.8■□□□□ 0.44
PNKP-212ENST00000599454 COQ5Q5HYK3 327 aa17.8■□□□□ 0.44
PNKP-212ENST00000599454 BCL6BQ8N143 479 aaPredicted RBP17.8■□□□□ 0.44
PNKP-212ENST00000599454 MAGEB18Q96M61 343 aa17.8■□□□□ 0.44
PNKP-212ENST00000599454 DUX5Q96PT3 197 aa17.8■□□□□ 0.44
PNKP-212ENST00000599454 MS4A7Q9GZW8 240 aaPredicted RBP17.8■□□□□ 0.44
PNKP-212ENST00000599454 MRGBPQ9NV56 204 aa17.8■□□□□ 0.44
PNKP-212ENST00000599454 INTS9Q9NV88 658 aaKnown RBP17.8■□□□□ 0.44
PNKP-212ENST00000599454 AHCYL1O43865 530 aa17.79■□□□□ 0.44
PNKP-212ENST00000599454 DOK2O60496 412 aa17.79■□□□□ 0.44
PNKP-212ENST00000599454 HTR5AP47898 357 aa17.79■□□□□ 0.44
PNKP-212ENST00000599454 SLC9A3P48764 834 aa17.79■□□□□ 0.44
PNKP-212ENST00000599454 SEC61A1P61619 476 aaKnown RBP17.79■□□□□ 0.44
PNKP-212ENST00000599454 PAX8Q06710 450 aa17.79■□□□□ 0.44
PNKP-212ENST00000599454 CYBRD1Q53TN4 286 aa17.79■□□□□ 0.44
PNKP-212ENST00000599454 Q6ZR03 302 aa17.79■□□□□ 0.44
PNKP-212ENST00000599454 C9orf139Q6ZV77 190 aa17.79■□□□□ 0.44
PNKP-212ENST00000599454 IGFN1Q86VF2 1251 aa17.79■□□□□ 0.44
PNKP-212ENST00000599454 ITLN1Q8WWA0 313 aa17.79■□□□□ 0.44
PNKP-212ENST00000599454 HAVCR1Q96D42 359 aa17.79■□□□□ 0.44
PNKP-212ENST00000599454 ZNF48Q96MX3 618 aaPredicted RBP17.79■□□□□ 0.44
PNKP-212ENST00000599454 C1QTNF5Q9BXJ0 243 aa17.79■□□□□ 0.44
PNKP-212ENST00000599454 SLITRK2Q9H156 845 aa17.79■□□□□ 0.44
PNKP-212ENST00000599454 A4GNTQ9UNA3 340 aa17.79■□□□□ 0.44
PNKP-212ENST00000599454 TRRAPQ9Y4A5 3859 aa17.78■□□□□ 0.44
PNKP-212ENST00000599454 J3QW42 95 aa17.78■□□□□ 0.44
PNKP-212ENST00000599454 FXYD1O00168 92 aa17.78■□□□□ 0.44
PNKP-212ENST00000599454 SGCEO43556 437 aa17.78■□□□□ 0.44
PNKP-212ENST00000599454 TREML4Q6UXN2 200 aa17.78■□□□□ 0.44
PNKP-212ENST00000599454 OAFQ86UD1 273 aa17.78■□□□□ 0.44
PNKP-212ENST00000599454 FAM156AQ8NDB6 213 aa17.78■□□□□ 0.44
PNKP-212ENST00000599454 OR51A7Q8NH64 312 aa17.78■□□□□ 0.44
PNKP-212ENST00000599454 PTP4A1Q93096 173 aa17.78■□□□□ 0.44
PNKP-212ENST00000599454 CMBLQ96DG6 245 aa17.78■□□□□ 0.44
PNKP-212ENST00000599454 ZNF583Q96ND8 569 aa17.78■□□□□ 0.44
PNKP-212ENST00000599454 OR2V2Q96R30 315 aa17.78■□□□□ 0.44
PNKP-212ENST00000599454 POFUT1Q9H488 388 aa17.78■□□□□ 0.44
PNKP-212ENST00000599454 TRAV27A0A087WT01 109 aa17.77■□□□□ 0.44
PNKP-212ENST00000599454 CEACAM18A8MTB9 384 aa17.77■□□□□ 0.44
PNKP-212ENST00000599454 TMEM178BH3BS89 294 aa17.77■□□□□ 0.44
PNKP-212ENST00000599454 KDELR2P33947 212 aa17.77■□□□□ 0.44
PNKP-212ENST00000599454 GUCY1A3Q02108 690 aa17.77■□□□□ 0.44
PNKP-212ENST00000599454 PRKCDQ05655 676 aa17.77■□□□□ 0.44
PNKP-212ENST00000599454 HNRNPA0Q13151 305 aaKnown RBP17.77■□□□□ 0.44
PNKP-212ENST00000599454 LRRC23Q53EV4 343 aaPredicted RBP17.77■□□□□ 0.44
PNKP-212ENST00000599454 TTMPQ5BVD1 217 aa17.77■□□□□ 0.44
PNKP-212ENST00000599454 SLC27A4Q6P1M0 643 aa17.77■□□□□ 0.44
PNKP-212ENST00000599454 BTNL3Q6UXE8 466 aa17.77■□□□□ 0.44
PNKP-212ENST00000599454 LRRN1Q6UXK5 716 aa17.77■□□□□ 0.44
PNKP-212ENST00000599454 VASH1Q7L8A9 365 aaPredicted RBP17.77■□□□□ 0.44
PNKP-212ENST00000599454 NRMQ8IXM6 262 aa17.77■□□□□ 0.44
PNKP-212ENST00000599454 OFCC1Q8IZS5 231 aa17.77■□□□□ 0.44
PNKP-212ENST00000599454 OR52E2Q8NGJ4 325 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms