RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 NDRG3Q9UGV2 375 aa10.19□□□□□ -0.78
CDRT1-207ENST00000583965 CYB5R1Q9UHQ9 305 aa10.19□□□□□ -0.78
CDRT1-207ENST00000583965 FBXL3Q9UKT7 428 aa10.19□□□□□ -0.78
CDRT1-207ENST00000583965 EXOGQ9Y2C4 368 aaKnown RBP10.19□□□□□ -0.78
CDRT1-207ENST00000583965 LHFPL6Q9Y693 200 aa10.19□□□□□ -0.78
CDRT1-207ENST00000583965 TMEM14AQ9Y6G1 99 aa10.19□□□□□ -0.78
CDRT1-207ENST00000583965 ICE1Q9Y2F5 2266 aa10.19□□□□□ -0.78
CDRT1-207ENST00000583965 CADP27708 2225 aa10.19□□□□□ -0.78
CDRT1-207ENST00000583965 SPTAN1Q13813 2472 aaKnown RBP10.18□□□□□ -0.78
CDRT1-207ENST00000583965 DOPEY2Q9Y3R5 2298 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 SMIM31A0A1B0GVY4 71 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 EFCAB10A6NFE3 127 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 PHYHO14832 338 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 XPNPEP2O43895 674 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 SELENOFO60613 162 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 FAM20BO75063 409 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 FADS2O95864 444 aaKnown RBP10.18□□□□□ -0.78
CDRT1-207ENST00000583965 HTR1AP08908 422 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 MMP7P09237 267 aaPredicted RBP10.18□□□□□ -0.78
CDRT1-207ENST00000583965 SPARCP09486 303 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 OR2T7P0C7T2 308 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 CD79AP11912 226 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 ATP6V1B1P15313 513 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 NAA10P41227 235 aaPredicted RBP10.18□□□□□ -0.78
CDRT1-207ENST00000583965 CAPZA2P47755 286 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 CDH15P55291 814 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 HIST1H3AP68431 136 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 PPA1Q15181 289 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 GSG1Q2KHT4 349 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 C3orf36Q3SXR2 165 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 HIST2H3PS2Q5TEC6 136 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 SLC18B1Q6NT16 456 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 B3GLCTQ6Y288 498 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 HIST2H3AQ71DI3 136 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 PRSS48Q7RTY5 328 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 DPY19L4Q7Z388 723 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.18□□□□□ -0.78
CDRT1-207ENST00000583965 CDC20BQ86Y33 519 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 OR2T27Q8NH04 317 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 OR52N5Q8NH56 324 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 OTOSQ8NHW6 89 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 HTRA1Q92743 480 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 LGALS12Q96DT0 336 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 FBXO17Q96EF6 278 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 MYCBPQ99417 103 aaPredicted RBP10.18□□□□□ -0.78
CDRT1-207ENST00000583965 C1orf198Q9H425 327 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 RNF121Q9H920 327 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 PAK1IP1Q9NWT1 392 aaPredicted RBP10.18□□□□□ -0.78
CDRT1-207ENST00000583965 B3GNT2Q9NY97 397 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 ASH2LQ9UBL3 628 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 ATPIF1Q9UII2 106 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 TIMM10BQ9Y5J6 103 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 SLC25A15Q9Y619 301 aa10.18□□□□□ -0.78
CDRT1-207ENST00000583965 UTP20O75691 2785 aaKnown RBP10.17□□□□□ -0.78
CDRT1-207ENST00000583965 PKDREJQ9NTG1 2253 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 RAB36O95755 333 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 PTHP01270 115 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 HLA-HP01893 362 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 MRPL3P09001 348 aaKnown RBP10.17□□□□□ -0.78
CDRT1-207ENST00000583965 CBR1P16152 277 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 ZNF32P17041 273 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 EEF1B2P24534 225 aaKnown RBP10.17□□□□□ -0.78
CDRT1-207ENST00000583965 GRNP28799 593 aaKnown RBP10.17□□□□□ -0.78
CDRT1-207ENST00000583965 RAB1AP62820 205 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 ACTC1P68032 377 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 ACTA1P68133 377 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 MVKQ03426 396 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 TAB1Q15750 504 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 RHOUQ7L0Q8 258 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 SLC35F2Q8IXU6 374 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 ALDH16A1Q8IZ83 802 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 SPARTQ8N0X7 666 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 ZNF540Q8NDQ6 660 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 ASB17Q8WXJ9 295 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 GGHQ92820 318 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 MYDGFQ969H8 173 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 MED18Q9BUE0 208 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 OR2H1Q9GZK4 316 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 HDHD2Q9H0R4 259 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 SLC24A3Q9HC58 644 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 VCX3AQ9NNX9 186 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 AMBNQ9NP70 447 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 FGF20Q9NP95 211 aaPredicted RBP10.17□□□□□ -0.78
CDRT1-207ENST00000583965 NGBQ9NPG2 151 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 NPDC1Q9NQX5 325 aaPredicted RBP10.17□□□□□ -0.78
CDRT1-207ENST00000583965 INPP5EQ9NRR6 644 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 CRNNQ9UBG3 495 aaPredicted RBP10.17□□□□□ -0.78
CDRT1-207ENST00000583965 LAMP5Q9UJQ1 280 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 GDF2Q9UK05 429 aaPredicted RBP10.17□□□□□ -0.78
CDRT1-207ENST00000583965 PLCE1Q9P212 2302 aa10.17□□□□□ -0.78
CDRT1-207ENST00000583965 FASNP49327 2511 aaKnown RBP10.16□□□□□ -0.78
CDRT1-207ENST00000583965 USP9YO00507 2555 aaPredicted RBP10.16□□□□□ -0.78
CDRT1-207ENST00000583965 IQCMA0A1B0GVH7 501 aa10.16□□□□□ -0.78
CDRT1-207ENST00000583965 TUBAL3A6NHL2 446 aa10.16□□□□□ -0.78
CDRT1-207ENST00000583965 ZNF670-ZNF695F2Z2N8 137 aa10.16□□□□□ -0.78
CDRT1-207ENST00000583965 J3QRE1 110 aa10.16□□□□□ -0.78
CDRT1-207ENST00000583965 SGCEO43556 437 aa10.16□□□□□ -0.78
CDRT1-207ENST00000583965 RGS10O43665 173 aa10.16□□□□□ -0.78
CDRT1-207ENST00000583965 IGKV3-15P01624 115 aa10.16□□□□□ -0.78
CDRT1-207ENST00000583965 IGHA1P01876 353 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms