RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 FBXO17Q96EF6 278 aa14.31□□□□□ -0.12
CDK5RAP3-228ENST00000583363 CDCA4Q9BXL8 241 aa14.31□□□□□ -0.12
CDK5RAP3-228ENST00000583363 HDHD5Q9BXW7 423 aa14.31□□□□□ -0.12
CDK5RAP3-228ENST00000583363 INPP5EQ9NRR6 644 aa14.31□□□□□ -0.12
CDK5RAP3-228ENST00000583363 COPS3Q9UNS2 423 aa14.31□□□□□ -0.12
CDK5RAP3-228ENST00000583363 TMEM14AQ9Y6G1 99 aa14.31□□□□□ -0.12
CDK5RAP3-228ENST00000583363 A0A1W2PQL4 384 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 MAGEA13PA6NCF6 341 aa14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 C12orf71A8MTZ7 269 aa14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 PSMB1P20618 241 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 ACTC1P68032 377 aa14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 ACTA1P68133 377 aa14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 HIST1H3AP68431 136 aa14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 ZNF85Q03923 595 aa14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 FAM27E3Q08E93 113 aa14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 IRF3Q14653 427 aa14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 TSC22D1Q15714 1073 aa14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 TBRG1Q3YBR2 411 aa14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 HIST2H3PS2Q5TEC6 136 aa14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 SLC18B1Q6NT16 456 aa14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 CORO6Q6QEF8 472 aa14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 HIST2H3AQ71DI3 136 aa14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 BHLHA15Q7RTS1 189 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 SLC16A14Q7RTX9 510 aa14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 LHFPL3Q86UP9 236 aa14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 LINC00346Q8IVM7 164 aa14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 OR2AJ1Q8NGZ0 328 aa14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 FGFBP3Q8TAT2 258 aa14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 TBX5Q99593 518 aa14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 KCNN2Q9H2S1 579 aa14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 ERVK13-1Q9NX77 482 aa14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 ZNF224Q9NZL3 707 aa14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 CLEC2DQ9UHP7 191 aa14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 LAMP5Q9UJQ1 280 aa14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 GDF2Q9UK05 429 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 KLHDC2Q9Y2U9 406 aa14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 EXOSC1Q9Y3B2 195 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-228ENST00000583363 DAPL1A0PJW8 107 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 ZNF670-ZNF695F2Z2N8 137 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 PHYHO14832 338 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 RAD51DO75771 328 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 MT-ND2P03891 347 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 MMP7P09237 267 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 PATE4P0C8F1 98 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 LIMS3P0CW19 117 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 LIMS4P0CW20 117 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 CD79BP40259 229 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 ETV1P50549 477 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 PCBD1P61457 104 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 AQP6Q13520 282 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 EIF2B1Q14232 305 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 HIKESHIQ53FT3 197 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 ZNF773Q6PK81 442 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 SSX6Q7RTT6 188 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 DCXRQ7Z4W1 244 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 CCDC36Q8IYA8 594 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 WDR31Q8NA23 367 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 GJC3Q8NFK1 279 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 TSPAN14Q8NG11 270 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 ST7LQ8TDW4 575 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 THEM6Q8WUY1 208 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 MAP6Q96JE9 813 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 ABHD6Q9BV23 337 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 CCDC90BQ9GZT6 254 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 C1orf198Q9H425 327 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 CHCHD3Q9NX63 227 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 B3GNT2Q9NY97 397 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 ASH2LQ9UBL3 628 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 POLR1DQ9Y2S0 133 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 TIMM10BQ9Y5J6 103 aa14.29□□□□□ -0.12
CDK5RAP3-228ENST00000583363 A0A087WXM4 84 aa14.28□□□□□ -0.12
CDK5RAP3-228ENST00000583363 ZNF32P17041 273 aa14.28□□□□□ -0.12
CDK5RAP3-228ENST00000583363 MYL12AP19105 171 aa14.28□□□□□ -0.12
CDK5RAP3-228ENST00000583363 AGAP20933 346 aa14.28□□□□□ -0.12
CDK5RAP3-228ENST00000583363 ASCL1P50553 236 aa14.28□□□□□ -0.12
CDK5RAP3-228ENST00000583363 GALEQ14376 348 aa14.28□□□□□ -0.12
CDK5RAP3-228ENST00000583363 CDSNQ15517 529 aa14.28□□□□□ -0.12
CDK5RAP3-228ENST00000583363 FBXL19-AS1Q494R0 122 aa14.28□□□□□ -0.12
CDK5RAP3-228ENST00000583363 SLC36A2Q495M3 483 aa14.28□□□□□ -0.12
CDK5RAP3-228ENST00000583363 CCDC92Q53HC0 331 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-228ENST00000583363 XKRXQ6PP77 449 aa14.28□□□□□ -0.12
CDK5RAP3-228ENST00000583363 DPPA2Q7Z7J5 298 aa14.28□□□□□ -0.12
CDK5RAP3-228ENST00000583363 SPARTQ8N0X7 666 aa14.28□□□□□ -0.12
CDK5RAP3-228ENST00000583363 C17orf78Q8N4C9 275 aa14.28□□□□□ -0.12
CDK5RAP3-228ENST00000583363 RFLNBQ8N5W9 214 aa14.28□□□□□ -0.12
CDK5RAP3-228ENST00000583363 NANOGP1Q8N7R0 232 aa14.28□□□□□ -0.12
CDK5RAP3-228ENST00000583363 ASB17Q8WXJ9 295 aa14.28□□□□□ -0.12
CDK5RAP3-228ENST00000583363 AMELYQ99218 206 aa14.28□□□□□ -0.12
CDK5RAP3-228ENST00000583363 SLC17A5Q9NRA2 495 aa14.28□□□□□ -0.12
CDK5RAP3-228ENST00000583363 GALNT8Q9NY28 637 aa14.28□□□□□ -0.12
CDK5RAP3-228ENST00000583363 CACNA1CQ13936 2221 aa14.27□□□□□ -0.12
CDK5RAP3-228ENST00000583363 ARPC4-TTLL3A0A0A6YYG9 625 aa14.27□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ZNF503-AS2A6NEH8 195 aa14.27□□□□□ -0.13
CDK5RAP3-228ENST00000583363 TRIM64CA6NLI5 447 aa14.27□□□□□ -0.13
CDK5RAP3-228ENST00000583363 PRR32B1ATL7 298 aa14.27□□□□□ -0.13
CDK5RAP3-228ENST00000583363 C16orf97H3BN30 126 aa14.27□□□□□ -0.13
CDK5RAP3-228ENST00000583363 RER1O15258 196 aa14.27□□□□□ -0.13
CDK5RAP3-228ENST00000583363 HLA-HP01893 362 aa14.27□□□□□ -0.13
CDK5RAP3-228ENST00000583363 PRF1P14222 555 aa14.27□□□□□ -0.13
CDK5RAP3-228ENST00000583363 IL32P24001 234 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms