RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 HSFY1Q96LI6 401 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 PLIN2Q99541 437 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 C20orf85Q9H1P6 137 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 RSPH9Q9H1X1 276 aaPredicted RBP1.94□□□□□ -2.1
COPS3-217ENST00000583160 THAP9Q9H5L6 903 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 PRORYQ9H606 182 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 SGK2Q9HBY8 427 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 PRSS16Q9NQE7 514 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 SPASTQ9UBP0 616 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 SUN2Q9UH99 717 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 LSM7Q9UK45 103 aaKnown RBP1.94□□□□□ -2.1
COPS3-217ENST00000583160 NBEAQ8NFP9 2946 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 IGSF10Q6WRI0 2623 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 ATMQ13315 3056 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 MGAQ8IWI9 3026 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 ASH1LQ9NR48 2969 aaKnown RBP1.93□□□□□ -2.1
COPS3-217ENST00000583160 UNC13CQ8NB66 2214 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 IGHV1OR21-1A0A087WYE8 117 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 GOLGA8IPA6NC78 632 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 GOLGA8JA6NMD2 632 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 CLDN5O00501 218 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 SDHDO14521 159 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 XPO1O14980 1071 aaKnown RBP1.93□□□□□ -2.1
COPS3-217ENST00000583160 AGPAT2O15120 278 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 HLA-DRAP01903 254 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 IGKV4-1P06312 121 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 GP1BAP07359 652 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 PAEPP09466 180 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 GIMD1P0DJR0 217 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 FMO3P31513 532 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 SLC26A3P40879 764 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 CASP4P49662 377 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 ACADVLP49748 655 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 MAP3K7CLP57077 242 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 DAOAP59103 153 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 RPS14P62263 151 aaKnown RBP1.93□□□□□ -2.1
COPS3-217ENST00000583160 TNNC1P63316 161 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 GAMTQ14353 236 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 HNRNPA1L2Q32P51 320 aaKnown RBP1.93□□□□□ -2.1
COPS3-217ENST00000583160 ZNF311Q5JNZ3 666 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 NANOGP8Q6NSW7 305 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 ZNF571Q7Z3V5 609 aaPredicted RBP1.93□□□□□ -2.1
COPS3-217ENST00000583160 ACOT1Q86TX2 421 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 TRIM69Q86WT6 500 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 MMAAQ8IVH4 418 aaKnown RBP1.93□□□□□ -2.1
COPS3-217ENST00000583160 ELMOD2Q8IZ81 293 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 RDH10Q8IZV5 341 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 C12orf29Q8N999 325 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 FBXL13Q8NEE6 735 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 OR2T34Q8NGX1 318 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 SLC2A14Q8TDB8 520 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 NT5C3BQ969T7 300 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 EXOSC8Q96B26 276 aaKnown RBP1.93□□□□□ -2.1
COPS3-217ENST00000583160 PAGE5Q96GU1 130 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 ZNF396Q96N95 335 aaPredicted RBP1.93□□□□□ -2.1
COPS3-217ENST00000583160 GSDMAQ96QA5 445 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 VPS35Q96QK1 796 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 NDFIP1Q9BT67 221 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 NAT9Q9BTE0 207 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 BBS2Q9BXC9 721 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 GSDMCQ9BYG8 508 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 CLMPQ9H6B4 373 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 FOLH1BQ9HBA9 442 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 RAB20Q9NX57 234 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 ZNF226Q9NYT6 803 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 AIPL1Q9NZN9 384 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 HMGXB4Q9UGU5 601 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 CFAP45Q9UL16 551 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 ALG6Q9Y672 507 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 ITPR1Q14643 2758 aa1.93□□□□□ -2.1
COPS3-217ENST00000583160 BSNQ9UPA5 3926 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 AHCTF1Q8WYP5 2266 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 KIR2DS1A0A191URI9 304 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 SPAARA0A1B0GVQ0 90 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 POLR2DO15514 142 aaKnown RBP1.92□□□□□ -2.1
COPS3-217ENST00000583160 STX10O60499 249 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 SUPT3HO75486 399 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 CA1P00915 261 aaPredicted RBP1.92□□□□□ -2.1
COPS3-217ENST00000583160 RNASE2P10153 161 aaKnown RBP1.92□□□□□ -2.1
COPS3-217ENST00000583160 HLA-EP13747 358 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 CCDC130P13994 396 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 ETS1P14921 441 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 FGF9P31371 208 aaPredicted RBP1.92□□□□□ -2.1
COPS3-217ENST00000583160 PPP1R2P41236 205 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 CSNK1EP49674 416 aaKnown RBP1.92□□□□□ -2.1
COPS3-217ENST00000583160 YBEYP58557 167 aaPredicted RBP1.92□□□□□ -2.1
COPS3-217ENST00000583160 YWHAGP61981 247 aaKnown RBP eCLIP1.92□□□□□ -2.1
COPS3-217ENST00000583160 YWHAEP62258 255 aaKnown RBP1.92□□□□□ -2.1
COPS3-217ENST00000583160 KDSRQ06136 332 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 BST2Q10589 180 aaKnown RBP1.92□□□□□ -2.1
COPS3-217ENST00000583160 GRB7Q14451 532 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 GNMTQ14749 295 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 KIR2DS1Q14954 304 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 PDK1Q15118 436 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 TRIM16LQ309B1 348 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 LRRC10Q5BKY1 277 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 C10orf120Q5SQS8 335 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 C9orf64Q5T6V5 341 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 TIGD3Q6B0B8 471 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 FAM173BQ6P4H8 233 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms