RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 A0A087WV48 116 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 A0A0B4J203 849 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 TTLL8A6PVC2 850 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 PNPP00491 289 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 KIR2DL3P43628 341 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 CYB561P49447 251 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 EIF2B2P49770 351 aaKnown RBP20.16■□□□□ 0.82
CCDC47-204ENST00000582252 POU4F3Q15319 338 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 TOMM20Q15388 145 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 SLC25A47Q6Q0C1 308 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 MDGA2Q7Z553 956 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 TRIM63Q969Q1 353 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 IP6K3Q96PC2 410 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 IL17BQ9UHF5 180 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 OR52A1Q9UKL2 312 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 SLC22A13Q9Y226 551 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 POLR1DQ9Y2S0 133 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 MASP2O00187 686 aa20.15■□□□□ 0.82
CCDC47-204ENST00000582252 SRSF10O75494 262 aaKnown RBP20.15■□□□□ 0.82
CCDC47-204ENST00000582252 ISG15P05161 165 aa20.15■□□□□ 0.82
CCDC47-204ENST00000582252 UBCP0CG48 685 aaKnown RBP20.15■□□□□ 0.82
CCDC47-204ENST00000582252 ACHEP22303 614 aa20.15■□□□□ 0.82
CCDC47-204ENST00000582252 TPTEP56180 551 aa20.15■□□□□ 0.82
CCDC47-204ENST00000582252 H3F3AP84243 136 aa20.15■□□□□ 0.82
CCDC47-204ENST00000582252 MFGE8Q08431 387 aaPredicted RBP20.15■□□□□ 0.82
CCDC47-204ENST00000582252 TMEM244Q5VVB8 128 aa20.15■□□□□ 0.82
CCDC47-204ENST00000582252 OR2AJ1Q8NGZ0 328 aa20.15■□□□□ 0.82
CCDC47-204ENST00000582252 OR10AC1Q8NH08 325 aa20.15■□□□□ 0.82
CCDC47-204ENST00000582252 C15orf40Q8WUR7 153 aa20.15■□□□□ 0.82
CCDC47-204ENST00000582252 ABHD1Q96SE0 405 aa20.15■□□□□ 0.82
CCDC47-204ENST00000582252 MMP28Q9H239 520 aa20.15■□□□□ 0.82
CCDC47-204ENST00000582252 ABI3Q9P2A4 366 aa20.15■□□□□ 0.82
CCDC47-204ENST00000582252 CYB5R1Q9UHQ9 305 aa20.15■□□□□ 0.82
CCDC47-204ENST00000582252 HHLA2Q9UM44 414 aa20.15■□□□□ 0.82
CCDC47-204ENST00000582252 FOXJ3Q9UPW0 622 aa20.15■□□□□ 0.82
CCDC47-204ENST00000582252 MRPS18BQ9Y676 258 aaKnown RBP20.15■□□□□ 0.82
CCDC47-204ENST00000582252 CENPXA8MT69 81 aa20.14■□□□□ 0.81
CCDC47-204ENST00000582252 ZNF814B7Z6K7 855 aa20.14■□□□□ 0.81
CCDC47-204ENST00000582252 TFECO14948 347 aaPredicted RBP20.14■□□□□ 0.81
CCDC47-204ENST00000582252 EEF1E1O43324 174 aaKnown RBP20.14■□□□□ 0.81
CCDC47-204ENST00000582252 MAS1P04201 325 aa20.14■□□□□ 0.81
CCDC47-204ENST00000582252 CFPP27918 469 aa20.14■□□□□ 0.81
CCDC47-204ENST00000582252 B3GNTL1Q67FW5 361 aaPredicted RBP20.14■□□□□ 0.81
CCDC47-204ENST00000582252 CMTM4Q8IZR5 234 aa20.14■□□□□ 0.81
CCDC47-204ENST00000582252 OR51A4Q8NGJ6 313 aa20.14■□□□□ 0.81
CCDC47-204ENST00000582252 SLAMF6Q96DU3 332 aa20.14■□□□□ 0.81
CCDC47-204ENST00000582252 S100A16Q96FQ6 103 aaKnown RBP20.14■□□□□ 0.81
CCDC47-204ENST00000582252 ABCG5Q9H222 651 aa20.14■□□□□ 0.81
CCDC47-204ENST00000582252 CENPMQ9NSP4 180 aa20.14■□□□□ 0.81
CCDC47-204ENST00000582252 ANKRD10Q9NXR5 420 aa20.14■□□□□ 0.81
CCDC47-204ENST00000582252 EMC9Q9Y3B6 208 aa20.14■□□□□ 0.81
CCDC47-204ENST00000582252 TMEM269A0A1B0GVZ9 245 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 MEIOCA2RUB1 952 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 NPIPA2E9PIF3 369 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 NPIPA3F8WFD2 350 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 SULT1B1O43704 296 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 GSTZ1O43708 216 aaPredicted RBP20.13■□□□□ 0.81
CCDC47-204ENST00000582252 TRAPPC2P0DI81 140 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 TRAPPC2BP0DI82 140 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 ADRA2CP18825 462 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 CASRP41180 1078 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 DNASE1L1P49184 302 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 CLDN17P56750 224 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 TGIF1Q15583 401 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 HIST3H3Q16695 136 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 RSBN1Q5VWQ0 802 aaPredicted RBP20.13■□□□□ 0.81
CCDC47-204ENST00000582252 LRFN4Q6PJG9 635 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 RHOUQ7L0Q8 258 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 FCRLAQ7L513 359 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 ADAMTS17Q8TE56 1095 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 PNPLA2Q96AD5 504 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 THOC3Q96J01 351 aaKnown RBP20.13■□□□□ 0.81
CCDC47-204ENST00000582252 NIPAL2Q9H841 368 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 SEC61A2Q9H9S3 476 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 STEAP1Q9UHE8 339 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 MRPS18CQ9Y3D5 142 aaKnown RBP20.13■□□□□ 0.81
CCDC47-204ENST00000582252 CNTRLQ7Z7A1 2325 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 TRAV8-7A0A075B6U6 113 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 A0A1B0GVC2 190 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 A6NIN4 97 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 TPPPO94811 219 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 WNT11O96014 354 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 FSTP19883 344 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 GUCA1AP43080 201 aaPredicted RBP20.13■□□□□ 0.81
CCDC47-204ENST00000582252 MMP16P51512 607 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 ART1P52961 327 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 OC90Q02509 493 aaPredicted RBP20.13■□□□□ 0.81
CCDC47-204ENST00000582252 FOXC1Q12948 553 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 KCNMB1Q16558 191 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 CARTPTQ16568 116 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 BCL2L15Q5TBC7 163 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 CARD17Q5XLA6 110 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 BEST3Q8N1M1 668 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 UBE2J2Q8N2K1 259 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 DTX3Q8N9I9 347 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 OR14L1PQ8NHC6 308 aa20.13■□□□□ 0.81
CCDC47-204ENST00000582252 C7orf50Q9BRJ6 194 aaKnown RBP20.13■□□□□ 0.81
CCDC47-204ENST00000582252 MRPS7Q9Y2R9 242 aaKnown RBP20.13■□□□□ 0.81
CCDC47-204ENST00000582252 PCSK5Q92824 1860 aa20.12■□□□□ 0.81
CCDC47-204ENST00000582252 MRPS10P82664 201 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms