RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 SLC25A14O95258 325 aaPredicted RBP2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 SERPINE2P07093 398 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 DUX4L2P0CJ85 424 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 DUX4L3P0CJ86 424 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 DUX4L5P0CJ88 424 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 DUX4L6P0CJ89 424 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 DUX4L7P0CJ90 424 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 GGT1P19440 569 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 PFN3P60673 137 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 GBE1Q04446 702 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 ZNF726P1Q15940 193 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 METTL21CQ5VZV1 264 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 TTC23LQ6PF05 361 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 CEMP1Q6PRD7 247 aaPredicted RBP2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 TMEM220Q6QAJ8 160 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 FBXW12Q6X9E4 464 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 BIVMQ86UB2 503 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 PRSS58Q8IYP2 241 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 C15orf56Q8N910 161 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 NOXO1Q8NFA2 376 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 NUBPLQ8TB37 319 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 ZNF681Q96N22 645 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 GSDMAQ96QA5 445 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 BPIFA3Q9BQP9 254 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 BEX1Q9HBH7 125 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 RETNQ9HD89 108 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 DUX4Q9UBX2 424 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 KCNE3Q9Y6H6 103 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 GPATCH8Q9UKJ3 1502 aaKnown RBP2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 DENND4AQ7Z401 1863 aa2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 IGLV1-36A0A0B4J1U3 117 aa2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 SMKR1H3BMG3 65 aa2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 RDH16O75452 317 aa2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 EIF4EP06730 217 aaKnown RBP2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 ERCC1P07992 297 aaPredicted RBP2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 GALP22466 123 aa2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 WARSP23381 471 aaKnown RBP2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 VSX2P58304 361 aaPredicted RBP2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 ARG2P78540 354 aa2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 SP4Q02446 784 aa2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 TRAM2Q15035 370 aa2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 PON2Q15165 354 aa2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 PSMD5Q16401 504 aa2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 UBE2SQ16763 222 aa2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 LINC00483Q53H64 154 aa2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 PP632Q6XCG6 107 aa2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 Q6ZR03 302 aa2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 SCD5Q86SK9 330 aa2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 GABRG1Q8N1C3 465 aa2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 ABHD3Q8WU67 409 aa2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 PDXPQ96GD0 296 aa2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 C11orf70Q9BRQ4 267 aa2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 NDFIP1Q9BT67 221 aa2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 PARP12Q9H0J9 701 aaKnown RBP2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 RPP21Q9H633 154 aaKnown RBP2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 EXO5Q9H790 373 aa2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 C12orf10Q9HB07 376 aa2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 TMEM165Q9HC07 324 aa2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 LYARQ9NX58 379 aaKnown RBP2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 MTCH1Q9NZJ7 389 aa2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 CTSFQ9UBX1 484 aa2.84□□□□□ -1.95
SMCHD1-205ENST00000581383 IGKV6-21A0A0C4DH24 114 aa2.83□□□□□ -1.96
SMCHD1-205ENST00000581383 IGHV5-10-1A0A0J9YXX1 117 aa2.83□□□□□ -1.96
SMCHD1-205ENST00000581383 SERTM2A0A1B0GWG4 89 aa2.83□□□□□ -1.96
SMCHD1-205ENST00000581383 L7N2F9 121 aa2.83□□□□□ -1.96
SMCHD1-205ENST00000581383 CCNB2O95067 398 aa2.83□□□□□ -1.96
SMCHD1-205ENST00000581383 CTDNEP1O95476 244 aa2.83□□□□□ -1.96
SMCHD1-205ENST00000581383 ARG1P05089 322 aa2.83□□□□□ -1.96
SMCHD1-205ENST00000581383 UBTFL6P0CB48 400 aaPredicted RBP2.83□□□□□ -1.96
SMCHD1-205ENST00000581383 MRPL19P49406 292 aaKnown RBP2.83□□□□□ -1.96
SMCHD1-205ENST00000581383 GPR107Q5VW38 600 aa2.83□□□□□ -1.96
SMCHD1-205ENST00000581383 TWF2Q6IBS0 349 aaKnown RBP2.83□□□□□ -1.96
SMCHD1-205ENST00000581383 C12orf54Q6X4T0 127 aa2.83□□□□□ -1.96
SMCHD1-205ENST00000581383 ZNF695Q8IW36 515 aa2.83□□□□□ -1.96
SMCHD1-205ENST00000581383 METTL13Q8N6R0 699 aa2.83□□□□□ -1.96
SMCHD1-205ENST00000581383 TTC29Q8NA56 475 aaPredicted RBP2.83□□□□□ -1.96
SMCHD1-205ENST00000581383 C8orf44Q96CB5 159 aa2.83□□□□□ -1.96
SMCHD1-205ENST00000581383 SPNS1Q9H2V7 528 aa2.83□□□□□ -1.96
SMCHD1-205ENST00000581383 SYNDIG1Q9H7V2 258 aa2.83□□□□□ -1.96
SMCHD1-205ENST00000581383 AGPAT4Q9NRZ5 378 aa2.83□□□□□ -1.96
SMCHD1-205ENST00000581383 TRMT112Q9UI30 125 aaKnown RBP2.83□□□□□ -1.96
SMCHD1-205ENST00000581383 INSRP06213 1382 aa2.83□□□□□ -1.96
SMCHD1-205ENST00000581383 NUP214P35658 2090 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 RSPH10B2B2RC85 870 aa2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 WRBO00258 174 aa2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 SCAMP2O15127 329 aaKnown RBP2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 RP2O75695 350 aa2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 FLOT1O75955 427 aa2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 RSPH10BP0C881 870 aa2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 IGFBP3P17936 291 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 HMOX2P30519 316 aa2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 OR1E1P30953 314 aa2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 LINC00315P59091 139 aa2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 UBE2NP61088 152 aaKnown RBP2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 ESRRGP62508 458 aa2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 CDH17Q12864 832 aa2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 ILKQ13418 452 aa2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 STK11Q15831 433 aa2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 SNRNP35Q16560 246 aaKnown RBP2.82□□□□□ -1.96
SMCHD1-205ENST00000581383 HSDL1Q3SXM5 330 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms