RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 CYB5R3P00387 301 aaPredicted RBP10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 QDPRP09417 244 aa10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 AQP1P29972 269 aa10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 PITPNBP48739 271 aa10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 MRPL19P49406 292 aaKnown RBP10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 PPP1CBP62140 327 aa10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 BLOC1S3Q6QNY0 202 aa10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 RFPL4BQ6ZWI9 263 aa10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 PXKQ7Z7A4 578 aa10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 RANBP3LQ86VV4 465 aaPredicted RBP10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 ARMC8Q8IUR7 673 aa10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 FUNDC1Q8IVP5 155 aa10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 C10orf111Q8N326 155 aa10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 ZNF420Q8TAQ5 688 aaPredicted RBP10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 LHX4Q969G2 390 aa10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 MOGAT1Q96PD6 335 aa10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 TMEM246Q9BRR3 403 aa10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 TMEM43Q9BTV4 400 aa10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 DPAGT1Q9H3H5 408 aa10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 TMEM38AQ9H6F2 299 aa10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 EVA1AQ9H8M9 152 aa10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 TMBIM4Q9HC24 238 aa10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 VAPAQ9P0L0 249 aa10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 CLN8Q9UBY8 286 aa10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 CGGBP1Q9UFW8 167 aaPredicted RBP10.94□□□□□ -0.66
CDK5RAP3-213ENST00000579605 LOC100509620A0A075B734 347 aa10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 IGHV1-69DA0A0B4J2H0 117 aa10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 ANKRD61A6NGH8 418 aa10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 PLPP3O14495 311 aa10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 PPP1R3DO95685 299 aa10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 IGHV1-69P01742 117 aa10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 GABRA5P31644 462 aa10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 CFHR2P36980 270 aa10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 IDH3AP50213 366 aa10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 GDI2P50395 445 aaKnown RBP10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 CDH12P55289 794 aa10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 MELKQ14680 651 aa10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 PAGE3Q5JUK9 113 aa10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 SWT1Q5T5J6 900 aaKnown RBP10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 LYPD2Q6UXB3 125 aa10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 UNQ6126/PRO20091Q6UXV3 157 aa10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 DPPA2Q7Z7J5 298 aa10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 AKR7LQ8NHP1 331 aa10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 LRTOMTQ8WZ04 291 aa10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 ZNF566Q969W8 418 aa10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 TLCD1Q96CP7 247 aa10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 POM121L2Q96KW2 1035 aa10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 OR2V2Q96R30 315 aa10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 TBX15Q96SF7 602 aa10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 CCDC28BQ9BUN5 200 aa10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 ANGPT4Q9Y264 503 aa10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 GMEB1Q9Y692 573 aa10.93□□□□□ -0.66
CDK5RAP3-213ENST00000579605 IGHV3-64DA0A0J9YX35 117 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 C22orf46C9J442 243 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 M0R3H8 397 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 ENSAO43768 121 aaKnown RBP10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 TPST2O60704 377 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 SHOX2O60902 331 aaPredicted RBP10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 MT-ATP6P00846 226 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 MMP7P09237 267 aaPredicted RBP10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 ADORA3P0DMS8 318 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 GPX2P18283 190 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 MMP16P51512 607 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 PSG7Q13046 419 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 AGKQ53H12 422 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 FAM201AQ5SY85 155 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 WDR25Q64LD2 544 aaPredicted RBP10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 ZNF613Q6PF04 617 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 Q6ZR03 302 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 C1orf122Q6ZSJ8 110 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 SLC35D2Q76EJ3 337 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 NLRC3Q7RTR2 1065 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 LDLRAD3Q86YD5 345 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 SMYD1Q8NB12 490 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 OR4S1Q8NGB4 309 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 OR5J2Q8NH18 312 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 LRRC8CQ8TDW0 803 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 C7orf26Q96N11 449 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 MCHR1Q99705 422 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 WFDC6Q9BQY6 131 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 KCNN2Q9H2S1 579 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 IKZF5Q9H5V7 419 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 CCNB1IP1Q9NPC3 277 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 IL19Q9UHD0 177 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 FAM96BQ9Y3D0 163 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 DOCK11Q5JSL3 2073 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 NOTCH3Q9UM47 2321 aa10.92□□□□□ -0.66
CDK5RAP3-213ENST00000579605 TRBV5-3A0A0A0MS03 114 aa10.91□□□□□ -0.66
CDK5RAP3-213ENST00000579605 BTBD17A6NE02 478 aa10.91□□□□□ -0.66
CDK5RAP3-213ENST00000579605 ZNF879B4DU55 563 aa10.91□□□□□ -0.66
CDK5RAP3-213ENST00000579605 SURF4O15260 269 aa10.91□□□□□ -0.66
CDK5RAP3-213ENST00000579605 FMO6PO60774 539 aa10.91□□□□□ -0.66
CDK5RAP3-213ENST00000579605 TGFBR2P37173 567 aa10.91□□□□□ -0.66
CDK5RAP3-213ENST00000579605 ZNF84P51523 738 aa10.91□□□□□ -0.66
CDK5RAP3-213ENST00000579605 COL10A1Q03692 680 aa10.91□□□□□ -0.66
CDK5RAP3-213ENST00000579605 TAF11Q15544 211 aa10.91□□□□□ -0.66
CDK5RAP3-213ENST00000579605 ZBTB37Q5TC79 503 aa10.91□□□□□ -0.66
CDK5RAP3-213ENST00000579605 GALNT4Q8N4A0 578 aa10.91□□□□□ -0.66
CDK5RAP3-213ENST00000579605 ATG16L2Q8NAA4 619 aa10.91□□□□□ -0.66
CDK5RAP3-213ENST00000579605 C11orf65Q8NCR3 313 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms