RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 PROKR2Q8NFJ6 384 aa16.78■□□□□ 0.28
SS18-209ENST00000578595 OR2T33Q8NG76 320 aa16.78■□□□□ 0.28
SS18-209ENST00000578595 OR1J1Q8NGS3 322 aa16.78■□□□□ 0.28
SS18-209ENST00000578595 ABHD4Q8TB40 342 aa16.78■□□□□ 0.28
SS18-209ENST00000578595 FAM168AQ92567 244 aa16.78■□□□□ 0.28
SS18-209ENST00000578595 COX4I2Q96KJ9 171 aa16.78■□□□□ 0.28
SS18-209ENST00000578595 IL20Q9NYY1 176 aa16.78■□□□□ 0.28
SS18-209ENST00000578595 NDRG4Q9ULP0 352 aaKnown RBP16.78■□□□□ 0.28
SS18-209ENST00000578595 B9D1Q9UPM9 204 aa16.78■□□□□ 0.28
SS18-209ENST00000578595 SETD2Q9BYW2 2564 aaPredicted RBP16.77■□□□□ 0.28
SS18-209ENST00000578595 BHLHE40O14503 412 aa16.77■□□□□ 0.28
SS18-209ENST00000578595 TIPRLO75663 272 aa16.77■□□□□ 0.28
SS18-209ENST00000578595 POU1F1P28069 291 aa16.77■□□□□ 0.28
SS18-209ENST00000578595 ALDH3B1P43353 468 aa16.77■□□□□ 0.28
SS18-209ENST00000578595 UCP2P55851 309 aa16.77■□□□□ 0.28
SS18-209ENST00000578595 MSMPQ1L6U9 139 aa16.77■□□□□ 0.28
SS18-209ENST00000578595 SLC36A3Q495N2 470 aa16.77■□□□□ 0.28
SS18-209ENST00000578595 CLEC9AQ6UXN8 241 aa16.77■□□□□ 0.28
SS18-209ENST00000578595 TMEM179BQ7Z7N9 219 aa16.77■□□□□ 0.28
SS18-209ENST00000578595 SYT9Q86SS6 491 aa16.77■□□□□ 0.28
SS18-209ENST00000578595 BIVMQ86UB2 503 aa16.77■□□□□ 0.28
SS18-209ENST00000578595 HS3ST5Q8IZT8 346 aa16.77■□□□□ 0.28
SS18-209ENST00000578595 OR6V1Q8N148 313 aa16.77■□□□□ 0.28
SS18-209ENST00000578595 ZCCHC24Q8N2G6 241 aaKnown RBP16.77■□□□□ 0.28
SS18-209ENST00000578595 SYNPRQ8TBG9 265 aa16.77■□□□□ 0.28
SS18-209ENST00000578595 SNX33Q8WV41 574 aa16.77■□□□□ 0.28
SS18-209ENST00000578595 OTULINQ96BN8 352 aa16.77■□□□□ 0.28
SS18-209ENST00000578595 POM121L2Q96KW2 1035 aa16.77■□□□□ 0.28
SS18-209ENST00000578595 RACGAP1Q9H0H5 632 aa16.77■□□□□ 0.28
SS18-209ENST00000578595 MMADHCQ9H3L0 296 aaPredicted RBP16.77■□□□□ 0.28
SS18-209ENST00000578595 DNAJB9Q9UBS3 223 aa16.77■□□□□ 0.28
SS18-209ENST00000578595 LOC100509620A0A075B734 347 aa16.76■□□□□ 0.27
SS18-209ENST00000578595 OR6C68A6NDL8 312 aa16.76■□□□□ 0.27
SS18-209ENST00000578595 SYNGR3O43761 229 aa16.76■□□□□ 0.27
SS18-209ENST00000578595 DEAF1O75398 565 aaPredicted RBP16.76■□□□□ 0.27
SS18-209ENST00000578595 ABHD16AO95870 558 aa16.76■□□□□ 0.27
SS18-209ENST00000578595 IFNGP01579 166 aa16.76■□□□□ 0.27
SS18-209ENST00000578595 GCH1P30793 250 aa16.76■□□□□ 0.27
SS18-209ENST00000578595 PYCR1P32322 319 aa16.76■□□□□ 0.27
SS18-209ENST00000578595 KLF3P57682 345 aaPredicted RBP16.76■□□□□ 0.27
SS18-209ENST00000578595 LSM6P62312 80 aaKnown RBP16.76■□□□□ 0.27
SS18-209ENST00000578595 ARL9Q6T311 187 aa16.76■□□□□ 0.27
SS18-209ENST00000578595 ATG16L2Q8NAA4 619 aa16.76■□□□□ 0.27
SS18-209ENST00000578595 OR9Q1Q8NGQ5 310 aa16.76■□□□□ 0.27
SS18-209ENST00000578595 SNX18Q96RF0 628 aa16.76■□□□□ 0.27
SS18-209ENST00000578595 DOK1Q99704 481 aa16.76■□□□□ 0.27
SS18-209ENST00000578595 CDADC1Q9BWV3 514 aa16.76■□□□□ 0.27
SS18-209ENST00000578595 TAAR3PQ9P1P4 343 aa16.76■□□□□ 0.27
SS18-209ENST00000578595 MYEF2Q9P2K5 600 aaKnown RBP16.76■□□□□ 0.27
SS18-209ENST00000578595 BAIAP2Q9UQB8 552 aa16.76■□□□□ 0.27
SS18-209ENST00000578595 VPS13CQ709C8 3753 aa16.75■□□□□ 0.27
SS18-209ENST00000578595 ABCA1O95477 2261 aa16.75■□□□□ 0.27
SS18-209ENST00000578595 IGHV4-30-2A0A087WSY4 118 aa16.75■□□□□ 0.27
SS18-209ENST00000578595 IGLV1-36A0A0B4J1U3 117 aa16.75■□□□□ 0.27
SS18-209ENST00000578595 TMEM129A0AVI4 362 aa16.75■□□□□ 0.27
SS18-209ENST00000578595 RIIAD1A6NNX1 92 aa16.75■□□□□ 0.27
SS18-209ENST00000578595 CLPTM1O96005 669 aa16.75■□□□□ 0.27
SS18-209ENST00000578595 F12P00748 615 aaPredicted RBP16.75■□□□□ 0.27
SS18-209ENST00000578595 CSF3P09919 207 aa16.75■□□□□ 0.27
SS18-209ENST00000578595 PCSK6P29122 969 aa16.75■□□□□ 0.27
SS18-209ENST00000578595 PDLIM4P50479 330 aa16.75■□□□□ 0.27
SS18-209ENST00000578595 DSCR9P59020 149 aa16.75■□□□□ 0.27
SS18-209ENST00000578595 IQCF1Q8N6M8 205 aa16.75■□□□□ 0.27
SS18-209ENST00000578595 OR2AJ1Q8NGZ0 328 aa16.75■□□□□ 0.27
SS18-209ENST00000578595 OR4Q3Q8NH05 313 aa16.75■□□□□ 0.27
SS18-209ENST00000578595 WACQ9BTA9 647 aa16.75■□□□□ 0.27
SS18-209ENST00000578595 REG4Q9BYZ8 158 aa16.75■□□□□ 0.27
SS18-209ENST00000578595 ELOVL3Q9HB03 270 aa16.75■□□□□ 0.27
SS18-209ENST00000578595 REV1Q9UBZ9 1251 aa16.75■□□□□ 0.27
SS18-209ENST00000578595 GPR160Q9UJ42 338 aa16.75■□□□□ 0.27
SS18-209ENST00000578595 KLHL21Q9UJP4 597 aa16.75■□□□□ 0.27
SS18-209ENST00000578595 GRIP1Q9Y3R0 1128 aa16.75■□□□□ 0.27
SS18-209ENST00000578595 ZNF469Q96JG9 3925 aaPredicted RBP16.74■□□□□ 0.27
SS18-209ENST00000578595 ARRDC5A6NEK1 342 aa16.74■□□□□ 0.27
SS18-209ENST00000578595 RER1O15258 196 aa16.74■□□□□ 0.27
SS18-209ENST00000578595 GAAP10253 952 aa16.74■□□□□ 0.27
SS18-209ENST00000578595 ZNF823P16415 610 aa16.74■□□□□ 0.27
SS18-209ENST00000578595 ZNF3P17036 446 aa16.74■□□□□ 0.27
SS18-209ENST00000578595 PRKACGP22612 351 aa16.74■□□□□ 0.27
SS18-209ENST00000578595 WNT5AP41221 380 aa16.74■□□□□ 0.27
SS18-209ENST00000578595 TEKQ02763 1124 aa16.74■□□□□ 0.27
SS18-209ENST00000578595 COX10Q12887 443 aa16.74■□□□□ 0.27
SS18-209ENST00000578595 CRMP1Q14194 572 aa16.74■□□□□ 0.27
SS18-209ENST00000578595 TMEM154Q6P9G4 183 aa16.74■□□□□ 0.27
SS18-209ENST00000578595 CORO6Q6QEF8 472 aa16.74■□□□□ 0.27
SS18-209ENST00000578595 RFPL4BQ6ZWI9 263 aa16.74■□□□□ 0.27
SS18-209ENST00000578595 VASH1Q7L8A9 365 aaPredicted RBP16.74■□□□□ 0.27
SS18-209ENST00000578595 LINC00346Q8IVM7 164 aa16.74■□□□□ 0.27
SS18-209ENST00000578595 ZNF101Q8IZC7 436 aa16.74■□□□□ 0.27
SS18-209ENST00000578595 LNX2Q8N448 690 aa16.74■□□□□ 0.27
SS18-209ENST00000578595 SLC37A3Q8NCC5 494 aa16.74■□□□□ 0.27
SS18-209ENST00000578595 NPEPL1Q8NDH3 523 aa16.74■□□□□ 0.27
SS18-209ENST00000578595 OR51L1Q8NGJ5 315 aa16.74■□□□□ 0.27
SS18-209ENST00000578595 OR2T4Q8NH00 348 aa16.74■□□□□ 0.27
SS18-209ENST00000578595 SLCO4A1Q96BD0 722 aa16.74■□□□□ 0.27
SS18-209ENST00000578595 PIMREGQ9BSJ6 248 aa16.74■□□□□ 0.27
SS18-209ENST00000578595 MS4A5Q9H3V2 200 aa16.74■□□□□ 0.27
SS18-209ENST00000578595 YLPM1P49750 1951 aaKnown RBP16.73■□□□□ 0.27
SS18-209ENST00000578595 ZANQ9Y493 2812 aa16.73■□□□□ 0.27
SS18-209ENST00000578595 NAT2P11245 290 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms