RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 STK17BO94768 372 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 ERCC1P07992 297 aaPredicted RBP8.68□□□□□ -1.02
CCDC40-212ENST00000574799 OR13C7P0DN81 318 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 ST6GAL1P15907 406 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 HIST1H1TP22492 207 aaPredicted RBP8.68□□□□□ -1.02
CCDC40-212ENST00000574799 KIR2DL1P43626 348 aaPredicted RBP8.68□□□□□ -1.02
CCDC40-212ENST00000574799 CAMLGP49069 296 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 HYAL1Q12794 435 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 BIKQ13323 160 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 ELAVL3Q14576 367 aaKnown RBP8.68□□□□□ -1.02
CCDC40-212ENST00000574799 LCN10Q6JVE6 187 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 PARM1Q6UWI2 310 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 EDARADDQ8WWZ3 215 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 FAM46BQ96A09 425 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 TSSK2Q96PF2 358 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 DCAF16Q9NXF7 216 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 LPAR3Q9UBY5 353 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 PEX12O00623 359 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 DBIP07108 87 aaKnown RBP8.68□□□□□ -1.02
CCDC40-212ENST00000574799 NDUFS1P28331 727 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 CASP6P55212 293 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 LY6G6FQ5SQ64 297 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 OTPQ5XKR4 325 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 ZNF765Q7L2R6 523 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 LYG2Q86SG7 212 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 OR4A4PQ8NGN8 299 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 OR2G2Q8NGZ5 317 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 NUDCD2Q8WVJ2 157 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 ALG12Q9BV10 488 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 HDAC8Q9BY41 377 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 A0A087WV62 115 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 A0A1W2PPE2 198 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 UMAD1C9J7I0 102 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 TCAPO15273 167 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 NME2P1O60361 137 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 OR2C1O95371 312 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 ADH1CP00326 375 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 HOXB5P09067 269 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 GIMD1P0DJR0 217 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 NR2C1P13056 603 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 GNALP38405 381 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 GRK6P43250 576 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 CAV2P51636 162 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 ELOCQ15369 112 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 OR2A2Q6IF42 318 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 POMZP3Q6PJE2 187 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 TMEM64Q6YI46 380 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 NUS1Q96E22 293 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 TIMP4Q99727 224 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 FBXO7Q9Y3I1 522 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 ASPMQ8IZT6 3477 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 EDDM13A0A1B0GTR0 161 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 ZNF860A6NHJ4 632 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 J3QRE1 110 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 PHOX2AO14813 284 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 GMFGO60234 142 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 WNT11O96014 354 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 FOSL2P15408 326 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 GABRA3P34903 492 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 NANOS3P60323 173 aaKnown RBP8.67□□□□□ -1.02
CCDC40-212ENST00000574799 MLF2Q15773 248 aaPredicted RBP8.67□□□□□ -1.02
CCDC40-212ENST00000574799 ANKRD16Q6P6B7 361 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 FAM180AQ6UWF9 173 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 PEG10Q86TG7 708 aaKnown RBP8.67□□□□□ -1.02
CCDC40-212ENST00000574799 WFIKKN2Q8TEU8 576 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 FOXN4Q96NZ1 517 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 CST11Q9H112 138 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 UNKLQ9H9P5 680 aaKnown RBP8.67□□□□□ -1.02
CCDC40-212ENST00000574799 CGGBP1Q9UFW8 167 aaPredicted RBP8.67□□□□□ -1.02
CCDC40-212ENST00000574799 TRAV8-7A0A075B6U6 113 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 LOC100289279A0A1B0GTE1 492 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 ZNF705GA8MUZ8 300 aaPredicted RBP8.67□□□□□ -1.02
CCDC40-212ENST00000574799 DOK2O60496 412 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 EIF4E2O60573 245 aaKnown RBP8.67□□□□□ -1.02
CCDC40-212ENST00000574799 CYTIPO60759 359 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 THY1P04216 161 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 SLC25A4P12235 298 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 SELLP14151 372 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 IL9P15248 144 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 GSK3AP49840 483 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 DUSP5Q16690 384 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 GLYATL3Q5SZD4 288 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 ZNF679Q8IYX0 411 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 LRRC25Q8N386 305 aaPredicted RBP8.67□□□□□ -1.02
CCDC40-212ENST00000574799 LINC01555Q8NAE3 123 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 POM121Q96HA1 1249 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 ZNF514Q96K75 400 aaPredicted RBP8.67□□□□□ -1.02
CCDC40-212ENST00000574799 IP6K3Q96PC2 410 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 OCSTAMPQ9BR26 566 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 RAB33BQ9H082 229 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 CRLF2Q9HC73 371 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 DHDHQ9UQ10 334 aa8.67□□□□□ -1.02
CCDC40-212ENST00000574799 A0A0A6YYC8 382 aaPredicted RBP8.66□□□□□ -1.02
CCDC40-212ENST00000574799 C4orf51C9J302 202 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 H7C1C5 153 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 I3L1I5 382 aaPredicted RBP8.66□□□□□ -1.02
CCDC40-212ENST00000574799 PET100P0DJ07 73 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 THEGLP0DJG4 465 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 NDUFB7P17568 137 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 CD96P40200 585 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms