RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 SPANXN2Q5MJ10 180 aa4.09□□□□□ -1.75
SMG1-204ENST00000561940 PPM1LQ5SGD2 360 aa4.09□□□□□ -1.75
SMG1-204ENST00000561940 LCE3AQ5TA76 89 aa4.09□□□□□ -1.75
SMG1-204ENST00000561940 CYB5R2Q6BCY4 276 aa4.09□□□□□ -1.75
SMG1-204ENST00000561940 CCDC73Q6ZRK6 1079 aa4.09□□□□□ -1.75
SMG1-204ENST00000561940 MKXQ8IYA7 352 aa4.09□□□□□ -1.75
SMG1-204ENST00000561940 OFCC1Q8IZS5 231 aa4.09□□□□□ -1.75
SMG1-204ENST00000561940 LIX1Q8N485 282 aa4.09□□□□□ -1.75
SMG1-204ENST00000561940 ARIH2OSQ8N7S6 290 aa4.09□□□□□ -1.75
SMG1-204ENST00000561940 OR10R2Q8NGX6 335 aa4.09□□□□□ -1.75
SMG1-204ENST00000561940 OR6X1Q8NH79 312 aa4.09□□□□□ -1.75
SMG1-204ENST00000561940 FAM81AQ8TBF8 368 aa4.09□□□□□ -1.75
SMG1-204ENST00000561940 MCOLN3Q8TDD5 553 aa4.09□□□□□ -1.75
SMG1-204ENST00000561940 ZNF578Q96N58 590 aaPredicted RBP4.09□□□□□ -1.75
SMG1-204ENST00000561940 OR5B12Q96R08 314 aa4.09□□□□□ -1.75
SMG1-204ENST00000561940 CDC42EP4Q9H3Q1 356 aaKnown RBP4.09□□□□□ -1.75
SMG1-204ENST00000561940 DMAP1Q9NPF5 467 aaPredicted RBP4.09□□□□□ -1.75
SMG1-204ENST00000561940 TRBV6-6A0A0A6YYG2 114 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 IGHV3-64DA0A0J9YX35 117 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 SERTM2A0A1B0GWG4 89 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 H3BNH8 94 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 AIM2O14862 343 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 MRPS12O15235 138 aaKnown RBP4.08□□□□□ -1.76
SMG1-204ENST00000561940 NFASCO94856 1347 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 AIFM1O95831 613 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 PSG2P11465 335 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 GALP22466 123 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 DCKP27707 260 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 ATP5OP48047 213 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 SSR4P51571 173 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 KIF1AQ12756 1690 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 SMARCB1Q12824 385 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 MPPED2Q15777 294 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 ZNF658BQ4V348 819 aaPredicted RBP4.08□□□□□ -1.76
SMG1-204ENST00000561940 C1orf185Q5T7R7 199 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 TMEM220Q6QAJ8 160 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 ANKARQ7Z5J8 1434 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 CAMK2N1Q7Z7J9 78 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 OR4A4PQ8NGN8 299 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 NRGNQ92686 78 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 MCUR1Q96AQ8 359 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 ASB9Q96DX5 294 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 USP47Q96K76 1375 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 TSNARE1Q96NA8 513 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 ECSITQ9BQ95 431 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 GEMIN7Q9H840 131 aaKnown RBP4.08□□□□□ -1.76
SMG1-204ENST00000561940 KCNJ16Q9NPI9 418 aa4.08□□□□□ -1.76
SMG1-204ENST00000561940 PHRF1Q9P1Y6 1649 aaKnown RBP4.08□□□□□ -1.76
SMG1-204ENST00000561940 RABL2AQ9UBK7 228 aaPredicted RBP4.08□□□□□ -1.76
SMG1-204ENST00000561940 MRPS18BQ9Y676 258 aaKnown RBP4.08□□□□□ -1.76
SMG1-204ENST00000561940 CUL9Q8IWT3 2517 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 DENND4AQ7Z401 1863 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 PEAK1Q9H792 1746 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 KCPQ6ZWJ8 1503 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 ANKRD50Q9ULJ7 1429 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 TRBV11-1A0A0K0K1C0 115 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 PLAC8L1A1L4L8 177 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 TEX46H3BTG2 121 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 CHST1O43916 411 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 C6orf47O95873 294 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 SERPINA5P05154 406 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 FGF4P08620 206 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 HRH1P35367 487 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 CXCL5P42830 114 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 TNNT2P45379 298 aaPredicted RBP4.07□□□□□ -1.76
SMG1-204ENST00000561940 SLC25A11Q02978 314 aaKnown RBP4.07□□□□□ -1.76
SMG1-204ENST00000561940 PON3Q15166 354 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 ZSCAN26Q16670 478 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 TMEM183BQ1AE95 376 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 COA6Q5JTJ3 125 aaKnown RBP4.07□□□□□ -1.76
SMG1-204ENST00000561940 C9orf135Q5VTT2 229 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 REEP3Q6NUK4 255 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 Q6ZVH6 145 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 SLC16A14Q7RTX9 510 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 TMEM135Q86UB9 458 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 TMEM183AQ8IXX5 376 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 STPG2Q8N412 459 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 OR52K2Q8NGK3 314 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 ACTRT1Q8TDG2 376 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 COL24A1Q17RW2 1714 aa4.07□□□□□ -1.76
SMG1-204ENST00000561940 CICQ96RK0 1608 aaPredicted RBP4.06□□□□□ -1.76
SMG1-204ENST00000561940 EIF3AQ14152 1382 aaKnown RBP4.06□□□□□ -1.76
SMG1-204ENST00000561940 A0A0B4J2A0 478 aa4.06□□□□□ -1.76
SMG1-204ENST00000561940 GLYATL1P3A0A0U1RQE8 302 aa4.06□□□□□ -1.76
SMG1-204ENST00000561940 PRSS37A4D1T9 235 aa4.06□□□□□ -1.76
SMG1-204ENST00000561940 C11orf94C9JXX5 98 aa4.06□□□□□ -1.76
SMG1-204ENST00000561940 LAD1O00515 517 aa4.06□□□□□ -1.76
SMG1-204ENST00000561940 KMOO15229 486 aa4.06□□□□□ -1.76
SMG1-204ENST00000561940 DPM1O60762 260 aa4.06□□□□□ -1.76
SMG1-204ENST00000561940 SS18L1O75177 396 aaPredicted RBP4.06□□□□□ -1.76
SMG1-204ENST00000561940 ZNF250P15622 560 aa4.06□□□□□ -1.76
SMG1-204ENST00000561940 AK4P27144 223 aaPredicted RBP4.06□□□□□ -1.76
SMG1-204ENST00000561940 CSNK1DP48730 415 aa4.06□□□□□ -1.76
SMG1-204ENST00000561940 C21orf59P57076 290 aa4.06□□□□□ -1.76
SMG1-204ENST00000561940 RGS8P57771 180 aaPredicted RBP4.06□□□□□ -1.76
SMG1-204ENST00000561940 RAB10P61026 200 aa4.06□□□□□ -1.76
SMG1-204ENST00000561940 SLC7A9P82251 487 aa4.06□□□□□ -1.76
SMG1-204ENST00000561940 ILKQ13418 452 aa4.06□□□□□ -1.76
SMG1-204ENST00000561940 TTLL9Q3SXZ7 439 aa4.06□□□□□ -1.76
SMG1-204ENST00000561940 LYPD2Q6UXB3 125 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms