RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 OLFM3Q96PB7 478 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 SIGLEC12Q96PQ1 595 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 EBNA1BP2Q99848 306 aaKnown RBP2.84□□□□□ -1.95
HERC1-215ENST00000561436 UTP23Q9BRU9 249 aaKnown RBP2.84□□□□□ -1.95
HERC1-215ENST00000561436 NAT10Q9H0A0 1025 aaKnown RBP2.84□□□□□ -1.95
HERC1-215ENST00000561436 CLSTN2Q9H4D0 955 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 ZNF160Q9HCG1 818 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 FAM60AQ9NP50 221 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 PALMDQ9NP74 551 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 NANSQ9NR45 359 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 PNO1Q9NRX1 252 aaKnown RBP2.84□□□□□ -1.95
HERC1-215ENST00000561436 ETNK2Q9NVF9 386 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 DHCR7Q9UBM7 475 aaKnown RBP2.84□□□□□ -1.95
HERC1-215ENST00000561436 C3orf18Q9UK00 162 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 KLF13Q9Y2Y9 288 aaPredicted RBP2.84□□□□□ -1.95
HERC1-215ENST00000561436 NAALAD2Q9Y3Q0 740 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 MMP24Q9Y5R2 645 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 ALG6Q9Y672 507 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 BSNQ9UPA5 3926 aa2.84□□□□□ -1.96
HERC1-215ENST00000561436 OBSL1O75147 1896 aa2.84□□□□□ -1.96
HERC1-215ENST00000561436 TRIP11Q15643 1979 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 RALGAPA1Q6GYQ0 2036 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 KNTC1P50748 2209 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 KCNE1BA0A087WTH5 132 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 A0A1W2PNV4 684 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 SLC5A10A0PJK1 596 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 OR2AG2A6NM03 316 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 KRTAP9-6A8MVA2 160 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 B4DXG7 233 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 E9PLD3 99 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 KCNK1O00180 336 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 MAGEB3O15480 346 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 BCL2L11O43521 198 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 CTAG2O75638 210 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 DUSP14O95147 198 aaKnown RBP2.83□□□□□ -1.96
HERC1-215ENST00000561436 VENTXO95231 258 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 MBD3O95983 291 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 OPN1LWP04000 364 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 ANXA5P08758 320 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 OR56A5P0C7T3 313 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 COX6A1P12074 109 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 PRG2P13727 222 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 GABRA1P14867 456 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 RPA2P15927 270 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 ABOP16442 354 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 ZNF24P17028 368 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 CD9P21926 228 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 CALB2P22676 271 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 GATA2P23769 480 aaPredicted RBP2.83□□□□□ -1.96
HERC1-215ENST00000561436 KDELR1P24390 212 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 HNRNPH3P31942 346 aaKnown RBP2.83□□□□□ -1.96
HERC1-215ENST00000561436 SLC26A3P40879 764 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 EFNA3P52797 238 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 SKP1P63208 163 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 XIAPP98170 497 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 MYL5Q02045 173 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 PAX2Q02962 417 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 GBE1Q04446 702 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 TFF3Q07654 80 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 SNTB2Q13425 540 aaKnown RBP2.83□□□□□ -1.96
HERC1-215ENST00000561436 ASAH1Q13510 395 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 PRPSAP1Q14558 356 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 ARHGAP19Q14CB8 494 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 GSG1Q2KHT4 349 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 FBXL19-AS1Q494R0 122 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 GLYR1Q49A26 553 aaPredicted RBP2.83□□□□□ -1.96
HERC1-215ENST00000561436 FILIP1LQ4L180 1135 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 LRRC23Q53EV4 343 aaPredicted RBP2.83□□□□□ -1.96
HERC1-215ENST00000561436 PAGE2BQ5JRK9 111 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 CFAP157Q5JU67 520 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 SLC25A25Q6KCM7 469 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 ZNF774Q6NX45 483 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 KDELC1Q6UW63 502 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 CCBE1Q6UXH8 406 aaPredicted RBP2.83□□□□□ -1.96
HERC1-215ENST00000561436 FAM151BQ6UXP7 276 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 STAC2Q6ZMT1 411 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 H2AFVQ71UI9 128 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 COX15Q7KZN9 410 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 LRRC6Q86X45 466 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 ZDHHC21Q8IVQ6 265 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 CSNK1A1LQ8N752 337 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 PQLC3Q8N755 202 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 MDS2Q8NDY4 140 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 STXBP6Q8NFX7 210 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 AENQ8WTP8 325 aaKnown RBP2.83□□□□□ -1.96
HERC1-215ENST00000561436 ASZ1Q8WWH4 475 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 TRUB1Q8WWH5 349 aaKnown RBP2.83□□□□□ -1.96
HERC1-215ENST00000561436 CTNNBL1Q8WYA6 563 aaPredicted RBP2.83□□□□□ -1.96
HERC1-215ENST00000561436 RAD51AP1Q96B01 352 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 HAUS1Q96CS2 278 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 TRIM44Q96DX7 344 aaPredicted RBP2.83□□□□□ -1.96
HERC1-215ENST00000561436 RMND5BQ96G75 393 aaPredicted RBP2.83□□□□□ -1.96
HERC1-215ENST00000561436 C4orf36Q96KX1 117 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 CCT8L2Q96SF2 557 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 TXN2Q99757 166 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 SELENOSQ9BQE4 189 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 ALG12Q9BV10 488 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 HAUS4Q9H6D7 363 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 ASB8Q9H765 288 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 UGT1A7Q9HAW7 530 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms