RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 C1orf50Q9BV19 199 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 CHID1Q9BWS9 393 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 SPATA9Q9BWV2 254 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 NPFFR1Q9GZQ6 430 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 SLC38A1Q9H2H9 487 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 MMADHCQ9H3L0 296 aaPredicted RBP7.86□□□□□ -1.15
HERC1-210ENST00000560897 ERVK-18Q9QC07 812 aa7.86□□□□□ -1.15
HERC1-210ENST00000560897 MARCOQ9UEW3 520 aaPredicted RBP7.86□□□□□ -1.15
HERC1-210ENST00000560897 STAB2Q8WWQ8 2551 aa7.85□□□□□ -1.15
HERC1-210ENST00000560897 RBMY1BA6NDE4 496 aaKnown RBP7.85□□□□□ -1.15
HERC1-210ENST00000560897 RBMY1EA6NEQ0 496 aaKnown RBP7.85□□□□□ -1.15
HERC1-210ENST00000560897 MS4A18H0YCH9 400 aa7.85□□□□□ -1.15
HERC1-210ENST00000560897 FBP2O00757 339 aa7.85□□□□□ -1.15
HERC1-210ENST00000560897 CPSF4O95639 269 aaKnown RBP7.85□□□□□ -1.15
HERC1-210ENST00000560897 OPN1SWP03999 348 aa7.85□□□□□ -1.15
HERC1-210ENST00000560897 FGF4P08620 206 aa7.85□□□□□ -1.15
HERC1-210ENST00000560897 RBMY1DP0C7P1 496 aaKnown RBP7.85□□□□□ -1.15
HERC1-210ENST00000560897 RPS4Y1P22090 263 aaKnown RBP7.85□□□□□ -1.15
HERC1-210ENST00000560897 SLC6A2P23975 617 aa7.85□□□□□ -1.15
HERC1-210ENST00000560897 RPL4P36578 427 aaKnown RBP7.85□□□□□ -1.15
HERC1-210ENST00000560897 MDH1P40925 334 aaKnown RBP7.85□□□□□ -1.15
HERC1-210ENST00000560897 SRP9P49458 86 aaKnown RBP7.85□□□□□ -1.15
HERC1-210ENST00000560897 ARF6P62330 175 aa7.85□□□□□ -1.15
HERC1-210ENST00000560897 SYPL1Q16563 259 aa7.85□□□□□ -1.15
HERC1-210ENST00000560897 MS4A18Q3C1V0 323 aa7.85□□□□□ -1.15
HERC1-210ENST00000560897 ZNF836Q6ZNA1 936 aa7.85□□□□□ -1.15
HERC1-210ENST00000560897 RNF165Q6ZSG1 346 aa7.85□□□□□ -1.15
HERC1-210ENST00000560897 CPLX4Q7Z7G2 160 aa7.85□□□□□ -1.15
HERC1-210ENST00000560897 CALHM3Q86XJ0 350 aa7.85□□□□□ -1.15
HERC1-210ENST00000560897 C10orf53Q8N6V4 93 aa7.85□□□□□ -1.15
HERC1-210ENST00000560897 FNDC5Q8NAU1 212 aa7.85□□□□□ -1.15
HERC1-210ENST00000560897 PLPP7Q8NBV4 271 aa7.85□□□□□ -1.15
HERC1-210ENST00000560897 SDR9C7Q8NEX9 313 aa7.85□□□□□ -1.15
HERC1-210ENST00000560897 OR52P1PQ8NH57 321 aa7.85□□□□□ -1.15
HERC1-210ENST00000560897 TMEM54Q969K7 222 aa7.85□□□□□ -1.15
HERC1-210ENST00000560897 ZNF566Q969W8 418 aa7.85□□□□□ -1.15
HERC1-210ENST00000560897 EPYCQ99645 322 aa7.85□□□□□ -1.15
HERC1-210ENST00000560897 NSRP1Q9H0G5 558 aaKnown RBP7.85□□□□□ -1.15
HERC1-210ENST00000560897 FAM234AQ9H0X4 552 aa7.85□□□□□ -1.15
HERC1-210ENST00000560897 SEMA6AQ9H2E6 1030 aa7.85□□□□□ -1.15
HERC1-210ENST00000560897 TNFRSF12AQ9NP84 129 aa7.85□□□□□ -1.15
HERC1-210ENST00000560897 ZMAT5Q9UDW3 170 aaKnown RBP7.85□□□□□ -1.15
HERC1-210ENST00000560897 DNAH7Q8WXX0 4024 aa7.85□□□□□ -1.15
HERC1-210ENST00000560897 A0A1B0GVI7 797 aa7.84□□□□□ -1.15
HERC1-210ENST00000560897 A0A1W2PRX2 142 aa7.84□□□□□ -1.15
HERC1-210ENST00000560897 HMGN4O00479 90 aa7.84□□□□□ -1.15
HERC1-210ENST00000560897 RNASET2O00584 256 aaKnown RBP7.84□□□□□ -1.15
HERC1-210ENST00000560897 ITM2AO43736 263 aa7.84□□□□□ -1.15
HERC1-210ENST00000560897 PEX11AO75192 247 aa7.84□□□□□ -1.15
HERC1-210ENST00000560897 OR6A2O95222 327 aa7.84□□□□□ -1.15
HERC1-210ENST00000560897 CHRNGP07510 517 aa7.84□□□□□ -1.15
HERC1-210ENST00000560897 GUCY1A3Q02108 690 aa7.84□□□□□ -1.15
HERC1-210ENST00000560897 EGFEM1PQ0D2K5 195 aa7.84□□□□□ -1.15
HERC1-210ENST00000560897 PSG7Q13046 419 aa7.84□□□□□ -1.15
HERC1-210ENST00000560897 MAD2L1Q13257 205 aaPredicted RBP7.84□□□□□ -1.15
HERC1-210ENST00000560897 KCNJ8Q15842 424 aa7.84□□□□□ -1.15
HERC1-210ENST00000560897 PDCD4Q53EL6 469 aaKnown RBP7.84□□□□□ -1.15
HERC1-210ENST00000560897 OR4F3Q6IEY1 312 aa7.84□□□□□ -1.15
HERC1-210ENST00000560897 VMO1Q7Z5L0 202 aa7.84□□□□□ -1.15
HERC1-210ENST00000560897 PXKQ7Z7A4 578 aa7.84□□□□□ -1.15
HERC1-210ENST00000560897 ALDH16A1Q8IZ83 802 aa7.84□□□□□ -1.15
HERC1-210ENST00000560897 NPEPL1Q8NDH3 523 aa7.84□□□□□ -1.15
HERC1-210ENST00000560897 TWIST2Q8WVJ9 160 aa7.84□□□□□ -1.15
HERC1-210ENST00000560897 C10orf82Q8WW14 230 aa7.84□□□□□ -1.15
HERC1-210ENST00000560897 TUBGCP3Q96CW5 907 aa7.84□□□□□ -1.15
HERC1-210ENST00000560897 POM121L2Q96KW2 1035 aa7.84□□□□□ -1.15
HERC1-210ENST00000560897 PPP1R36Q96LQ0 422 aa7.84□□□□□ -1.15
HERC1-210ENST00000560897 SLC35A5Q9BS91 424 aa7.84□□□□□ -1.15
HERC1-210ENST00000560897 DCTN5Q9BTE1 182 aa7.84□□□□□ -1.15
HERC1-210ENST00000560897 SIRPDQ9H106 197 aa7.84□□□□□ -1.15
HERC1-210ENST00000560897 SELENONQ9NZV5 590 aa7.84□□□□□ -1.15
HERC1-210ENST00000560897 ELOVL7A1L3X0 281 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 C11orf98E9PRG8 122 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 H3BUX3 64 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 HDAC3O15379 428 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 ANGPTL7O43827 346 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 FSTL3O95633 263 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 ABHD16AO95870 558 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 QDPRP09417 244 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 PRG2P13727 222 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 CLRN1P58418 232 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 GNGT1P63211 74 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 TXNL4AP83876 142 aaKnown RBP7.83□□□□□ -1.16
HERC1-210ENST00000560897 LY6EQ16553 131 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 ARSJQ5FYB0 599 aaPredicted RBP7.83□□□□□ -1.16
HERC1-210ENST00000560897 RNF220Q5VTB9 566 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 IL23RQ5VWK5 629 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 LYPD2Q6UXB3 125 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 WDR88Q6ZMY6 472 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 SERPINA11Q86U17 422 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 MOGAT3Q86VF5 341 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 ANKRD46Q86W74 232 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 LRRC34Q8IZ02 419 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 ZNF781Q8N8C0 355 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 OR6X1Q8NH79 312 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 PPP1R35Q8TAP8 253 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 RBMXL1Q96E39 390 aaKnown RBP7.83□□□□□ -1.16
HERC1-210ENST00000560897 MAP6Q96JE9 813 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 C7orf26Q96N11 449 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 NKX3-1Q99801 234 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms