RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.14□□□□□ -0.63
CTDSPL2-209ENST00000560620 ZNF718Q3SXZ3 478 aa11.14□□□□□ -0.63
CTDSPL2-209ENST00000560620 TMEM154Q6P9G4 183 aa11.14□□□□□ -0.63
CTDSPL2-209ENST00000560620 AQP12AQ8IXF9 295 aa11.14□□□□□ -0.63
CTDSPL2-209ENST00000560620 ZNF101Q8IZC7 436 aa11.14□□□□□ -0.63
CTDSPL2-209ENST00000560620 OR4C15Q8NGM1 316 aa11.14□□□□□ -0.63
CTDSPL2-209ENST00000560620 ABHD4Q8TB40 342 aa11.14□□□□□ -0.63
CTDSPL2-209ENST00000560620 CANT1Q8WVQ1 401 aa11.14□□□□□ -0.63
CTDSPL2-209ENST00000560620 SLC7A6OSQ96CW6 309 aaPredicted RBP11.14□□□□□ -0.63
CTDSPL2-209ENST00000560620 WACQ9BTA9 647 aa11.14□□□□□ -0.63
CTDSPL2-209ENST00000560620 FN3KQ9H479 309 aa11.14□□□□□ -0.63
CTDSPL2-209ENST00000560620 ELOVL3Q9HB03 270 aa11.14□□□□□ -0.63
CTDSPL2-209ENST00000560620 NDRG4Q9ULP0 352 aaKnown RBP11.14□□□□□ -0.63
CTDSPL2-209ENST00000560620 NDUFS8O00217 210 aa11.13□□□□□ -0.63
CTDSPL2-209ENST00000560620 DCTN6O00399 190 aa11.13□□□□□ -0.63
CTDSPL2-209ENST00000560620 TPD52L2O43399 206 aaKnown RBP11.13□□□□□ -0.63
CTDSPL2-209ENST00000560620 SOX14O95416 240 aa11.13□□□□□ -0.63
CTDSPL2-209ENST00000560620 GSTM3P21266 225 aa11.13□□□□□ -0.63
CTDSPL2-209ENST00000560620 USF1P22415 310 aaPredicted RBP11.13□□□□□ -0.63
CTDSPL2-209ENST00000560620 RASSF2P50749 326 aa11.13□□□□□ -0.63
CTDSPL2-209ENST00000560620 LSM6P62312 80 aaKnown RBP11.13□□□□□ -0.63
CTDSPL2-209ENST00000560620 MOGQ16653 247 aa11.13□□□□□ -0.63
CTDSPL2-209ENST00000560620 MEP1BQ16820 701 aa11.13□□□□□ -0.63
CTDSPL2-209ENST00000560620 PGM2L1Q6PCE3 622 aa11.13□□□□□ -0.63
CTDSPL2-209ENST00000560620 RASSF6Q6ZTQ3 369 aa11.13□□□□□ -0.63
CTDSPL2-209ENST00000560620 ADGRG5Q8IZF4 528 aa11.13□□□□□ -0.63
CTDSPL2-209ENST00000560620 OR6V1Q8N148 313 aa11.13□□□□□ -0.63
CTDSPL2-209ENST00000560620 ZNF540Q8NDQ6 660 aa11.13□□□□□ -0.63
CTDSPL2-209ENST00000560620 OR10G2Q8NGC3 310 aa11.13□□□□□ -0.63
CTDSPL2-209ENST00000560620 UBASH3BQ8TF42 649 aa11.13□□□□□ -0.63
CTDSPL2-209ENST00000560620 C4orf45Q96LM5 186 aa11.13□□□□□ -0.63
CTDSPL2-209ENST00000560620 CDADC1Q9BWV3 514 aa11.13□□□□□ -0.63
CTDSPL2-209ENST00000560620 YY1AP1Q9H869 796 aa11.13□□□□□ -0.63
CTDSPL2-209ENST00000560620 VNN3Q9NY84 501 aa11.13□□□□□ -0.63
CTDSPL2-209ENST00000560620 SLCO1C1Q9NYB5 712 aa11.13□□□□□ -0.63
CTDSPL2-209ENST00000560620 B9D1Q9UPM9 204 aa11.13□□□□□ -0.63
CTDSPL2-209ENST00000560620 GRIP1Q9Y3R0 1128 aa11.13□□□□□ -0.63
CTDSPL2-209ENST00000560620 CR1P17927 2039 aa11.13□□□□□ -0.63
CTDSPL2-209ENST00000560620 SETD2Q9BYW2 2564 aaPredicted RBP11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 PLSCR5A0PG75 271 aa11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 INAFM1C9JVW0 142 aa11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 LYNX1G3V0Z9 82 aa11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 H3BN98 237 aa11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 RER1O15258 196 aa11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 LYNX1P0DP58 116 aa11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 ZNF250P15622 560 aa11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 WNT5AP41221 380 aa11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 NR4A2P43354 598 aa11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 PPP1CBP62140 327 aa11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 DBPQ10586 325 aaPredicted RBP11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 ZNF770Q6IQ21 691 aaPredicted RBP11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 VASH1Q7L8A9 365 aaPredicted RBP11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 CYB561A3Q8NBI2 242 aa11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 PROKR2Q8NFJ6 384 aa11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 OR2AJ1Q8NGZ0 328 aa11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 SLC25A40Q8TBP6 338 aa11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 GIPC3Q8TF64 312 aa11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 TSSK6Q9BXA6 273 aa11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 PLA2G12AQ9BZM1 189 aa11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 OR2J1Q9GZK6 312 aa11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 BPESC1Q9GZL8 116 aa11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 HINT3Q9NQE9 182 aaKnown RBP11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 YAE1D1Q9NRH1 226 aa11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 IL20Q9NYY1 176 aa11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 POMPQ9Y244 141 aa11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 C2CD3Q4AC94 2353 aa11.12□□□□□ -0.63
CTDSPL2-209ENST00000560620 IGLV1-36A0A0B4J1U3 117 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 OR6C68A6NDL8 312 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 BHLHE40O14503 412 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 GSC2O15499 205 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 NGFP01138 241 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 COX5BP10606 129 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 HOXB6P17509 224 aaKnown RBP11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 CCL8P80075 99 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 CBX1P83916 185 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 TEKQ02763 1124 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 LOXL1Q08397 574 aaPredicted RBP11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 BNIP1Q12981 228 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 TMEM249Q2WGJ8 235 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 SLC36A3Q495N2 470 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 CORO6Q6QEF8 472 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 RFPL4BQ6ZWI9 263 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 LINC00346Q8IVM7 164 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 C1orf174Q8IYL3 243 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 ZNF786Q8N393 782 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 GJC3Q8NFK1 279 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 OR2T33Q8NG76 320 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 OR8D4Q8NGM9 314 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 TEX47Q8TBZ9 253 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 IPCEF1Q8WWN9 437 aaPredicted RBP11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 SLC7A6Q92536 515 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 OTULINQ96BN8 352 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 SNX18Q96RF0 628 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 FEVQ99581 238 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 RACGAP1Q9H0H5 632 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 ZNF556Q9HAH1 456 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 DECR2Q9NUI1 292 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 ARMC1Q9NVT9 282 aa11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 PDP1Q9P0J1 537 aaPredicted RBP11.11□□□□□ -0.63
CTDSPL2-209ENST00000560620 IGLV3-9A0A075B6K5 115 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms