RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 NRIP2Q9BQI9 281 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 CALN1Q9BXU9 219 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 DEFB127Q9H1M4 99 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 NEUROG2Q9H2A3 272 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 UBE2ZQ9H832 354 aaPredicted RBP1.68□□□□□ -2.14
GABPB1-209ENST00000559100 UGT1A7Q9HAW7 530 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 UGT1A8Q9HAW9 530 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 TMEM9BQ9NQ34 198 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 RPS10P5Q9NQ39 176 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 SLC7A10Q9NS82 523 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 FAM49BQ9NUQ9 324 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 SLC25A37Q9NYZ2 338 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 CLCF1Q9UBD9 225 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 ZMAT5Q9UDW3 170 aaKnown RBP1.68□□□□□ -2.14
GABPB1-209ENST00000559100 RCL1Q9Y2P8 373 aaKnown RBP1.68□□□□□ -2.14
GABPB1-209ENST00000559100 MRPS18BQ9Y676 258 aaKnown RBP1.68□□□□□ -2.14
GABPB1-209ENST00000559100 THSD7BQ9C0I4 1608 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 PLEKHG1Q9ULL1 1385 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 NEURL4Q96JN8 1562 aa1.68□□□□□ -2.14
GABPB1-209ENST00000559100 NFASCO94856 1347 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 MAPK8IP3Q9UPT6 1336 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 IGLV3-10A0A075B6K4 115 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 A0A1W2PRF3 423 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 A0A1W2PRM7 423 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 PSMB11A5LHX3 300 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 E7ENQ6 273 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 K7ERQ8 282 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 GABRPO00591 440 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 NME4O00746 187 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 ZBTB5O15062 677 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 POLR1CO15160 346 aaPredicted RBP1.67□□□□□ -2.14
GABPB1-209ENST00000559100 HDAC3O15379 428 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 EMC8O43402 210 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 RAB3DO95716 219 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 SNAI1O95863 264 aaPredicted RBP1.67□□□□□ -2.14
GABPB1-209ENST00000559100 C6orf47O95873 294 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 INSP01308 110 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 IVLP07476 585 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 CT45A6P0DMU7 189 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 CT45A5P0DMU8 189 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 CT45A7P0DMV0 189 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 OR5H8P0DN80 308 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 FUT3P21217 361 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 GPX4P36969 197 aaPredicted RBP1.67□□□□□ -2.14
GABPB1-209ENST00000559100 CFHR2P36980 270 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 CEACAM6P40199 344 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 NBL1P41271 181 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 CSNK1DP48730 415 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 CYB561P49447 251 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 SERPINB8P50452 374 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 RND2P52198 227 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 FGF8P55075 233 aaPredicted RBP1.67□□□□□ -2.14
GABPB1-209ENST00000559100 MXD1Q05195 221 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 SLAQ13239 276 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 UNC119Q13432 240 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 TFDP2Q14188 446 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 GPNMBQ14956 572 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 ZNF726P1Q15940 193 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 SGCAQ16586 387 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 GUCA2BQ16661 112 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 TTLL9Q3SXZ7 439 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 PIGGQ5H8A4 983 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 CT45A1Q5HYN5 189 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 C9orf129Q5T035 196 aaKnown RBP1.67□□□□□ -2.14
GABPB1-209ENST00000559100 THEM4Q5T1C6 240 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 UTF1Q5T230 341 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 THOC7Q6I9Y2 204 aaKnown RBP1.67□□□□□ -2.14
GABPB1-209ENST00000559100 RWDD4Q6NW29 188 aaKnown RBP1.67□□□□□ -2.14
GABPB1-209ENST00000559100 ZNF493Q6ZR52 646 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 MBOAT2Q6ZWT7 520 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 ABHD13Q7L211 337 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 STRADAQ7RTN6 431 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 HORMAD1Q86X24 394 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 PRSS58Q8IYP2 241 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 SYCE1Q8N0S2 351 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 KIF2BQ8N4N8 673 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 CHST4Q8NCG5 386 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 DUSP18Q8NEJ0 188 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 OR4D6Q8NGJ1 314 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 OR52E2Q8NGJ4 325 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 CT45A3Q8NHU0 189 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 ITFG1Q8TB96 612 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 RDH5Q92781 318 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 TOP1MTQ969P6 601 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 ANKRD9Q96BM1 317 aaPredicted RBP1.67□□□□□ -2.14
GABPB1-209ENST00000559100 AURKBQ96GD4 344 aaPredicted RBP1.67□□□□□ -2.14
GABPB1-209ENST00000559100 ATP6V1G3Q96LB4 118 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 GLT1D1Q96MS3 346 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 FOXN4Q96NZ1 517 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 SCGB3A2Q96PL1 93 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 TSSK3Q96PN8 268 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 PLEKHF1Q96S99 279 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 HDHD3Q9BSH5 251 aaPredicted RBP1.67□□□□□ -2.14
GABPB1-209ENST00000559100 HINT2Q9BX68 163 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 PRRG3Q9BZD7 231 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 DEFB129Q9H1M3 183 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 NXF3Q9H4D5 531 aaKnown RBP1.67□□□□□ -2.14
GABPB1-209ENST00000559100 NANOGQ9H9S0 305 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 EDA2RQ9HAV5 297 aa1.67□□□□□ -2.14
GABPB1-209ENST00000559100 VCX3AQ9NNX9 186 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms