RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 WIF1Q9Y5W5 379 aa7.45□□□□□ -1.22
SPG11-209ENST00000558253 TRAV8-7A0A075B6U6 113 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 A0A0B4J203 849 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.44□□□□□ -1.22
SPG11-209ENST00000558253 A0A1B0GVC2 190 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 LOC390937A0A1W2PQ73 354 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 UBE2QL1A1L167 161 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 METTL21EPA6NDL7 271 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 A6NIN4 97 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 PSMD9O00233 223 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 FABP7O15540 132 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 SIGLEC6O43699 453 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 CREBL2O60519 120 aaPredicted RBP7.44□□□□□ -1.22
SPG11-209ENST00000558253 SRSF10O75494 262 aaKnown RBP7.44□□□□□ -1.22
SPG11-209ENST00000558253 CTAG2O75638 210 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 TSPAN9O75954 239 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 RGS11O94810 467 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 VAMP5O95183 116 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 IGHG1P01857 330 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 MT-ND4P03905 459 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 LPLP06858 475 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 TPOP07202 933 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 GIPP09681 153 aaPredicted RBP7.44□□□□□ -1.22
SPG11-209ENST00000558253 H2BFMP0C1H6 154 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 AKAIN1P0CW23 69 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 FOSL2P15408 326 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 CTRB1P17538 263 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 HTR2CP28335 458 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 LAP3P28838 519 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 HSD11B1P28845 292 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 OR3A3P47888 321 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 TAS2R19P59542 299 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 RAP2BP61225 183 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 BAMBIQ13145 260 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 ZMYND11Q15326 602 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 OR7A5Q15622 319 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 MPPED2Q15777 294 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 HLA-BQ31612 363 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 BTBD16Q32M84 506 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 C2orf76Q3KRA6 126 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 ESCO2Q56NI9 601 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 CTRB2Q6GPI1 263 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 GUSBP11Q6P575 273 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 GLDNQ6ZMI3 551 aaPredicted RBP7.44□□□□□ -1.22
SPG11-209ENST00000558253 NDUFAF7Q7L592 441 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 PRSS45Q7RTY3 260 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 SERPINA12Q8IW75 414 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 UEVLDQ8IX04 471 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 TMEM229BQ8NBD8 167 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 GALNT11Q8NCW6 608 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 AGBL5Q8NDL9 886 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 OR11G2Q8NGC1 345 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 OR6N1Q8NGY5 312 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 OR6X1Q8NH79 312 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 M1APQ8TC57 530 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 ST7LQ8TDW4 575 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 CCDC107Q8WV48 283 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 GIMAP1Q8WWP7 306 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 INTS12Q96CB8 462 aaKnown RBP7.44□□□□□ -1.22
SPG11-209ENST00000558253 SPACA9Q96E40 222 aaPredicted RBP7.44□□□□□ -1.22
SPG11-209ENST00000558253 SLC25A44Q96H78 314 aaPredicted RBP7.44□□□□□ -1.22
SPG11-209ENST00000558253 CCDC74BQ96LY2 380 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 OXGR1Q96P68 337 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 SORCS2Q96PQ0 1159 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 SLC25A21Q9BQT8 299 aaPredicted RBP7.44□□□□□ -1.22
SPG11-209ENST00000558253 MRPL13Q9BYD1 178 aaKnown RBP7.44□□□□□ -1.22
SPG11-209ENST00000558253 ZNF436Q9C0F3 470 aaPredicted RBP7.44□□□□□ -1.22
SPG11-209ENST00000558253 OR11A1Q9GZK7 315 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 ZNF700Q9H0M5 742 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 C1orf198Q9H425 327 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 MYOZ1Q9NP98 299 aaPredicted RBP7.44□□□□□ -1.22
SPG11-209ENST00000558253 PRMT8Q9NR22 394 aaPredicted RBP7.44□□□□□ -1.22
SPG11-209ENST00000558253 B3GNT2Q9NY97 397 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 RAB22AQ9UL26 194 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 COA3Q9Y2R0 106 aaPredicted RBP7.44□□□□□ -1.22
SPG11-209ENST00000558253 HSPB11Q9Y547 144 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 THADAQ6YHU6 1953 aa7.44□□□□□ -1.22
SPG11-209ENST00000558253 LY6G6EA0A0G2JKS1 128 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 TMEM269A0A1B0GVZ9 245 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 A0A1W2PQM1 296 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 TUBAL3A6NHL2 446 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 ZSCAN5BA6NJL1 495 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 TMEM200CA6NKL6 621 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 C4orf47A7E2U8 309 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 C9J4A7 227 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 EFSO43281 561 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 DNPH1O43598 174 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 EIF1BO60739 113 aaKnown RBP7.43□□□□□ -1.22
SPG11-209ENST00000558253 NOS1APO75052 506 aaPredicted RBP7.43□□□□□ -1.22
SPG11-209ENST00000558253 PMS2P2O95744 297 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 CER1O95813 267 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 PLGP00747 810 aaPredicted RBP7.43□□□□□ -1.22
SPG11-209ENST00000558253 IFNA7P01567 189 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 APOC1P02654 83 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 MAS1P04201 325 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 ICAM2P13598 275 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 TBPP20226 339 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 MPZP25189 248 aa7.43□□□□□ -1.22
SPG11-209ENST00000558253 GUCA1AP43080 201 aaPredicted RBP7.43□□□□□ -1.22
SPG11-209ENST00000558253 POU3F4P49335 361 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms