RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 IRF2P14316 349 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 ACADSP16219 412 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 ZNF32P17041 273 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 KITLGP21583 273 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 HTR2AP28223 471 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 IL12AP29459 219 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 CFHR2P36980 270 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 TGFBR2P37173 567 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 PITPNBP48739 271 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 SRP9P49458 86 aaKnown RBP4.31□□□□□ -1.72
SPG11-208ENST00000558155 NPY4RP50391 375 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 MVDP53602 400 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 CDH12P55289 794 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 RGS8P57771 180 aaPredicted RBP4.31□□□□□ -1.72
SPG11-208ENST00000558155 ABCE1P61221 599 aaKnown RBP4.31□□□□□ -1.72
SPG11-208ENST00000558155 MRPS34P82930 218 aaKnown RBP4.31□□□□□ -1.72
SPG11-208ENST00000558155 PSG4Q00888 419 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 EMX1Q04741 257 aaPredicted RBP4.31□□□□□ -1.72
SPG11-208ENST00000558155 FADDQ13158 208 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 MELKQ14680 651 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 HERPUD1Q15011 391 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 HIST3H3Q16695 136 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 TMEM255AQ5JRV8 349 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 C10orf128Q5T292 105 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 FAM27BQ5VT28 67 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 HHATQ5VTY9 493 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 WDR25Q64LD2 544 aaPredicted RBP4.31□□□□□ -1.72
SPG11-208ENST00000558155 DHRS7BQ6IAN0 325 aaPredicted RBP4.31□□□□□ -1.72
SPG11-208ENST00000558155 OGFOD2Q6N063 350 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 TTC33Q6PID6 262 aaPredicted RBP4.31□□□□□ -1.72
SPG11-208ENST00000558155 DHRS4L2Q6PKH6 230 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 HDDC2Q7Z4H3 204 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 RANBP3LQ86VV4 465 aaPredicted RBP4.31□□□□□ -1.72
SPG11-208ENST00000558155 C1orf87Q8N0U7 546 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 GALNT4Q8N4A0 578 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 ZNF781Q8N8C0 355 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 SCCPDHQ8NBX0 429 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 NPEPL1Q8NDH3 523 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 OR13G1Q8NGZ3 307 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 AKR7LQ8NHP1 331 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 EPS8L3Q8TE67 593 aaKnown RBP4.31□□□□□ -1.72
SPG11-208ENST00000558155 DACT3Q96B18 629 aaPredicted RBP4.31□□□□□ -1.72
SPG11-208ENST00000558155 HAVCR1Q96D42 359 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 CMBLQ96DG6 245 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 ITCHQ96J02 903 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 TEX37Q96LM6 180 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 COG8Q96MW5 612 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 OR2V2Q96R30 315 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 ZNF347Q96SE7 839 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 TMEM246Q9BRR3 403 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 MRPL13Q9BYD1 178 aaKnown RBP4.31□□□□□ -1.72
SPG11-208ENST00000558155 GRPEL1Q9HAV7 217 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 GCM1Q9NP62 436 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 TBCCD1Q9NVR7 557 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 CAB39Q9Y376 341 aaPredicted RBP4.31□□□□□ -1.72
SPG11-208ENST00000558155 RAP2CQ9Y3L5 183 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 IGHV1-69DA0A0B4J2H0 117 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 GMNCA6NCL1 334 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 ANKRD61A6NGH8 418 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 H0YL77 283 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 CLIC1O00299 241 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 ITM2AO43736 263 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 TPST1O60507 370 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 ICMTO60725 284 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 FMO6PO60774 539 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 SERPINB7O75635 380 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 TRMUO75648 421 aaKnown RBP4.3□□□□□ -1.72
SPG11-208ENST00000558155 ABHD16AO95870 558 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 CYB5R3P00387 301 aaPredicted RBP4.3□□□□□ -1.72
SPG11-208ENST00000558155 IGHV1-69P01742 117 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 IGHV4-59P01825 116 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 SERPINE1P05121 402 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 SFTPBP07988 381 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 THRBP10828 461 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 UMPSP11172 480 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 CDAP32320 146 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 RBMXP38159 391 aaKnown RBP4.3□□□□□ -1.72
SPG11-208ENST00000558155 SLC1A6P48664 564 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 DAP3P51398 398 aaKnown RBP4.3□□□□□ -1.72
SPG11-208ENST00000558155 ZNF133P52736 654 aaPredicted RBP4.3□□□□□ -1.72
SPG11-208ENST00000558155 GYS2P54840 703 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 ERVK-25P63136 954 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 CDK6Q00534 326 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 GUCY1A3Q02108 690 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 EGR3Q06889 387 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 HNRNPA0Q13151 305 aaKnown RBP4.3□□□□□ -1.72
SPG11-208ENST00000558155 RGNQ15493 299 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 KCNJ8Q15842 424 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 ZNF74Q16587 644 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 ZNF181Q2M3W8 571 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 ZNF404Q494X3 552 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 RUNDC3AQ59EK9 446 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 OXLD1Q5BKU9 147 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 METTL11BQ5VVY1 283 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 REEP3Q6NUK4 255 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 ZNF613Q6PF04 617 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 C11orf88Q6PI97 169 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 Q6ZR03 302 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 DCDC5Q6ZRR9 648 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 MSANTD1Q6ZTZ1 278 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms