RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 HPNP05981 417 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 FOLR1P15328 257 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 KDELR2P33947 212 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 MAS1LP35410 378 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 RBM34P42696 430 aaKnown RBP2.95□□□□□ -1.94
TDP1-217ENST00000557782 DLX1P56177 255 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 DSTNP60981 165 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 NUTF2P61970 127 aaKnown RBP2.95□□□□□ -1.94
TDP1-217ENST00000557782 PAFAH1B2P68402 229 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 CD300CQ08708 224 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 ELAVL2Q12926 359 aaKnown RBP2.95□□□□□ -1.94
TDP1-217ENST00000557782 RUNX3Q13761 415 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 DMC1Q14565 340 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 MAD2L1BPQ15013 274 aaPredicted RBP2.95□□□□□ -1.94
TDP1-217ENST00000557782 PRR4Q16378 134 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 CCNJQ5T5M9 372 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 FAM151BQ6UXP7 276 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 C12orf54Q6X4T0 127 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 ZNF620Q6ZNG0 422 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 USP43Q70EL4 1123 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 SSX7Q7RTT5 188 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 LRRC6Q86X45 466 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 HIPK1Q86Z02 1210 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 C6orf223Q8N319 242 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 MREGQ8N565 214 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 TMEM252Q8N6L7 170 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 OR51A7Q8NH64 312 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 OR9G1Q8NH87 305 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 OR51E1Q8TCB6 317 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 IFT81Q8WYA0 676 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 RASL10AQ92737 203 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 ARPC1AQ92747 370 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 TMEM230Q96A57 120 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 DYNLL2Q96FJ2 89 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 B3GALT6Q96L58 329 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 PGLYRP2Q96PD5 576 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 DUX3Q96PT4 197 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 TSNAXQ99598 290 aaKnown RBP2.95□□□□□ -1.94
TDP1-217ENST00000557782 LITAFQ99732 161 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 SPZ1Q9BXG8 430 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 NSRP1Q9H0G5 558 aaKnown RBP2.95□□□□□ -1.94
TDP1-217ENST00000557782 SLC38A1Q9H2H9 487 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 PANK3Q9H999 370 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 UCK1Q9HA47 277 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 PLEKHA1Q9HB21 404 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 SDF2L1Q9HCN8 221 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 SDHAF2Q9NX18 166 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 SLC39A1Q9NY26 324 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 ASF1AQ9Y294 204 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 PPIL1Q9Y3C6 166 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 ADCY9O60503 1353 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 MAPK8IP3Q9UPT6 1336 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 TRAV39A0A0B4J263 110 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 KIR2DL5BA0A0G2JN68 375 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 KIR2DL5BA0A0G2JPC4 375 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 FABP12A6NFH5 140 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 ANKRD63C9JTQ0 380 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 SMLR1H3BR10 107 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 K7EN84 100 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 hCG_2039718K7EN88 272 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 LIN7AO14910 233 aaPredicted RBP2.94□□□□□ -1.94
TDP1-217ENST00000557782 B4GALT5O43286 388 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 ZNF253O75346 499 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 AHSA1O95433 338 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 TIMP1P01033 207 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 HOXC4P09017 264 aaPredicted RBP2.94□□□□□ -1.94
TDP1-217ENST00000557782 SLC35E2BP0CK96 405 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 PET100P0DJ07 73 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 F2RP25116 425 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 TEAD1P28347 426 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 FMO3P31513 532 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 ARL2P36404 184 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 MAGEA6P43360 314 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 PRLHRP49683 370 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 EMP2P54851 167 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 AP1S2P56377 157 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 STX17P56962 302 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 RPL31P62899 125 aaKnown RBP2.94□□□□□ -1.94
TDP1-217ENST00000557782 SEMG2Q02383 582 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 TGFBR3Q03167 851 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 MXD1Q05195 221 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 ARFRP1Q13795 201 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 TMEM30BQ3MIR4 351 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 CCDC14Q49A88 953 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 RNLSQ5VYX0 342 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 TMEM179Q6ZVK1 233 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 ZNF589Q86UQ0 364 aaPredicted RBP2.94□□□□□ -1.94
TDP1-217ENST00000557782 CBLN2Q8IUK8 224 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 CDKL3Q8IVW4 592 aaPredicted RBP2.94□□□□□ -1.94
TDP1-217ENST00000557782 C12orf56Q8IXR9 622 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 KIR2DL5AQ8N109 375 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 ZADH2Q8N4Q0 377 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 CBR4Q8N4T8 237 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 ZNF738Q8NE65 137 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 OR4F15Q8NGB8 312 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 OR6Q1Q8NGQ2 317 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 OR2L8Q8NGY9 312 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 KIR2DL5BQ8NHK3 375 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 DNASE2BQ8WZ79 361 aa2.94□□□□□ -1.94
TDP1-217ENST00000557782 ZBTB9Q96C00 473 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms