RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 PQLC3Q8N755 202 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 SPERTQ8NA61 448 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 DUSP18Q8NEJ0 188 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 OR2A1Q8NGT9 310 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 OR4S2Q8NH73 311 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 NUBPLQ8TB37 319 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 MARCH1Q8TCQ1 289 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 LKAAEAR1Q8TD35 194 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 LRRC39Q96DD0 335 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 MICU1Q9BPX6 476 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 ACTR3CQ9C0K3 210 aaPredicted RBP3.54□□□□□ -1.84
VRK1-205ENST00000555402 MTCH1Q9NZJ7 389 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 DUX4Q9UBX2 424 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 NOSIPQ9Y314 301 aaKnown RBP3.54□□□□□ -1.84
VRK1-205ENST00000555402 MEGF6O75095 1541 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 TRAV25A0A0B4J276 109 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 C11orf94C9JXX5 98 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 H7C0C1 242 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 NDUFS8O00217 210 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 NVLO15381 856 aaKnown RBP3.53□□□□□ -1.84
VRK1-205ENST00000555402 AIREO43918 545 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 ICOSLGO75144 302 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 E2F6O75461 281 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 OTCP00480 354 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 NPPAP01160 153 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 SERPINE2P07093 398 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 ADRB3P13945 408 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 MDKP21741 143 aaPredicted RBP3.53□□□□□ -1.84
VRK1-205ENST00000555402 GPX4P36969 197 aaPredicted RBP3.53□□□□□ -1.84
VRK1-205ENST00000555402 CEACAM6P40199 344 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 CDKN2BP42772 138 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 SLC1A2P43004 574 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 SP4Q02446 784 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 GGTLC2Q14390 218 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 GINS1Q14691 196 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 THEM4Q5T1C6 240 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 ZNF530Q6P9A1 599 aaPredicted RBP3.53□□□□□ -1.84
VRK1-205ENST00000555402 LYPD2Q6UXB3 125 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 STPG2Q8N412 459 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 JAGN1Q8N5M9 183 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 ZNF433Q8N7K0 673 aaPredicted RBP3.53□□□□□ -1.84
VRK1-205ENST00000555402 ZFP41Q8N8Y5 198 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 OR9G4Q8NGQ1 327 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 C19orf60Q96EN9 201 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 UCK2Q9BZX2 261 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 ZYG11BQ9C0D3 744 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 SLC7A5P2Q9GIP4 190 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 HAUS4Q9H6D7 363 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 AGPAT4Q9NRZ5 378 aa3.53□□□□□ -1.84
VRK1-205ENST00000555402 ZNF223Q9UK11 482 aaPredicted RBP3.53□□□□□ -1.84
VRK1-205ENST00000555402 KIF27Q86VH2 1401 aa3.53□□□□□ -1.85
VRK1-205ENST00000555402 SMKR1H3BMG3 65 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 M0R3G1 203 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 AKR7A2O43488 359 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 NMT2O60551 498 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 ARG1P05089 322 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 PRPS2P11908 318 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 GGT1P19440 569 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 RAB3BP20337 219 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 SLC11A1P49279 550 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 RND2P52198 227 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 ZNF136P52737 540 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 MAB21L1Q13394 359 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 POU2AF1Q16633 256 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 TMEM255AQ5JRV8 349 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 OR52W1Q6IF63 320 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 SPESP1Q6UW49 350 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 NCCRP1Q6ZVX7 275 aaPredicted RBP3.52□□□□□ -1.85
VRK1-205ENST00000555402 OR10J6PQ8NGY7 276 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 OR5K2Q8NHB8 316 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 CREB3L1Q96BA8 519 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 CEP170P1Q96L14 293 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 LINC00597Q9H2U6 94 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 IFI27L2Q9H2X8 130 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 MRPS30Q9NP92 439 aaKnown RBP3.52□□□□□ -1.85
VRK1-205ENST00000555402 TMEM9BQ9NQ34 198 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 PXMP2Q9NR77 195 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 CHRAC1Q9NRG0 131 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 AHSPQ9NZD4 102 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 WSB1Q9Y6I7 421 aa3.52□□□□□ -1.85
VRK1-205ENST00000555402 UBN2Q6ZU65 1347 aa3.51□□□□□ -1.85
VRK1-205ENST00000555402 SCAMP2O15127 329 aaKnown RBP3.51□□□□□ -1.85
VRK1-205ENST00000555402 CETN3O15182 167 aa3.51□□□□□ -1.85
VRK1-205ENST00000555402 RDH16O75452 317 aa3.51□□□□□ -1.85
VRK1-205ENST00000555402 GABARAPO95166 117 aa3.51□□□□□ -1.85
VRK1-205ENST00000555402 LSM8O95777 96 aaKnown RBP3.51□□□□□ -1.85
VRK1-205ENST00000555402 RETP07949 1114 aa3.51□□□□□ -1.85
VRK1-205ENST00000555402 UBCP0CG48 685 aaKnown RBP3.51□□□□□ -1.85
VRK1-205ENST00000555402 OR5H8P0DN80 308 aa3.51□□□□□ -1.85
VRK1-205ENST00000555402 OMGP23515 440 aa3.51□□□□□ -1.85
VRK1-205ENST00000555402 OR1E1P30953 314 aa3.51□□□□□ -1.85
VRK1-205ENST00000555402 CEACAM3P40198 252 aa3.51□□□□□ -1.85
VRK1-205ENST00000555402 VSX2P58304 361 aaPredicted RBP3.51□□□□□ -1.85
VRK1-205ENST00000555402 ITIH4Q14624 930 aa3.51□□□□□ -1.85
VRK1-205ENST00000555402 ZNF726P1Q15940 193 aa3.51□□□□□ -1.85
VRK1-205ENST00000555402 KLHL40Q2TBA0 621 aa3.51□□□□□ -1.85
VRK1-205ENST00000555402 PGGHGQ32M88 737 aa3.51□□□□□ -1.85
VRK1-205ENST00000555402 BEX5Q5H9J7 111 aa3.51□□□□□ -1.85
VRK1-205ENST00000555402 PIP5KL1Q5T9C9 394 aa3.51□□□□□ -1.85
VRK1-205ENST00000555402 PLCXD3Q63HM9 321 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms