RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 NXPE3Q969Y0 559 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 COL22A1Q8NFW1 1626 aaPredicted RBP12.75□□□□□ -0.37
VTI1B-204ENST00000554659 OLFM2O95897 454 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 OR10J4P0C629 311 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 CD46P15529 392 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 TCTE3Q8IZS6 198 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 OR1M1Q8NGA1 313 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 OPA3Q9H6K4 179 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 FGF22Q9HCT0 170 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 ABHD16AO95870 558 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 CT45A6P0DMU7 189 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 CT45A5P0DMU8 189 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 CT45A7P0DMV0 189 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 CT45A8P0DMV1 189 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 CT45A9P0DMV2 189 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 CARD18P57730 90 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 CT45A2Q5DJT8 189 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 CT45A1Q5HYN5 189 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 CMTM4Q8IZR5 234 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 OR51A2Q8NGJ7 313 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 CT45A3Q8NHU0 189 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 ERVMER34-1Q9H9K5 563 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 CSAG2Q9Y5P2 127 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 FZD6O60353 706 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 FLI1Q01543 452 aaPredicted RBP12.75□□□□□ -0.37
VTI1B-204ENST00000554659 ZNF92Q03936 586 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 RSPO2Q6UXX9 243 aaPredicted RBP12.75□□□□□ -0.37
VTI1B-204ENST00000554659 CCDC190Q86UF4 302 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 OR13C8Q8NGS7 320 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 SEH1LQ96EE3 360 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 C10orf90Q96M02 699 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 BCO1Q9HAY6 547 aa12.75□□□□□ -0.37
VTI1B-204ENST00000554659 HEYLQ9NQ87 328 aaPredicted RBP12.75□□□□□ -0.37
VTI1B-204ENST00000554659 DDX60LQ5H9U9 1706 aaKnown RBP12.74□□□□□ -0.37
VTI1B-204ENST00000554659 A0A1B0GTL3 188 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 A0A1B0GX78 115 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 ENSAO43768 121 aaKnown RBP12.74□□□□□ -0.37
VTI1B-204ENST00000554659 PTAFRP25105 342 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 S100A7P31151 101 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 TMEM81Q6P7N7 255 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 OR5M8Q8NGP6 311 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 LIPHQ8WWY8 451 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 OR6C1Q96RD1 312 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 ZNF724A8MTY0 619 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 GPR171O14626 319 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 ST8SIA3O43173 380 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 OR2C1O95371 312 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 CD1CP29017 333 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 EMP3P54852 163 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 ARL16Q0P5N6 197 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 C17orf107Q6ZR85 190 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 RHOUQ7L0Q8 258 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 BCORP1Q8N888 145 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 ZCCHC4Q9H5U6 513 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 DYNLRB1Q9NP97 96 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 HRH3Q9Y5N1 445 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 A0A087WV62 115 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 M0R082 166 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 JTBO76095 146 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 CPN1P15169 458 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 GABRA4P48169 554 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 OR13H1Q8NG92 308 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 KCNJ15Q99712 375 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 TRAPPC4Q9Y296 219 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 TRPM3Q9HCF6 1732 aaPredicted RBP12.74□□□□□ -0.37
VTI1B-204ENST00000554659 FGF17O60258 216 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 FCMRO60667 390 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 ETHE1O95571 254 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 RD3LP0DJH9 198 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 CD22P20273 847 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 EPHA2P29317 976 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 ELLP55199 621 aaPredicted RBP12.74□□□□□ -0.37
VTI1B-204ENST00000554659 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.74□□□□□ -0.37
VTI1B-204ENST00000554659 OR8G2PQ6IF36 304 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 ZNF813Q6ZN06 617 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 FAM71CQ8NEG0 241 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 SEMA6DQ8NFY4 1073 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 ATF6BQ99941 703 aa12.74□□□□□ -0.37
VTI1B-204ENST00000554659 OR6C68A6NDL8 312 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 GLSO94925 669 aaPredicted RBP12.73□□□□□ -0.37
VTI1B-204ENST00000554659 UBE2G2P60604 165 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 GRAMD2AQ8IUY3 354 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 ARIH2OSQ8N7S6 290 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 GOT1L1Q8NHS2 421 aaPredicted RBP12.73□□□□□ -0.37
VTI1B-204ENST00000554659 CMTM2Q8TAZ6 248 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 CHRNA9Q9UGM1 479 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 KIR2DS1A0A191URI9 304 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 H7BYZ3 331 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 H2AFB1P0C5Y9 115 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 SLC2A1P11166 492 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 DUSP1P28562 367 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 KIR2DS4P43632 304 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 OR10A3P58181 314 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 EXOSC2Q13868 293 aaKnown RBP12.73□□□□□ -0.37
VTI1B-204ENST00000554659 KIR2DS1Q14954 304 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 ZNF680Q8NEM1 530 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 SLC37A2Q8TED4 501 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 FAM173AQ9BQD7 235 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 RHNO1Q9BSD3 238 aa12.73□□□□□ -0.37
VTI1B-204ENST00000554659 CHST11Q9NPF2 352 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms