RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 THUMPD1Q9NXG2 353 aaKnown RBP3.52□□□□□ -1.85
USP44-208ENST00000552440 PRODH2Q9UF12 536 aa3.52□□□□□ -1.85
USP44-208ENST00000552440 PAIP2BQ9ULR5 123 aaKnown RBP3.52□□□□□ -1.85
USP44-208ENST00000552440 CEMIPQ8WUJ3 1361 aa3.52□□□□□ -1.85
USP44-208ENST00000552440 KIAA0232Q92628 1395 aa3.52□□□□□ -1.85
USP44-208ENST00000552440 PLEKHH1Q9ULM0 1364 aa3.52□□□□□ -1.85
USP44-208ENST00000552440 EFCAB5A4FU69 1503 aa3.52□□□□□ -1.85
USP44-208ENST00000552440 STK36Q9NRP7 1315 aa3.52□□□□□ -1.85
USP44-208ENST00000552440 TCOF1Q13428 1488 aaKnown RBP3.51□□□□□ -1.85
USP44-208ENST00000552440 RAPGEF2Q9Y4G8 1499 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 KIR2DL5BA0A0G2JN68 375 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 KIR2DL5BA0A0G2JPC4 375 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 KIR2DS1A0A191URI9 304 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 TMEM272A0A1B0GTI8 110 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.51□□□□□ -1.85
USP44-208ENST00000552440 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.51□□□□□ -1.85
USP44-208ENST00000552440 PRR23AA6NEV1 266 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 GLTPD2A6NH11 291 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 C21orf140B9A014 251 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 F5H5T6 163 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 K7ERI5 159 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 CCL21O00585 134 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 ADAM10O14672 748 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 NDUFB8O95169 186 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 ATP6V1G2O95670 118 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 ISG15P05161 165 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 CD36P16671 472 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 MPGP29372 298 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 IL12AP29459 219 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 SERPINB1P30740 379 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 TIMP3P35625 211 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 MAGEA12P43365 314 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 TFPI2P48307 235 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 SSR4P51571 173 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 TMEM33P57088 247 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 BRWD1-AS2P59051 145 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 PAFAH1B2P68402 229 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 FAM3AP98173 230 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 SLC39A6Q13433 755 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 KIR2DS1Q14954 304 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 PSMD5Q16401 504 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 OR10J3Q5JRS4 329 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 CPTPQ5TA50 214 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 SAXO2Q658L1 398 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 OR52E8Q6IFG1 317 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 FAM45BPQ6NSW5 357 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 FAM199XQ6PEV8 388 aaPredicted RBP3.51□□□□□ -1.85
USP44-208ENST00000552440 GFRALQ6UXV0 394 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 RBMS3Q6XE24 437 aaKnown RBP3.51□□□□□ -1.85
USP44-208ENST00000552440 FAM92BQ6ZTR7 304 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 FAM19A1Q7Z5A9 133 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 MYPOPQ86VE0 399 aaPredicted RBP3.51□□□□□ -1.85
USP44-208ENST00000552440 PLA2G4DQ86XP0 818 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 TMEM219Q86XT9 240 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 VKORC1L1Q8N0U8 176 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 PUSL1Q8N0Z8 303 aaKnown RBP3.51□□□□□ -1.85
USP44-208ENST00000552440 KIR2DL5AQ8N109 375 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 PDIK1LQ8N165 341 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.51□□□□□ -1.85
USP44-208ENST00000552440 WDR31Q8NA23 367 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 ZNF740Q8NDX6 193 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 OR2T33Q8NG76 320 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 KIR2DL5BQ8NHK3 375 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 ZNF502Q8TBZ5 544 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 MCOLN3Q8TDD5 553 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 TFB1MQ8WVM0 346 aaKnown RBP3.51□□□□□ -1.85
USP44-208ENST00000552440 TLCD1Q96CP7 247 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 ADTRPQ96IZ2 230 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 C17orf77Q96MU5 243 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 MS4A4EQ96PG1 132 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 HCAR1Q9BXC0 346 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 UBXN6Q9BZV1 441 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 FAM107BQ9H098 131 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 CAB39LQ9H9S4 337 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 ESM1Q9NQ30 184 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 XPNPEP1Q9NQW7 623 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 SPANXB1Q9NS25 103 aaPredicted RBP3.51□□□□□ -1.85
USP44-208ENST00000552440 TMEM9Q9P0T7 183 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 RSPH14Q9UHP6 348 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 ARL2BPQ9Y2Y0 163 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 ARL5AQ9Y689 179 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 ABCA9Q8IUA7 1624 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 ZMYM4Q5VZL5 1548 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 ZFYVE16Q7Z3T8 1539 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 UGGT2Q9NYU1 1516 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 FRMPD3Q5JV73 1810 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 SHANK2Q9UPX8 1470 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 KIAA0556O60303 1618 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 CAMSAP1Q5T5Y3 1602 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 SMIM28A0A1B0GU29 152 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 ZNF233A6NK53 670 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 USP27XA6NNY8 438 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 PRKNO60260 465 aaPredicted RBP3.51□□□□□ -1.85
USP44-208ENST00000552440 CDC40O60508 579 aaKnown RBP eCLIP3.51□□□□□ -1.85
USP44-208ENST00000552440 DUSP11O75319 330 aaKnown RBP3.51□□□□□ -1.85
USP44-208ENST00000552440 CTDNEP1O95476 244 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 GCGP01275 180 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 LIMS3P0CW19 117 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 LIMS4P0CW20 117 aa3.51□□□□□ -1.85
USP44-208ENST00000552440 IGHV4-30-4P0DP06 118 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms