RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 SLC35E2P0CK97 266 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 TIMP2P16035 220 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 RNF4P78317 190 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 ZNF345Q14585 488 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 COL19A1Q14993 1142 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 CST6Q15828 149 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 TMEM183BQ1AE95 376 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 ANKRD34AQ69YU3 496 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 OGFOD3Q6PK18 319 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 DOK3Q7L591 496 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 FJX1Q86VR8 437 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 PSMF1Q92530 271 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 PTDSS2Q9BVG9 487 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 SLC17A9Q9BYT1 436 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 PLEKHF2Q9H8W4 249 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 SIRT7Q9NRC8 400 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 UQCC1Q9NVA1 299 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 ZFP92A6NM28 416 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 SDHBP21912 280 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 OMGP23515 440 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 PLGLB1Q02325 96 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 COX19Q49B96 90 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 FAM74A1Q5RGS3 127 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 CARD17Q5XLA6 110 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 ABHD17CQ6PCB6 329 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 OR52E1Q8NGJ3 308 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 OR2G2Q8NGZ5 317 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 UBL7Q96S82 380 aaPredicted RBP11.71□□□□□ -0.53
PTCH1-212ENST00000546744 CREBZFQ9NS37 354 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 RNF186Q9NXI6 227 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 PLEKHB1Q9UF11 243 aaPredicted RBP11.71□□□□□ -0.53
PTCH1-212ENST00000546744 SLC5A6Q9Y289 635 aa11.71□□□□□ -0.53
PTCH1-212ENST00000546744 EXOGQ9Y2C4 368 aaKnown RBP11.71□□□□□ -0.53
PTCH1-212ENST00000546744 F5H5K5 113 aa11.71□□□□□ -0.54
PTCH1-212ENST00000546744 LILRB3O75022 631 aa11.71□□□□□ -0.54
PTCH1-212ENST00000546744 GP1BAP07359 652 aa11.71□□□□□ -0.54
PTCH1-212ENST00000546744 CD63P08962 238 aa11.71□□□□□ -0.54
PTCH1-212ENST00000546744 CYBAP13498 195 aa11.71□□□□□ -0.54
PTCH1-212ENST00000546744 DHODHQ02127 395 aa11.71□□□□□ -0.54
PTCH1-212ENST00000546744 RNF151Q2KHN1 245 aa11.71□□□□□ -0.54
PTCH1-212ENST00000546744 MARCH8Q5T0T0 291 aa11.71□□□□□ -0.54
PTCH1-212ENST00000546744 SFRP5Q5T4F7 317 aa11.71□□□□□ -0.54
PTCH1-212ENST00000546744 OR5L1Q8NGL2 311 aa11.71□□□□□ -0.54
PTCH1-212ENST00000546744 NPAS1Q99742 590 aa11.71□□□□□ -0.54
PTCH1-212ENST00000546744 RHNO1Q9BSD3 238 aa11.71□□□□□ -0.54
PTCH1-212ENST00000546744 CRLF2Q9HC73 371 aa11.71□□□□□ -0.54
PTCH1-212ENST00000546744 LYRM4Q9HD34 91 aa11.71□□□□□ -0.54
PTCH1-212ENST00000546744 ARGFXA6NJG6 315 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 ANKRD30BLA7E2S9 258 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 UPK1AO00322 258 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 SCAMP1O15126 338 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 ACTL6BO94805 426 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 IGLV3-25P01717 112 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 PMP2P02689 132 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 OPN1MWP04001 364 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 OPN1MW2P0DN77 364 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 OPN1MW3P0DN78 364 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 ZNF250P15622 560 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 MTCP1P56278 107 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 IRF3Q14653 427 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 TMEM182Q6ZP80 229 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-212ENST00000546744 TMPRSS9Q7Z410 1059 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 ANGPTL5Q86XS5 388 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 TECTBQ96PL2 329 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 KCNJ15Q99712 375 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 SMIM7Q9BQ49 75 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 PAAF1Q9BRP4 392 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 VAMP8Q9BV40 100 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 PRR14Q9BWN1 585 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 AUNIPQ9H7T9 357 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 A0A087X0M5 115 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 A0A1B0GX30 115 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 C17orf105B2RV13 164 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 G3V3Q6 166 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 SUSD5O60279 629 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 EIF4E2O60573 245 aaKnown RBP11.7□□□□□ -0.54
PTCH1-212ENST00000546744 TXNDC12O95881 172 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 SYT9Q86SS6 491 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 NKAIN4Q8IVV8 208 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 TCTEX1D1Q8N7M0 179 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 OR5M1Q8NGP8 315 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 OR13D1Q8NGV5 346 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 TMEM231Q9H6L2 316 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 TRBV5-4A0A0C4DH59 114 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 ASPDHA6ND91 283 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 TCAPO15273 167 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 TRAF3IP2O43734 574 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-212ENST00000546744 DUX1O43812 170 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 CST2P09228 141 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 RTP2Q5QGT7 225 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 NPSR1Q6W5P4 371 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 ZNF836Q6ZNA1 936 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 RNF175Q8N4F7 328 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 TMEM40Q8WWA1 233 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 RBM24Q9BX46 236 aaKnown RBP11.7□□□□□ -0.54
PTCH1-212ENST00000546744 C19orf53Q9UNZ5 99 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-212ENST00000546744 EMC9Q9Y3B6 208 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 ZNF646O15015 1829 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-212ENST00000546744 PEX12O00623 359 aa11.7□□□□□ -0.54
PTCH1-212ENST00000546744 PLPP1O14494 284 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms